Jatropha Genome Database

JcCB0246261.10
Show Alignment:  
BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCB0246261.10 - phase: 0 /pseudo/partial
         (69 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma08g03210.1                                                       120   2e-28
Glyma08g03210.2                                                       120   2e-28
Glyma06g10540.1                                                        86   1e-17
Glyma05g36370.1                                                        67   5e-12

>Glyma08g03210.1 
          Length = 756

 Score =  120 bits (302), Expect = 2e-28,   Method: Composition-based stats.
 Identities = 53/61 (86%), Positives = 54/61 (88%)

Query: 1   LIAEAWDAGGLYQVGCFPHWQIWSEWNGKYRDIVRQFIKGTDGFSGAFAECLCGSPELIP 60
           LIAEAWDAGGLYQVG FPHW IWSEWNGKYRD VR FIKGTDGF+GAFAECLCGSP L  
Sbjct: 435 LIAEAWDAGGLYQVGTFPHWGIWSEWNGKYRDTVRLFIKGTDGFAGAFAECLCGSPNLYQ 494

Query: 61  G 61
           G
Sbjct: 495 G 495


>Glyma08g03210.2 
          Length = 630

 Score =  120 bits (302), Expect = 2e-28,   Method: Composition-based stats.
 Identities = 53/61 (86%), Positives = 54/61 (88%)

Query: 1   LIAEAWDAGGLYQVGCFPHWQIWSEWNGKYRDIVRQFIKGTDGFSGAFAECLCGSPELIP 60
           LIAEAWDAGGLYQVG FPHW IWSEWNGKYRD VR FIKGTDGF+GAFAECLCGSP L  
Sbjct: 435 LIAEAWDAGGLYQVGTFPHWGIWSEWNGKYRDTVRLFIKGTDGFAGAFAECLCGSPNLYQ 494

Query: 61  G 61
           G
Sbjct: 495 G 495


>Glyma06g10540.1 
          Length = 685

 Score = 85.9 bits (211), Expect = 1e-17,   Method: Composition-based stats.
 Identities = 36/58 (62%), Positives = 43/58 (74%)

Query: 1   LIAEAWDAGGLYQVGCFPHWQIWSEWNGKYRDIVRQFIKGTDGFSGAFAECLCGSPEL 58
           +IAE WD GGLY VG FP+W  W+EWNGKYRD VR+FIKG  G  G+FA  + GS +L
Sbjct: 392 IIAEPWDCGGLYLVGSFPNWDRWAEWNGKYRDDVRKFIKGDSGVKGSFATRVAGSSDL 449


>Glyma05g36370.1 
          Length = 399

 Score = 67.0 bits (162), Expect = 5e-12,   Method: Composition-based stats.
 Identities = 27/29 (93%), Positives = 27/29 (93%)

Query: 1  LIAEAWDAGGLYQVGCFPHWQIWSEWNGK 29
          LIAEAWDAGGLYQVG FPHW IWSEWNGK
Sbjct: 43 LIAEAWDAGGLYQVGTFPHWGIWSEWNGK 71