Jatropha Genome Database
- JcCB0250351.10
BLASTP 2.2.23 [Feb-03-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= JcCB0250351.10 + phase: 0
(126 letters)
Database: Glyma1.pep
75,778 sequences; 25,431,882 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Glyma19g32300.1 51 3e-07
Glyma02g04330.1 49 1e-06
Glyma02g31420.1 48 3e-06
Glyma01g03240.1 47 4e-06
Glyma18g20760.1 47 4e-06
Glyma20g33250.1 46 7e-06
Glyma08g45050.1 46 9e-06
>Glyma19g32300.1
Length = 121
Score = 50.8 bits (120), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 28/63 (44%), Positives = 38/63 (60%), Gaps = 5/63 (7%)
Query: 53 CTTPTAKENKIPDVMTCPPAPKKRKASLAVGDNASNKVMATKEFFDSPVLDVMFDIGINK 112
C TP AK +IP+V TCPPAPKKR+ V N S+K + FF SP +++ F +
Sbjct: 64 CATPKAKRFRIPEVQTCPPAPKKRR----VVPNCSSK-RSPIAFFASPDIELFFFSALRN 118
Query: 113 VSS 115
VS+
Sbjct: 119 VSA 121
>Glyma02g04330.1
Length = 104
Score = 48.9 bits (115), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 24/53 (45%), Positives = 30/53 (56%), Gaps = 3/53 (5%)
Query: 54 TTPTAKENKIPDVMTCPPAPKKRKASLAVGDNASNKVMATKEFFDSPVLDVMF 106
TTP +E KIP + CPPAPKKRK SL ++EFF P L+ +F
Sbjct: 48 TTPKGEEAKIPTSLKCPPAPKKRKPSLKCNYRGGG---GSREFFTPPDLETVF 97
>Glyma02g31420.1
Length = 125
Score = 47.8 bits (112), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 28/70 (40%), Positives = 38/70 (54%), Gaps = 4/70 (5%)
Query: 53 CTTPTAKENKIPDVMTCPPAPKKRKASLAVGDNASNKVMATKEFFDSPVLDVMFDIGINK 112
C+TP K +IP+V+TCPPAPKKR+ + +A FF SP +++ F I K
Sbjct: 57 CSTPKGKRFRIPEVLTCPPAPKKRRVTSCSSSKNKRSPIA---FFASPDIELFFFSAI-K 112
Query: 113 VSSKVSGSTP 122
S S TP
Sbjct: 113 SSVPASSFTP 122
>Glyma01g03240.1
Length = 107
Score = 47.4 bits (111), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 24/61 (39%), Positives = 34/61 (55%), Gaps = 4/61 (6%)
Query: 54 TTPTAKENKIPDVMTCPPAPKKRKASLAVGDNASNKVMATKEFFDSPVLDVMFDIGINKV 113
TTP +E KIP + CPPAP+KRK SL + + +EFF P L+ +F + +
Sbjct: 51 TTPKGEEAKIPTTLKCPPAPRKRKPSL----KCNYRGGGAREFFTPPDLETVFIRHVERT 106
Query: 114 S 114
S
Sbjct: 107 S 107
>Glyma18g20760.1
Length = 119
Score = 47.4 bits (111), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 31/70 (44%), Positives = 38/70 (54%), Gaps = 6/70 (8%)
Query: 41 EKAKTETTTNLDC---TTPTAKENKIPDVMTCPPAPKKRK-ASLAVGDNASNKVMATKEF 96
EK + E DC TTPT E+KIP TCPPAP+KRK AS V+ +EF
Sbjct: 44 EKEQKEEVETEDCSSSTTPTNVESKIPTPFTCPPAPRKRKPASKKCNYRRGGGVV--REF 101
Query: 97 FDSPVLDVMF 106
F P L+ +F
Sbjct: 102 FTPPDLETVF 111
>Glyma20g33250.1
Length = 130
Score = 46.2 bits (108), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 30/77 (38%), Positives = 42/77 (54%), Gaps = 11/77 (14%)
Query: 22 AIREWEGEERENLIVDSVDEKAKTETTTNLDCTTPTAKENKIPDVMTCPPAPKKRKASLA 81
A+ + E E + VD V K E+ C TPT+KE+KIP MTCPPAP+K K +
Sbjct: 41 AVTQAEAENDGAITVD-VGVKVNDES-----CRTPTSKESKIPATMTCPPAPRKPKFA-- 92
Query: 82 VGDNASNKVMATKEFFD 98
+ K++ +FFD
Sbjct: 93 ---SCKRKLLEEFQFFD 106
>Glyma08g45050.1
Length = 185
Score = 46.2 bits (108), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 28/79 (35%), Positives = 42/79 (53%), Gaps = 5/79 (6%)
Query: 36 VDSVDEKAKTETTTNLDCTTPTAKENKIPDVMTCPPAPKKRKASLAVGDNASNKVMATKE 95
VD++ A+ N C+TP K+ +IP++ TCPPAPKK + V N S + +
Sbjct: 111 VDNMHGSAEVIDVCNSPCSTPKGKKFRIPEISTCPPAPKKPR----VLSNCSLR-RSPLS 165
Query: 96 FFDSPVLDVMFDIGINKVS 114
FF P L+ F + + VS
Sbjct: 166 FFAPPDLEHFFFVALRDVS 184