Jatropha Genome Database

JcCB0257561.10
Show Alignment:  
BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCB0257561.10 - phase: 0 
         (163 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma08g45710.1                                                       225   1e-59

>Glyma08g45710.1 
          Length = 158

 Score =  225 bits (574), Expect = 1e-59,   Method: Compositional matrix adjust.
 Identities = 110/161 (68%), Positives = 129/161 (80%), Gaps = 5/161 (3%)

Query: 1   MAISTLQRLSSQFHRLPSFSPLTKSILVRXXXXXXXXXXXXXXKVADRIVKLFAVDLDGQ 60
           MA++ LQRLSSQ HRLPS S  +KS++                KVADRIV+L A+D  G+
Sbjct: 1   MAVANLQRLSSQVHRLPSVSFFSKSLIS-----RTSTSSSSTKKVADRIVRLSAIDFAGK 55

Query: 61  KREVVGLSGQTLLRALANCGLIDPASHRLEEIDACSAECEVSIAQEWLEKLPPRSYDEEY 120
           K EVVGL+GQTLL+AL N GL+DP SHRLEEIDAC+A CEV+IAQEWL+KLPPRSYDEEY
Sbjct: 56  KHEVVGLAGQTLLKALINTGLVDPESHRLEEIDACAAHCEVNIAQEWLDKLPPRSYDEEY 115

Query: 121 VLKRNSRARVLNKHARLGCQVVLTPDLKGMVVAIPEPKPWD 161
           VL RNSRARVLNKH+RLGCQV+L  DL+GMVVA+PEP+PWD
Sbjct: 116 VLVRNSRARVLNKHSRLGCQVLLDHDLEGMVVALPEPRPWD 156