Jatropha Genome Database

JcCB0245051.10
Show Alignment:  
BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCB0245051.10 - phase: 0 /partial
         (73 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma08g04890.1                                                       141   2e-34
Glyma05g34790.1                                                       141   2e-34
Glyma10g38590.1                                                        84   3e-17
Glyma20g29230.1                                                        83   8e-17

>Glyma08g04890.1 
          Length = 582

 Score =  141 bits (356), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 67/73 (91%), Positives = 71/73 (97%)

Query: 1  MVVFKVSRVETTPFDGQKPGTSGLRKKVKVFVQPNYLHNFVQATFNALTAEKVRGATLVV 60
          MV+F VSRVETTPFDGQKPGTSGLRKKVKVFVQP+YLHNFVQ+TFNALT EKVRGATLVV
Sbjct: 1  MVLFNVSRVETTPFDGQKPGTSGLRKKVKVFVQPHYLHNFVQSTFNALTVEKVRGATLVV 60

Query: 61 SGDGRYFSKDAIQ 73
          SGDGRYFSK+AIQ
Sbjct: 61 SGDGRYFSKEAIQ 73


>Glyma05g34790.1 
          Length = 582

 Score =  141 bits (355), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 67/73 (91%), Positives = 71/73 (97%)

Query: 1  MVVFKVSRVETTPFDGQKPGTSGLRKKVKVFVQPNYLHNFVQATFNALTAEKVRGATLVV 60
          MV+F VSRVETTPFDGQKPGTSGLRKKVKVFVQP+YLHNFVQ+TFNALT EKVRGATLVV
Sbjct: 1  MVLFNVSRVETTPFDGQKPGTSGLRKKVKVFVQPHYLHNFVQSTFNALTVEKVRGATLVV 60

Query: 61 SGDGRYFSKDAIQ 73
          SGDGRYFSK+AIQ
Sbjct: 61 SGDGRYFSKEAIQ 73


>Glyma10g38590.1 
          Length = 628

 Score = 84.0 bits (206), Expect = 3e-17,   Method: Composition-based stats.
 Identities = 38/66 (57%), Positives = 49/66 (74%)

Query: 5   KVSRVETTPFDGQKPGTSGLRKKVKVFVQPNYLHNFVQATFNALTAEKVRGATLVVSGDG 64
           K+  + T P DGQK GTSGLRKKVKVF+Q NYL N++QA FN+L  E  +   LV+ GDG
Sbjct: 73  KIKSIPTKPIDGQKTGTSGLRKKVKVFMQDNYLANWIQALFNSLPPEDYKNGLLVLGGDG 132

Query: 65  RYFSKD 70
           RYF+++
Sbjct: 133 RYFNQE 138


>Glyma20g29230.1 
          Length = 628

 Score = 82.8 bits (203), Expect = 8e-17,   Method: Composition-based stats.
 Identities = 37/66 (56%), Positives = 49/66 (74%)

Query: 5   KVSRVETTPFDGQKPGTSGLRKKVKVFVQPNYLHNFVQATFNALTAEKVRGATLVVSGDG 64
           K+  + T P +GQK GTSGLRKKVKVF+Q NYL N++QA FN+L  E  +   LV+ GDG
Sbjct: 73  KIKSIPTKPIEGQKTGTSGLRKKVKVFMQDNYLANWIQALFNSLPPEDYKNGLLVLGGDG 132

Query: 65  RYFSKD 70
           RYF+++
Sbjct: 133 RYFNRE 138