Jatropha Genome Database

JcCB0252341.10
Show Alignment:  
BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCB0252341.10 + phase: 1 /partial
         (100 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma18g32680.1                                                       136   5e-33
Glyma18g09430.1                                                       135   1e-32
Glyma08g46070.1                                                       135   1e-32
Glyma08g43690.1                                                       134   2e-32
Glyma03g21710.1                                                       117   3e-27
Glyma16g10700.1                                                       115   8e-27
Glyma17g18290.1                                                        99   1e-21
Glyma03g21710.2                                                        92   1e-19
Glyma19g23170.1                                                        49   9e-07

>Glyma18g32680.1 
          Length = 217

 Score =  136 bits (343), Expect = 5e-33,   Method: Compositional matrix adjust.
 Identities = 64/72 (88%), Positives = 67/72 (93%)

Query: 26  VKKSNHVLRKLEKRQQTRKLDPHIEEQFAGGRLMACISSRPGQCGRADGYILEGKELEFY 85
            KKSNHV RKLEKRQ+ RKLD HIEEQF GGRL+ACISSRPGQCGRADGYILEGKELEFY
Sbjct: 145 TKKSNHVQRKLEKRQKDRKLDSHIEEQFGGGRLLACISSRPGQCGRADGYILEGKELEFY 204

Query: 86  MKKIQRKKGKGA 97
           MKK+QRKKGKGA
Sbjct: 205 MKKLQRKKGKGA 216


>Glyma18g09430.1 
          Length = 219

 Score =  135 bits (339), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 62/69 (89%), Positives = 65/69 (94%)

Query: 18  EGEGATEEVKKSNHVLRKLEKRQQTRKLDPHIEEQFAGGRLMACISSRPGQCGRADGYIL 77
           +GE ATEEVKKSNHVLRKLEKR+Q R LDPHIEEQF GGRL+ACISSRPGQCGRADGYIL
Sbjct: 139 DGEAATEEVKKSNHVLRKLEKRKQNRVLDPHIEEQFGGGRLLACISSRPGQCGRADGYIL 198

Query: 78  EGKELEFYM 86
           EGKELEFYM
Sbjct: 199 EGKELEFYM 207


>Glyma08g46070.1 
          Length = 217

 Score =  135 bits (339), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 63/72 (87%), Positives = 66/72 (91%)

Query: 26  VKKSNHVLRKLEKRQQTRKLDPHIEEQFAGGRLMACISSRPGQCGRADGYILEGKELEFY 85
            KKSNHV RKLEKRQ+ R LD HIEEQF GGRL+ACISSRPGQCGRADGYILEGKELEFY
Sbjct: 145 TKKSNHVQRKLEKRQKDRNLDSHIEEQFGGGRLLACISSRPGQCGRADGYILEGKELEFY 204

Query: 86  MKKIQRKKGKGA 97
           MKK+QRKKGKGA
Sbjct: 205 MKKLQRKKGKGA 216


>Glyma08g43690.1 
          Length = 219

 Score =  134 bits (338), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 61/69 (88%), Positives = 65/69 (94%)

Query: 18  EGEGATEEVKKSNHVLRKLEKRQQTRKLDPHIEEQFAGGRLMACISSRPGQCGRADGYIL 77
           +GE ATEEVKKSNHV+RKLEKR+Q R LDPHIEEQF GGRL+ACISSRPGQCGRADGYIL
Sbjct: 139 DGEAATEEVKKSNHVVRKLEKRKQNRVLDPHIEEQFGGGRLLACISSRPGQCGRADGYIL 198

Query: 78  EGKELEFYM 86
           EGKELEFYM
Sbjct: 199 EGKELEFYM 207


>Glyma03g21710.1 
          Length = 220

 Score =  117 bits (293), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 54/60 (90%), Positives = 56/60 (93%)

Query: 27  KKSNHVLRKLEKRQQTRKLDPHIEEQFAGGRLMACISSRPGQCGRADGYILEGKELEFYM 86
           KKSNHV RKLEKRQ+ RKLD HIEEQF GGRL+ACISSRPGQCGRADGYILEGKELEFYM
Sbjct: 149 KKSNHVQRKLEKRQKDRKLDAHIEEQFGGGRLLACISSRPGQCGRADGYILEGKELEFYM 208


>Glyma16g10700.1 
          Length = 219

 Score =  115 bits (289), Expect = 8e-27,   Method: Compositional matrix adjust.
 Identities = 53/60 (88%), Positives = 56/60 (93%)

Query: 27  KKSNHVLRKLEKRQQTRKLDPHIEEQFAGGRLMACISSRPGQCGRADGYILEGKELEFYM 86
           KKSNH+ RKLEKRQ+ RKLD HIEEQF GGRL+ACISSRPGQCGRADGYILEGKELEFYM
Sbjct: 148 KKSNHLQRKLEKRQKDRKLDAHIEEQFGGGRLLACISSRPGQCGRADGYILEGKELEFYM 207


>Glyma17g18290.1 
          Length = 90

 Score = 99.0 bits (245), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 50/70 (71%), Positives = 56/70 (80%), Gaps = 1/70 (1%)

Query: 9  LFAHFKNF-TEGEGATEEVKKSNHVLRKLEKRQQTRKLDPHIEEQFAGGRLMACISSRPG 67
          +F   KN    GE ATEEVKKSNHVLRKLEK++Q + LDPHIEE+F GGRL+ACISSRPG
Sbjct: 4  VFTQQKNSKMNGEAATEEVKKSNHVLRKLEKQKQNQVLDPHIEEKFGGGRLLACISSRPG 63

Query: 68 QCGRADGYIL 77
          QCG AD  IL
Sbjct: 64 QCGCADRDIL 73


>Glyma03g21710.2 
          Length = 196

 Score = 92.0 bits (227), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 42/48 (87%), Positives = 44/48 (91%)

Query: 27  KKSNHVLRKLEKRQQTRKLDPHIEEQFAGGRLMACISSRPGQCGRADG 74
           KKSNHV RKLEKRQ+ RKLD HIEEQF GGRL+ACISSRPGQCGRADG
Sbjct: 149 KKSNHVQRKLEKRQKDRKLDAHIEEQFGGGRLLACISSRPGQCGRADG 196


>Glyma19g23170.1 
          Length = 47

 Score = 49.3 bits (116), Expect = 9e-07,   Method: Compositional matrix adjust.
 Identities = 22/27 (81%), Positives = 23/27 (85%)

Query: 49 IEEQFAGGRLMACISSRPGQCGRADGY 75
           EEQF GGRL+ACISSRPGQCG AD Y
Sbjct: 21 TEEQFGGGRLLACISSRPGQCGCADRY 47