Jatropha Genome Database

JcCB0244361.30
Show Alignment:  
BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCB0244361.30 + phase: 2 /pseudo/partial
         (103 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma15g03370.1                                                       166   5e-42
Glyma13g42020.1                                                       164   1e-41
Glyma06g46550.1                                                       108   2e-24
Glyma13g38740.1                                                       107   3e-24
Glyma12g31680.1                                                       104   2e-23
Glyma03g28580.1                                                        94   4e-20
Glyma19g31330.1                                                        92   9e-20
Glyma08g36350.1                                                        89   8e-19
Glyma03g28590.1                                                        79   2e-15
Glyma16g12090.1                                                        67   5e-12
Glyma06g23060.1                                                        64   4e-11
Glyma05g07630.1                                                        60   5e-10
Glyma17g09110.1                                                        59   9e-10

>Glyma15g03370.1 
          Length = 381

 Score =  166 bits (420), Expect = 5e-42,   Method: Compositional matrix adjust.
 Identities = 76/95 (80%), Positives = 86/95 (90%)

Query: 1   SEKLCSRGVDSTTSKQWKYERVCGRPLGLRFDKKTGNLYIADAYYGLMVVGPEGGLAIPL 60
           +EKLC RG DSTT KQWK+E+ CGRPLGLRFDK++G+LYIADAYYGL+VVGP GGLA  L
Sbjct: 99  TEKLCFRGNDSTTEKQWKHEKTCGRPLGLRFDKESGDLYIADAYYGLLVVGPNGGLATSL 158

Query: 61  ATHAGGKPILFANDLDLHENGSIFFTDTSKRYDRV 95
           ATH  GKPILFANDLD+H+NGSIFFTDTSKRY+RV
Sbjct: 159 ATHVEGKPILFANDLDIHKNGSIFFTDTSKRYNRV 193


>Glyma13g42020.1 
          Length = 403

 Score =  164 bits (416), Expect = 1e-41,   Method: Compositional matrix adjust.
 Identities = 76/95 (80%), Positives = 85/95 (89%)

Query: 1   SEKLCSRGVDSTTSKQWKYERVCGRPLGLRFDKKTGNLYIADAYYGLMVVGPEGGLAIPL 60
           +EKLC RG DSTT+KQWK+E+ CGRPLGLRFDK  G+LYIADAYYGL+VVGP GGLA  L
Sbjct: 121 TEKLCFRGNDSTTAKQWKHEKTCGRPLGLRFDKVNGDLYIADAYYGLLVVGPNGGLATSL 180

Query: 61  ATHAGGKPILFANDLDLHENGSIFFTDTSKRYDRV 95
           ATH  GKPILFANDLD+H+NGSIFFTDTSKRY+RV
Sbjct: 181 ATHVEGKPILFANDLDIHKNGSIFFTDTSKRYNRV 215


>Glyma06g46550.1 
          Length = 441

 Score =  108 bits (269), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 50/92 (54%), Positives = 66/92 (71%)

Query: 3   KLCSRGVDSTTSKQWKYERVCGRPLGLRFDKKTGNLYIADAYYGLMVVGPEGGLAIPLAT 62
           ++C+    +T     K E +CGRPLGLRFDKKTG+LYIADAY+GL+ VGPEGGLA  L T
Sbjct: 160 EICNPIASATPFSYVKNEHICGRPLGLRFDKKTGDLYIADAYFGLLKVGPEGGLATSLVT 219

Query: 63  HAGGKPILFANDLDLHENGSIFFTDTSKRYDR 94
            A G P+ F ND+D+   G+++FT++S  Y R
Sbjct: 220 EAEGIPLRFTNDVDVDTEGNVYFTESSALYPR 251


>Glyma13g38740.1 
          Length = 389

 Score =  107 bits (267), Expect = 3e-24,   Method: Compositional matrix adjust.
 Identities = 49/90 (54%), Positives = 65/90 (72%)

Query: 3   KLCSRGVDSTTSKQWKYERVCGRPLGLRFDKKTGNLYIADAYYGLMVVGPEGGLAIPLAT 62
           +LC+    ++     + E +CGRPLGLRFDK TG+LYIADAYYGLM VGP+GGLA  LAT
Sbjct: 101 ELCNPKESASPMSYVETEHICGRPLGLRFDKNTGDLYIADAYYGLMKVGPQGGLATSLAT 160

Query: 63  HAGGKPILFANDLDLHENGSIFFTDTSKRY 92
            A G P+ F ND+D+   G+++FTD+S  +
Sbjct: 161 EAEGVPLRFTNDVDIDTEGNLYFTDSSTNF 190


>Glyma12g31680.1 
          Length = 364

 Score =  104 bits (259), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 47/77 (61%), Positives = 60/77 (77%)

Query: 18  KYERVCGRPLGLRFDKKTGNLYIADAYYGLMVVGPEGGLAIPLATHAGGKPILFANDLDL 77
           K E +CGRPLGLRFDKK+G+LYIADAY+GLM VGP+GGLA  LAT A G P+ F  D+D+
Sbjct: 127 KTEHICGRPLGLRFDKKSGDLYIADAYFGLMKVGPQGGLATSLATEAEGVPLRFTIDVDI 186

Query: 78  HENGSIFFTDTSKRYDR 94
              G+++FTD+S  + R
Sbjct: 187 DTEGNLYFTDSSTNFQR 203


>Glyma03g28580.1 
          Length = 371

 Score = 94.0 bits (232), Expect = 4e-20,   Method: Compositional matrix adjust.
 Identities = 43/78 (55%), Positives = 57/78 (73%), Gaps = 1/78 (1%)

Query: 18  KYERVCGRPLGLRFDKKTGNLYIADAYYGLMVVGPEGGLAIPLATHAGGKPILFANDLDL 77
           + E +CGRPLGLRFDKK+G+LYIADAY GL VVG  GGLA  + T   G+P+ F ND+D+
Sbjct: 105 ELEHICGRPLGLRFDKKSGDLYIADAYLGLKVVGSTGGLATEVVTEVEGQPLQFTNDMDI 164

Query: 78  HENGS-IFFTDTSKRYDR 94
            E+   I+FTD++  + R
Sbjct: 165 SEDADVIYFTDSTTIFQR 182


>Glyma19g31330.1 
          Length = 371

 Score = 92.4 bits (228), Expect = 9e-20,   Method: Compositional matrix adjust.
 Identities = 43/78 (55%), Positives = 56/78 (71%), Gaps = 1/78 (1%)

Query: 18  KYERVCGRPLGLRFDKKTGNLYIADAYYGLMVVGPEGGLAIPLATHAGGKPILFANDLDL 77
           + E +CGRPLGLRFDKK G+LYIADAY GL VVG  GGLA  + T   G+P+ F ND+D+
Sbjct: 105 ELEHICGRPLGLRFDKKNGDLYIADAYLGLKVVGSAGGLATEVVTEVEGQPLQFTNDMDI 164

Query: 78  HENGS-IFFTDTSKRYDR 94
            E+   I+FTD++  + R
Sbjct: 165 SEDEEVIYFTDSTTIFQR 182


>Glyma08g36350.1 
          Length = 349

 Score = 89.4 bits (220), Expect = 8e-19,   Method: Compositional matrix adjust.
 Identities = 43/78 (55%), Positives = 55/78 (70%), Gaps = 1/78 (1%)

Query: 18  KYERVCGRPLGLRFDKKTGNLYIADAYYGLMVVGPEGGLAIPLATHAGGKPILFANDLDL 77
           K E +CGRPLGL+F+  T  LYIADAY+GL+VVGP GG+A  LAT A G P  F N LD+
Sbjct: 98  KMESMCGRPLGLKFNTVTCELYIADAYFGLLVVGPSGGVAKQLATSAEGVPFRFTNALDI 157

Query: 78  H-ENGSIFFTDTSKRYDR 94
             + G ++FTD+S  + R
Sbjct: 158 DTKTGEVYFTDSSILFQR 175


>Glyma03g28590.1 
          Length = 382

 Score = 78.6 bits (192), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 38/78 (48%), Positives = 52/78 (66%), Gaps = 1/78 (1%)

Query: 18  KYERVCGRPLGLRFDKKTGNLYIADAYYGLMVVGPEGGLAIPLATHAGGKPILFANDLDL 77
           K E VCGRPLGL F   + +LYIAD+Y GL+VVGP GG    L +   G+P+ F N LD+
Sbjct: 105 KKEHVCGRPLGLCFSTLSNDLYIADSYKGLVVVGPHGGTTRRLVSTIEGEPLAFTNGLDV 164

Query: 78  HE-NGSIFFTDTSKRYDR 94
            +  G+++FT +S +Y R
Sbjct: 165 DQRTGAVYFTSSSSKYPR 182


>Glyma16g12090.1 
          Length = 347

 Score = 66.6 bits (161), Expect = 5e-12,   Method: Compositional matrix adjust.
 Identities = 43/78 (55%), Positives = 55/78 (70%), Gaps = 1/78 (1%)

Query: 18  KYERVCGRPLGLRFDKKTGNLYIADAYYGLMVVGPEGGLAIPLATHAGGKPILFANDLDL 77
           K E +CGRPLGL+F+  T  LYIADAY+GL+VVGP GG+A  LAT A G P  F N LD+
Sbjct: 97  KMESMCGRPLGLKFNTLTCELYIADAYFGLLVVGPGGGVAKQLATSAEGVPFRFTNALDI 156

Query: 78  H-ENGSIFFTDTSKRYDR 94
             + G ++FTD+S  + R
Sbjct: 157 DTKTGEVYFTDSSIMFQR 174


>Glyma06g23060.1 
          Length = 337

 Score = 63.5 bits (153), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 35/86 (40%), Positives = 51/86 (59%), Gaps = 2/86 (2%)

Query: 20  ERVCGRPLGLRFDKKTGNLYIADAYYGLMVVGPEGGLAIPLATHA-GGKPILFANDLDLH 78
           +  CGRPLGL F  +TG L+IADAY GL+ V   GG A  L  HA G  P  F + +D+ 
Sbjct: 97  QETCGRPLGLSFYYQTGELFIADAYLGLVKVPYYGGAATQLVAHAQGSNPFGFLSGVDVE 156

Query: 79  -ENGSIFFTDTSKRYDRV*VKKKNKN 103
            + G+++FT+ S  +    +++  KN
Sbjct: 157 PDTGTVYFTEASSGFKLRDIRELLKN 182


>Glyma05g07630.1 
          Length = 342

 Score = 60.1 bits (144), Expect = 5e-10,   Method: Composition-based stats.
 Identities = 33/82 (40%), Positives = 45/82 (54%), Gaps = 11/82 (13%)

Query: 20  ERVCGRPLGLRFDKKTGNLYIADAYYGLMVVGPEGGLAIPLATHAGGKP--------ILF 71
           +  CGRPLGLRF+ +T  LY+ADAY GL+ +GP GG   P       +P        + F
Sbjct: 97  QATCGRPLGLRFNHQTNELYVADAYSGLIKIGPNGG--APTQCFKDIQPQQENVNTTLQF 154

Query: 72  ANDLDLHEN-GSIFFTDTSKRY 92
            + LD+  N G ++FT  S  Y
Sbjct: 155 LDGLDVDVNTGIVYFTQASANY 176


>Glyma17g09110.1 
          Length = 336

 Score = 59.3 bits (142), Expect = 9e-10,   Method: Composition-based stats.
 Identities = 33/82 (40%), Positives = 45/82 (54%), Gaps = 11/82 (13%)

Query: 20  ERVCGRPLGLRFDKKTGNLYIADAYYGLMVVGPEGGLAIPLATHAGGKP--------ILF 71
           +  CGRPLGLRF+ +T  LY+ADAY GL+ +GP GG   P       +P        + F
Sbjct: 91  QATCGRPLGLRFNHQTNELYVADAYSGLIKIGPNGG--APTQCFKDIQPQQENVNTTLGF 148

Query: 72  ANDLDLHEN-GSIFFTDTSKRY 92
            + LD+  N G ++FT  S  Y
Sbjct: 149 LDGLDVDVNSGVVYFTQASANY 170