Jatropha Genome Database

JcCB0249431.10
Show Alignment:  
BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCB0249431.10 + phase: 0 /partial
         (196 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma11g19840.3                                                       228   3e-60
Glyma11g19840.2                                                       228   3e-60
Glyma11g19840.1                                                       228   3e-60
Glyma12g08650.1                                                       226   1e-59
Glyma12g30260.1                                                       203   8e-53
Glyma19g42890.2                                                       155   2e-38
Glyma19g42890.1                                                       155   2e-38
Glyma03g40280.3                                                       152   2e-37
Glyma03g40280.1                                                       152   2e-37
Glyma16g27020.2                                                       143   1e-34
Glyma16g27020.1                                                       136   1e-32
Glyma19g42890.3                                                       110   8e-25
Glyma03g40280.2                                                       107   7e-24
Glyma05g04170.1                                                        66   2e-11

>Glyma11g19840.3 
          Length = 203

 Score =  228 bits (582), Expect = 3e-60,   Method: Compositional matrix adjust.
 Identities = 118/160 (73%), Positives = 125/160 (78%), Gaps = 6/160 (3%)

Query: 35  FHGVSLKLPRQSLPLSXXXXXXXXXXXXXXXXXXXXXXXXXGTSNVEGVVTLTQEDDGPT 94
           F GVS+KL  QS+ LS                         GTS VEGV TL QEDDGPT
Sbjct: 26  FSGVSVKLTPQSITLSRSKPLTVFAATKKAVAVLK------GTSAVEGVATLIQEDDGPT 79

Query: 95  TVNVRVTGLTPGPHGFHLHEYGDTTNGCISTGAHFNPNNKTHGAPEDEIRHAGDLGNIVA 154
           TV+VR+TGLTPG HGFHLHEYGDTTNGCISTGAHFNPN  THGAPEDE+RHAGDLGNIVA
Sbjct: 80  TVSVRITGLTPGLHGFHLHEYGDTTNGCISTGAHFNPNKLTHGAPEDEVRHAGDLGNIVA 139

Query: 155 NADGVAEATIVDNQIPLSGPNAVVGRALVVHELEDDLGKG 194
           NA+GVAEATIVDNQIPLSGPN+VVGRALVVHELEDDLGKG
Sbjct: 140 NAEGVAEATIVDNQIPLSGPNSVVGRALVVHELEDDLGKG 179


>Glyma11g19840.2 
          Length = 204

 Score =  228 bits (581), Expect = 3e-60,   Method: Compositional matrix adjust.
 Identities = 118/160 (73%), Positives = 125/160 (78%), Gaps = 6/160 (3%)

Query: 35  FHGVSLKLPRQSLPLSXXXXXXXXXXXXXXXXXXXXXXXXXGTSNVEGVVTLTQEDDGPT 94
           F GVS+KL  QS+ LS                         GTS VEGV TL QEDDGPT
Sbjct: 26  FSGVSVKLTPQSITLSRSKPLTVFAATKKAVAVLK------GTSAVEGVATLIQEDDGPT 79

Query: 95  TVNVRVTGLTPGPHGFHLHEYGDTTNGCISTGAHFNPNNKTHGAPEDEIRHAGDLGNIVA 154
           TV+VR+TGLTPG HGFHLHEYGDTTNGCISTGAHFNPN  THGAPEDE+RHAGDLGNIVA
Sbjct: 80  TVSVRITGLTPGLHGFHLHEYGDTTNGCISTGAHFNPNKLTHGAPEDEVRHAGDLGNIVA 139

Query: 155 NADGVAEATIVDNQIPLSGPNAVVGRALVVHELEDDLGKG 194
           NA+GVAEATIVDNQIPLSGPN+VVGRALVVHELEDDLGKG
Sbjct: 140 NAEGVAEATIVDNQIPLSGPNSVVGRALVVHELEDDLGKG 179


>Glyma11g19840.1 
          Length = 209

 Score =  228 bits (581), Expect = 3e-60,   Method: Compositional matrix adjust.
 Identities = 118/160 (73%), Positives = 125/160 (78%), Gaps = 6/160 (3%)

Query: 35  FHGVSLKLPRQSLPLSXXXXXXXXXXXXXXXXXXXXXXXXXGTSNVEGVVTLTQEDDGPT 94
           F GVS+KL  QS+ LS                         GTS VEGV TL QEDDGPT
Sbjct: 26  FSGVSVKLTPQSITLSRSKPLTVFAATKKAVAVLK------GTSAVEGVATLIQEDDGPT 79

Query: 95  TVNVRVTGLTPGPHGFHLHEYGDTTNGCISTGAHFNPNNKTHGAPEDEIRHAGDLGNIVA 154
           TV+VR+TGLTPG HGFHLHEYGDTTNGCISTGAHFNPN  THGAPEDE+RHAGDLGNIVA
Sbjct: 80  TVSVRITGLTPGLHGFHLHEYGDTTNGCISTGAHFNPNKLTHGAPEDEVRHAGDLGNIVA 139

Query: 155 NADGVAEATIVDNQIPLSGPNAVVGRALVVHELEDDLGKG 194
           NA+GVAEATIVDNQIPLSGPN+VVGRALVVHELEDDLGKG
Sbjct: 140 NAEGVAEATIVDNQIPLSGPNSVVGRALVVHELEDDLGKG 179


>Glyma12g08650.1 
          Length = 204

 Score =  226 bits (576), Expect = 1e-59,   Method: Compositional matrix adjust.
 Identities = 125/195 (64%), Positives = 137/195 (70%), Gaps = 21/195 (10%)

Query: 1   MAAHTILAASP-SSHPLLYPFPNXXXXXXXXXXXXFHGVSLKLPRQSLPLSXXXXXXXXX 59
           +AA+ +++ SP   HPLL                 F GVS+KL  QS+  S         
Sbjct: 5   VAANAVVSPSPFRPHPLLR--------------SSFSGVSVKLTPQSITFSRLKPLTVFA 50

Query: 60  XXXXXXXXXXXXXXXXGTSNVEGVVTLTQEDDGPTTVNVRVTGLTPGPHGFHLHEYGDTT 119
                           GTS VEGV TL QEDDGPTTV+V +TGLTPG HGFHLHEYGDTT
Sbjct: 51  ATKKAVAVLK------GTSAVEGVATLIQEDDGPTTVSVSITGLTPGLHGFHLHEYGDTT 104

Query: 120 NGCISTGAHFNPNNKTHGAPEDEIRHAGDLGNIVANADGVAEATIVDNQIPLSGPNAVVG 179
           NGCISTGAHFNPNN THGAPEDE+RHAGDLGNIVANA+GVAEATIVDNQIPLSGPN+VVG
Sbjct: 105 NGCISTGAHFNPNNLTHGAPEDEVRHAGDLGNIVANAEGVAEATIVDNQIPLSGPNSVVG 164

Query: 180 RALVVHELEDDLGKG 194
           RALVVHELEDDLGKG
Sbjct: 165 RALVVHELEDDLGKG 179


>Glyma12g30260.1 
          Length = 183

 Score =  203 bits (517), Expect = 8e-53,   Method: Compositional matrix adjust.
 Identities = 101/120 (84%), Positives = 109/120 (90%), Gaps = 1/120 (0%)

Query: 76  GTSNVEGVVTLTQE-DDGPTTVNVRVTGLTPGPHGFHLHEYGDTTNGCISTGAHFNPNNK 134
           G S+V G+VTLTQ+ D+GPTTV VRV+GLTPGPHGFHLHE+GD TNGCISTG HFNPN  
Sbjct: 39  GNSSVHGLVTLTQQQDNGPTTVTVRVSGLTPGPHGFHLHEFGDITNGCISTGPHFNPNKL 98

Query: 135 THGAPEDEIRHAGDLGNIVANADGVAEATIVDNQIPLSGPNAVVGRALVVHELEDDLGKG 194
            HGAPED+IRHAGDLGNIVANADGVAEAT VDNQIPL GPN+VVGRALVVHELEDDLGKG
Sbjct: 99  KHGAPEDKIRHAGDLGNIVANADGVAEATTVDNQIPLIGPNSVVGRALVVHELEDDLGKG 158


>Glyma19g42890.2 
          Length = 152

 Score =  155 bits (392), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 74/118 (62%), Positives = 88/118 (74%)

Query: 77  TSNVEGVVTLTQEDDGPTTVNVRVTGLTPGPHGFHLHEYGDTTNGCISTGAHFNPNNKTH 136
           +  V G +  TQE +GPTTV   + GL PG HGFH+H  GDTTNGC+STGAHFNPNN  H
Sbjct: 11  SEGVTGTIFFTQEGNGPTTVTGSLAGLKPGLHGFHVHALGDTTNGCLSTGAHFNPNNNEH 70

Query: 137 GAPEDEIRHAGDLGNIVANADGVAEATIVDNQIPLSGPNAVVGRALVVHELEDDLGKG 194
           GAPEDE RHAGDLGN+    DG    +I D+QIPL+GPN+++GRA+VVH   DDLGKG
Sbjct: 71  GAPEDENRHAGDLGNVNVGDDGTVSFSITDSQIPLTGPNSIIGRAVVVHADSDDLGKG 128


>Glyma19g42890.1 
          Length = 152

 Score =  155 bits (392), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 74/118 (62%), Positives = 88/118 (74%)

Query: 77  TSNVEGVVTLTQEDDGPTTVNVRVTGLTPGPHGFHLHEYGDTTNGCISTGAHFNPNNKTH 136
           +  V G +  TQE +GPTTV   + GL PG HGFH+H  GDTTNGC+STGAHFNPNN  H
Sbjct: 11  SEGVTGTIFFTQEGNGPTTVTGSLAGLKPGLHGFHVHALGDTTNGCLSTGAHFNPNNNEH 70

Query: 137 GAPEDEIRHAGDLGNIVANADGVAEATIVDNQIPLSGPNAVVGRALVVHELEDDLGKG 194
           GAPEDE RHAGDLGN+    DG    +I D+QIPL+GPN+++GRA+VVH   DDLGKG
Sbjct: 71  GAPEDENRHAGDLGNVNVGDDGTVSFSITDSQIPLTGPNSIIGRAVVVHADSDDLGKG 128


>Glyma03g40280.3 
          Length = 152

 Score =  152 bits (385), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 74/118 (62%), Positives = 86/118 (72%)

Query: 77  TSNVEGVVTLTQEDDGPTTVNVRVTGLTPGPHGFHLHEYGDTTNGCISTGAHFNPNNKTH 136
           +  V G +   QE  GPTTV   + GL PG HGFH+H  GDTTNGC+STG+HFNPNNK H
Sbjct: 11  SEGVTGTIHFVQEGSGPTTVTGSLAGLKPGLHGFHVHALGDTTNGCLSTGSHFNPNNKEH 70

Query: 137 GAPEDEIRHAGDLGNIVANADGVAEATIVDNQIPLSGPNAVVGRALVVHELEDDLGKG 194
           GAPEDE RHAGDLGN+    DG    TI D+QIPL+GPN ++GRA+VVH   DDLGKG
Sbjct: 71  GAPEDENRHAGDLGNVNVGDDGTVSFTITDSQIPLTGPNNIIGRAVVVHADPDDLGKG 128


>Glyma03g40280.1 
          Length = 152

 Score =  152 bits (385), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 74/118 (62%), Positives = 86/118 (72%)

Query: 77  TSNVEGVVTLTQEDDGPTTVNVRVTGLTPGPHGFHLHEYGDTTNGCISTGAHFNPNNKTH 136
           +  V G +   QE  GPTTV   + GL PG HGFH+H  GDTTNGC+STG+HFNPNNK H
Sbjct: 11  SEGVTGTIHFVQEGSGPTTVTGSLAGLKPGLHGFHVHALGDTTNGCLSTGSHFNPNNKEH 70

Query: 137 GAPEDEIRHAGDLGNIVANADGVAEATIVDNQIPLSGPNAVVGRALVVHELEDDLGKG 194
           GAPEDE RHAGDLGN+    DG    TI D+QIPL+GPN ++GRA+VVH   DDLGKG
Sbjct: 71  GAPEDENRHAGDLGNVNVGDDGTVSFTITDSQIPLTGPNNIIGRAVVVHADPDDLGKG 128


>Glyma16g27020.2 
          Length = 160

 Score =  143 bits (361), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 71/119 (59%), Positives = 87/119 (73%)

Query: 76  GTSNVEGVVTLTQEDDGPTTVNVRVTGLTPGPHGFHLHEYGDTTNGCISTGAHFNPNNKT 135
           G +N+ G +   Q  +G T V  RVTGL+ G HGFH+H +GDTTNGC STG HFNP  K 
Sbjct: 16  GDNNIRGSLQFLQHPNGTTHVTGRVTGLSQGFHGFHIHAFGDTTNGCNSTGPHFNPFKKD 75

Query: 136 HGAPEDEIRHAGDLGNIVANADGVAEATIVDNQIPLSGPNAVVGRALVVHELEDDLGKG 194
           HGAP D+ RHAGDLGNI A  DGVAE +I D QIPL+G ++++GRA+VVH   DDLG+G
Sbjct: 76  HGAPSDDKRHAGDLGNIAAGPDGVAEISIRDRQIPLTGVHSIIGRAVVVHADPDDLGRG 134


>Glyma16g27020.1 
          Length = 167

 Score =  136 bits (343), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 71/126 (56%), Positives = 87/126 (69%), Gaps = 7/126 (5%)

Query: 76  GTSNVEGVVTLTQEDDGPTTVNVRVTGLTPGPHGFHLHEYGDTTNGCIST-------GAH 128
           G +N+ G +   Q  +G T V  RVTGL+ G HGFH+H +GDTTNGC ST       G H
Sbjct: 16  GDNNIRGSLQFLQHPNGTTHVTGRVTGLSQGFHGFHIHAFGDTTNGCNSTVLTSSTPGPH 75

Query: 129 FNPNNKTHGAPEDEIRHAGDLGNIVANADGVAEATIVDNQIPLSGPNAVVGRALVVHELE 188
           FNP  K HGAP D+ RHAGDLGNI A  DGVAE +I D QIPL+G ++++GRA+VVH   
Sbjct: 76  FNPFKKDHGAPSDDKRHAGDLGNIAAGPDGVAEISIRDRQIPLTGVHSIIGRAVVVHADP 135

Query: 189 DDLGKG 194
           DDLG+G
Sbjct: 136 DDLGRG 141


>Glyma19g42890.3 
          Length = 116

 Score =  110 bits (276), Expect = 8e-25,   Method: Compositional matrix adjust.
 Identities = 54/85 (63%), Positives = 61/85 (71%)

Query: 77  TSNVEGVVTLTQEDDGPTTVNVRVTGLTPGPHGFHLHEYGDTTNGCISTGAHFNPNNKTH 136
           +  V G +  TQE +GPTTV   + GL PG HGFH+H  GDTTNGC+STGAHFNPNN  H
Sbjct: 11  SEGVTGTIFFTQEGNGPTTVTGSLAGLKPGLHGFHVHALGDTTNGCLSTGAHFNPNNNEH 70

Query: 137 GAPEDEIRHAGDLGNIVANADGVAE 161
           GAPEDE RHAGDLGN+    DG  E
Sbjct: 71  GAPEDENRHAGDLGNVNVGDDGGHE 95


>Glyma03g40280.2 
          Length = 109

 Score =  107 bits (267), Expect = 7e-24,   Method: Compositional matrix adjust.
 Identities = 52/87 (59%), Positives = 60/87 (68%)

Query: 77  TSNVEGVVTLTQEDDGPTTVNVRVTGLTPGPHGFHLHEYGDTTNGCISTGAHFNPNNKTH 136
           +  V G +   QE  GPTTV   + GL PG HGFH+H  GDTTNGC+STG+HFNPNNK H
Sbjct: 11  SEGVTGTIHFVQEGSGPTTVTGSLAGLKPGLHGFHVHALGDTTNGCLSTGSHFNPNNKEH 70

Query: 137 GAPEDEIRHAGDLGNIVANADGVAEAT 163
           GAPEDE RHAGDLGN+    D  +  T
Sbjct: 71  GAPEDENRHAGDLGNVNVGDDDSSHWT 97


>Glyma05g04170.1 
          Length = 304

 Score = 66.2 bits (160), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 39/111 (35%), Positives = 62/111 (55%), Gaps = 8/111 (7%)

Query: 79  NVEGVVTLTQEDDGPTTVNVRVTGLTPGPHGFHLHEYGDTTNGCISTGAHFNPNNKTHGA 138
           ++ GVV L Q +     +    +GL+PG HG+ ++E+GD T G  STG  FNP N+    
Sbjct: 157 DIFGVVRLAQVNMELARIEANFSGLSPGKHGWSINEFGDLTRGAASTGKMFNPVNE---- 212

Query: 139 PEDEIRHAGDLGNIVANADGVAEATIVDNQIPLSGPNAVVGRALVVHELED 189
            E+     GDLG + AN  G A  + V  ++ ++    ++GR++VV+  ED
Sbjct: 213 -ENSKEPLGDLGTLEANEKGEAFYSGVKEKLRVAD---LIGRSVVVYATED 259