Jatropha Genome Database

JcCB0259591.20
Show Alignment:  
BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCB0259591.20 - phase: 0 
         (445 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma02g44150.1                                                       614   e-176
Glyma17g10890.1                                                       536   e-152
Glyma05g01000.1                                                       529   e-150
Glyma17g32280.1                                                       144   2e-34

>Glyma02g44150.1 
          Length = 448

 Score =  614 bits (1584), Expect = e-176,   Method: Compositional matrix adjust.
 Identities = 301/442 (68%), Positives = 349/442 (78%), Gaps = 4/442 (0%)

Query: 5   QTQHFKPTFLCPLNT-RTNSKRRNVTIVSSLSGRKLRXXXXXXXXXXXXXXXXXXXXXIE 63
           QT    PTF  P +  +   K   +    S+SGRKLR                     +E
Sbjct: 6   QTSFCLPTFSIPTSKPKPYLKSFTIKASKSISGRKLRAAVIGGGPAGSSAAEALASGGVE 65

Query: 64  TFLFERST-STAKPCGGAIPLCMIDEFSIPLHLIDRHVTRMKIISPSNLTVDFGSKTLKP 122
           TFLFER+  S AKPCGGAIPLCM++EF IP HLIDRHVT M+I SPSN+ VDFG KTLKP
Sbjct: 66  TFLFERNPPSVAKPCGGAIPLCMLEEFDIPNHLIDRHVTHMRIFSPSNIAVDFG-KTLKP 124

Query: 123 HESIPMLRREVLDSFLRSRAQSNGAQLIPALVTHLEVPSSSTEPYIIHHTIN-NTKQTLA 181
           HE I MLRREVLDSFLRSRA + GA  I  LVT L++P+S   PY +H+T N +++++LA
Sbjct: 125 HEFIAMLRREVLDSFLRSRAHAAGATAISGLVTALDLPASPDAPYTVHYTANGSSRRSLA 184

Query: 182 VDVIIGADGANSKVAKSINAGNYTCAIAFQERIRLPDEKMEYYQNLAEMYVGDDVSPDFY 241
           VDV+IGADGANS+VAK+I AG+Y CAIAFQERI+LPDEKM YY+NLAEMYVGDDVSPDFY
Sbjct: 185 VDVVIGADGANSRVAKAIGAGDYACAIAFQERIKLPDEKMAYYENLAEMYVGDDVSPDFY 244

Query: 242 AWVFPKCDHVAVGTGTVCAKPDIKLYQKGIRERVRQKINGGKVIKVEAHPIPEHPRPVRV 301
           AWVFPKCDHVAVGTGTV +K DIKLYQ+GIRERV+ KINGGKVIKVEAHPIPEHPRPVRV
Sbjct: 245 AWVFPKCDHVAVGTGTVRSKKDIKLYQRGIRERVKPKINGGKVIKVEAHPIPEHPRPVRV 304

Query: 302 RGRVALVGDAAGYVTKCSGEGIYFAAKSGRMCGEAIVKASEGGEKRVKEEDLKRGYLKEW 361
           RGRVALVGDAAGYVTKCSGEGIYFAAKSGR+CG  +V+ASEGG++ + E DL+R YLK W
Sbjct: 305 RGRVALVGDAAGYVTKCSGEGIYFAAKSGRVCGNGVVRASEGGDRMIDECDLRREYLKPW 364

Query: 362 DKKYYSTFRFLDLLQRVFYGSNMAREALVELCGDEYVQRMTFDSYLYKKLANGDRWEDVK 421
           D +Y +TFRFLDLLQRVFYGSN  REALVELCGDEYVQRMTF+SYLYKKLA G   +  K
Sbjct: 365 DAEYANTFRFLDLLQRVFYGSNACREALVELCGDEYVQRMTFESYLYKKLARGRVLDHAK 424

Query: 422 MGLNTIGSLVRCRILGREMEAL 443
           + +NT+GSLVR +++   ME+ 
Sbjct: 425 LFMNTLGSLVRSKVVQTSMESF 446


>Glyma17g10890.1 
          Length = 462

 Score =  536 bits (1382), Expect = e-152,   Method: Compositional matrix adjust.
 Identities = 264/457 (57%), Positives = 329/457 (71%), Gaps = 16/457 (3%)

Query: 1   MSLTQTQHFKPTFLCPLNTRTNSKRRNVTIVSS-----LSGRKLRXXXXXXXXXXXXXXX 55
           + L Q+    P F     +R  +  R   +V+      L+GR LR               
Sbjct: 10  VGLRQSSPEAPHFAA--QSRPATPHRKFRVVAGKFSPRLNGRNLRVAVVGGGPAGGAAAE 67

Query: 56  XXXXXXIETFLFERSTSTAKPCGGAIPLCMIDEFSIPLHLIDRHVTRMKIISPSNLTVDF 115
                 +ETFL ER     KPCGGAIPLCM+ EF +PL +IDR VT+MK+ISPSN+ VD 
Sbjct: 68  TLAKGGVETFLIERKMDNCKPCGGAIPLCMVGEFDLPLDIIDRRVTKMKMISPSNVAVDI 127

Query: 116 GSKTLKPHESIPMLRREVLDSFLRSRAQSNGAQLIPALVTHLEVPSSSTEPYIIHHTINN 175
           G +TLKPHE I M+RREVLD++LR RA+ NGA +I  L   +++P  +  PY++H++  +
Sbjct: 128 G-RTLKPHEYIGMVRREVLDAYLRDRAKENGANVINGLFLKMDIPKDNNSPYVLHYSSYD 186

Query: 176 -------TKQTLAVDVIIGADGANSKVAKSINAGNYTCAIAFQERIRLPDEKMEYYQNLA 228
                   K+TL VD +IGADGANS+VAKSI+AG+Y  AIAFQER+R+PD+KM YY+NLA
Sbjct: 187 GKTNGAGEKRTLEVDAVIGADGANSRVAKSIDAGDYEYAIAFQERVRIPDDKMVYYENLA 246

Query: 229 EMYVGDDVSPDFYAWVFPKCDHVAVGTGTVCAKPDIKLYQKGIRERVRQKINGGKVIKVE 288
           EMYVGDDVSPDFY WVFPKCDHVAVGTGTV  K DIK +Q   R+R   KI GGK+I+VE
Sbjct: 247 EMYVGDDVSPDFYGWVFPKCDHVAVGTGTVTHKGDIKKFQLATRKRAEDKILGGKIIRVE 306

Query: 289 AHPIPEHPRPVRVRGRVALVGDAAGYVTKCSGEGIYFAAKSGRMCGEAIVKASEGGEKRV 348
           AHPIPEHPRP R+ GRVALVGDAAGYVTKCSGEGIYFAAKSGRMC EAIV+ SE G++ V
Sbjct: 307 AHPIPEHPRPRRLSGRVALVGDAAGYVTKCSGEGIYFAAKSGRMCAEAIVEGSENGKRMV 366

Query: 349 KEEDLKRGYLKEWDKKYYSTFRFLDLLQRVFYGSNMAREALVELCGDEYVQRMTFDSYLY 408
           +E DL++ YL++WDK Y+ T++ LD+LQ+VFY SN AREA VE+C DEYVQ+MTFDSYLY
Sbjct: 367 EEGDLRK-YLEKWDKTYWPTYKVLDILQKVFYRSNPAREAFVEMCADEYVQKMTFDSYLY 425

Query: 409 KKLANGDRWEDVKMGLNTIGSLVRCRILGREMEALKV 445
           K +  G+  ED+K+ +NTIGSLVR   + REM+ L V
Sbjct: 426 KTVVPGNPLEDLKLAINTIGSLVRANAIRREMKKLNV 462


>Glyma05g01000.1 
          Length = 462

 Score =  529 bits (1362), Expect = e-150,   Method: Compositional matrix adjust.
 Identities = 255/419 (60%), Positives = 313/419 (74%), Gaps = 9/419 (2%)

Query: 34  LSGRKLRXXXXXXXXXXXXXXXXXXXXXIETFLFERSTSTAKPCGGAIPLCMIDEFSIPL 93
           L+GR LR                     +ETFL ER     KPCGGAIPLCM+ EF +PL
Sbjct: 46  LNGRNLRVAVVGGGPAGGAAAETLAKGGVETFLIERKMDNCKPCGGAIPLCMVGEFDLPL 105

Query: 94  HLIDRHVTRMKIISPSNLTVDFGSKTLKPHESIPMLRREVLDSFLRSRAQSNGAQLIPAL 153
            +IDR VT+MK+ISPSN+ VD G +TLKPHE I M+RREVLD++LR RA+  GA +I  L
Sbjct: 106 DIIDRRVTKMKMISPSNVAVDIG-RTLKPHEYIGMVRREVLDAYLRDRAKEYGANVINGL 164

Query: 154 VTHLEVPSSSTEPYIIHHTINN-------TKQTLAVDVIIGADGANSKVAKSINAGNYTC 206
              +++P     PY++H++  +        K+TL VD +IGADGANS+VAKSI+AG+Y  
Sbjct: 165 FLKMDIPKDKNSPYVLHYSSYDGKTNGAGEKRTLEVDAVIGADGANSRVAKSIDAGDYEY 224

Query: 207 AIAFQERIRLPDEKMEYYQNLAEMYVGDDVSPDFYAWVFPKCDHVAVGTGTVCAKPDIKL 266
           AIAFQER+++PD+KM YY+NLAEMYVGDDVSPDFY WVFPKCDHVAVGTGTV  K DIK 
Sbjct: 225 AIAFQERVKIPDDKMVYYENLAEMYVGDDVSPDFYGWVFPKCDHVAVGTGTVTHKGDIKK 284

Query: 267 YQKGIRERVRQKINGGKVIKVEAHPIPEHPRPVRVRGRVALVGDAAGYVTKCSGEGIYFA 326
           +Q   R+R   KI GGK+I+VEAHPIPEHPRP R+ GRVALVGDAAGYVTKCSGEGIYFA
Sbjct: 285 FQLATRKRAEDKILGGKIIRVEAHPIPEHPRPRRLLGRVALVGDAAGYVTKCSGEGIYFA 344

Query: 327 AKSGRMCGEAIVKASEGGEKRVKEEDLKRGYLKEWDKKYYSTFRFLDLLQRVFYGSNMAR 386
           AKSGRMC EAIV+ SE G++ V+E DL++ YL++WDK Y+ T++ LD+LQ+VFY SN AR
Sbjct: 345 AKSGRMCAEAIVEGSENGKRMVEEGDLRK-YLEKWDKTYWPTYKVLDILQKVFYRSNPAR 403

Query: 387 EALVELCGDEYVQRMTFDSYLYKKLANGDRWEDVKMGLNTIGSLVRCRILGREMEALKV 445
           EA VE+C DEYVQ+MTFDSYLYK +  G+  ED+K+ +NTIGSLVR   + REM  L V
Sbjct: 404 EAFVEMCADEYVQKMTFDSYLYKTVVPGNPLEDLKLAINTIGSLVRANAIRREMNKLNV 462


>Glyma17g32280.1 
          Length = 103

 Score =  144 bits (363), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 74/111 (66%), Positives = 84/111 (75%), Gaps = 10/111 (9%)

Query: 322 GIYFAAKSGRMCGEAIVKASEGGEKRVKEEDLKRGYLKEWDKKYYSTFRFLDLLQRVFYG 381
           GIYFAAKSGR+CG  +VKASEGG+K + E DL+R YLK           FLDLL RVFYG
Sbjct: 1   GIYFAAKSGRVCGNGVVKASEGGDKMIGECDLRREYLKP----------FLDLLHRVFYG 50

Query: 382 SNMAREALVELCGDEYVQRMTFDSYLYKKLANGDRWEDVKMGLNTIGSLVR 432
           SN  REALVELCGDEYVQRMTF+SYLYKKLA G   +  K+ +NT+GSLVR
Sbjct: 51  SNACREALVELCGDEYVQRMTFESYLYKKLARGRVLDHAKLLMNTVGSLVR 101