Jatropha Genome Database

JcCB0256761.10
Show Alignment:  
BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCB0256761.10 - phase: 0 /partial
         (100 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma05g08320.1                                                       127   4e-30
Glyma17g12660.2                                                       124   2e-29
Glyma17g12660.1                                                       124   2e-29
Glyma14g01070.1                                                        80   6e-16

>Glyma05g08320.1 
          Length = 659

 Score =  127 bits (318), Expect = 4e-30,   Method: Composition-based stats.
 Identities = 63/100 (63%), Positives = 74/100 (74%), Gaps = 5/100 (5%)

Query: 2   DG-KIEISIDKLPVKRLEAIDENGAERFPTDVGYDEKRVSLIRRIDFAWAVXXXXXXXXX 60
           DG +++IS+DKLP+KRL++I+ENG ERFP DV YDEKR+SLIRRIDFAWAV         
Sbjct: 3   DGMQLQISLDKLPIKRLDSIEENGIERFPPDVDYDEKRLSLIRRIDFAWAV----EKDEE 58

Query: 61  XXXXXXXXXXXTTPWPWQSMVENLQLAHQELSIIIDLINT 100
                      +TPW WQ MVENLQLAHQELS+IIDLINT
Sbjct: 59  KKKKQKSSKETSTPWQWQGMVENLQLAHQELSVIIDLINT 98


>Glyma17g12660.2 
          Length = 554

 Score =  124 bits (311), Expect = 2e-29,   Method: Composition-based stats.
 Identities = 60/97 (61%), Positives = 71/97 (73%), Gaps = 3/97 (3%)

Query: 4   KIEISIDKLPVKRLEAIDENGAERFPTDVGYDEKRVSLIRRIDFAWAVXXXXXXXXXXXX 63
           +++IS+DKLP+KRL++I+ENG ERFP DV YDEKR+SLIRRIDFAWAV            
Sbjct: 6   QLQISLDKLPIKRLDSIEENGIERFPLDVDYDEKRLSLIRRIDFAWAV---EKDEEKKKK 62

Query: 64  XXXXXXXXTTPWPWQSMVENLQLAHQELSIIIDLINT 100
                   + PW WQ MVENLQLAHQELS+IIDLINT
Sbjct: 63  KQKSSKETSAPWQWQGMVENLQLAHQELSVIIDLINT 99


>Glyma17g12660.1 
          Length = 660

 Score =  124 bits (311), Expect = 2e-29,   Method: Composition-based stats.
 Identities = 60/97 (61%), Positives = 71/97 (73%), Gaps = 3/97 (3%)

Query: 4   KIEISIDKLPVKRLEAIDENGAERFPTDVGYDEKRVSLIRRIDFAWAVXXXXXXXXXXXX 63
           +++IS+DKLP+KRL++I+ENG ERFP DV YDEKR+SLIRRIDFAWAV            
Sbjct: 6   QLQISLDKLPIKRLDSIEENGIERFPLDVDYDEKRLSLIRRIDFAWAV---EKDEEKKKK 62

Query: 64  XXXXXXXXTTPWPWQSMVENLQLAHQELSIIIDLINT 100
                   + PW WQ MVENLQLAHQELS+IIDLINT
Sbjct: 63  KQKSSKETSAPWQWQGMVENLQLAHQELSVIIDLINT 99


>Glyma14g01070.1 
          Length = 628

 Score = 79.7 bits (195), Expect = 6e-16,   Method: Composition-based stats.
 Identities = 43/88 (48%), Positives = 53/88 (60%), Gaps = 7/88 (7%)

Query: 12 LPVKRLEAIDENGAERFPTDVGYDEKRVSLIRRIDFAWAVXXXXXXXXXXXXXXXXXXXX 71
          +P+K++E  D   A     D+ YD KR+SLIR+IDFAWAV                    
Sbjct: 18 IPLKKMELNDSRHA--ISKDLDYDAKRLSLIRQIDFAWAVEKDEEKKKQKSSRET----- 70

Query: 72 TTPWPWQSMVENLQLAHQELSIIIDLIN 99
          +T W WQ +VENLQLAHQELS+IIDLIN
Sbjct: 71 STTWQWQDLVENLQLAHQELSVIIDLIN 98