Jatropha Genome Database

JcCB0240711.10
Show Alignment:  
BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCB0240711.10 + phase: 2 /partial
         (71 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma16g12080.2                                                       131   2e-31
Glyma16g12080.1                                                       131   2e-31
Glyma16g12080.3                                                       130   3e-31
Glyma08g36370.2                                                       108   1e-24
Glyma08g36370.1                                                       108   1e-24
Glyma02g14060.1                                                        91   3e-19
Glyma02g14040.1                                                        88   2e-18
Glyma02g14930.2                                                        65   2e-11
Glyma07g33530.1                                                        64   2e-11
Glyma02g14930.1                                                        62   2e-10

>Glyma16g12080.2 
          Length = 311

 Score =  131 bits (329), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 59/70 (84%), Positives = 67/70 (95%)

Query: 1   YEVVQTLDKQRHRVEGPIYYYVFNTLLYCLLVLHIYWWVLIYRMLVKQIQARGQISEDVR 60
           YEV+ TLDK++HRV+GPIYYYVFN+LLYCLLV+HIYWWVLIYRMLVKQIQARG++SEDVR
Sbjct: 239 YEVLLTLDKEKHRVDGPIYYYVFNSLLYCLLVMHIYWWVLIYRMLVKQIQARGKVSEDVR 298

Query: 61  SDSEGEDEHE 70
           SDSE ED HE
Sbjct: 299 SDSEDEDAHE 308


>Glyma16g12080.1 
          Length = 311

 Score =  131 bits (329), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 59/70 (84%), Positives = 67/70 (95%)

Query: 1   YEVVQTLDKQRHRVEGPIYYYVFNTLLYCLLVLHIYWWVLIYRMLVKQIQARGQISEDVR 60
           YEV+ TLDK++HRV+GPIYYYVFN+LLYCLLV+HIYWWVLIYRMLVKQIQARG++SEDVR
Sbjct: 239 YEVLLTLDKEKHRVDGPIYYYVFNSLLYCLLVMHIYWWVLIYRMLVKQIQARGKVSEDVR 298

Query: 61  SDSEGEDEHE 70
           SDSE ED HE
Sbjct: 299 SDSEDEDAHE 308


>Glyma16g12080.3 
          Length = 249

 Score =  130 bits (327), Expect = 3e-31,   Method: Compositional matrix adjust.
 Identities = 59/70 (84%), Positives = 67/70 (95%)

Query: 1   YEVVQTLDKQRHRVEGPIYYYVFNTLLYCLLVLHIYWWVLIYRMLVKQIQARGQISEDVR 60
           YEV+ TLDK++HRV+GPIYYYVFN+LLYCLLV+HIYWWVLIYRMLVKQIQARG++SEDVR
Sbjct: 177 YEVLLTLDKEKHRVDGPIYYYVFNSLLYCLLVMHIYWWVLIYRMLVKQIQARGKVSEDVR 236

Query: 61  SDSEGEDEHE 70
           SDSE ED HE
Sbjct: 237 SDSEDEDAHE 246


>Glyma08g36370.2 
          Length = 309

 Score =  108 bits (270), Expect = 1e-24,   Method: Composition-based stats.
 Identities = 49/60 (81%), Positives = 59/60 (98%)

Query: 1   YEVVQTLDKQRHRVEGPIYYYVFNTLLYCLLVLHIYWWVLIYRMLVKQIQARGQISEDVR 60
           YEV+ TLDK++H+V+GPIYYYVFN+LLYCLLV+HIYWWVLI+RMLVKQIQARG++SEDVR
Sbjct: 239 YEVLLTLDKEKHQVDGPIYYYVFNSLLYCLLVMHIYWWVLIFRMLVKQIQARGKVSEDVR 298


>Glyma08g36370.1 
          Length = 309

 Score =  108 bits (270), Expect = 1e-24,   Method: Composition-based stats.
 Identities = 49/60 (81%), Positives = 59/60 (98%)

Query: 1   YEVVQTLDKQRHRVEGPIYYYVFNTLLYCLLVLHIYWWVLIYRMLVKQIQARGQISEDVR 60
           YEV+ TLDK++H+V+GPIYYYVFN+LLYCLLV+HIYWWVLI+RMLVKQIQARG++SEDVR
Sbjct: 239 YEVLLTLDKEKHQVDGPIYYYVFNSLLYCLLVMHIYWWVLIFRMLVKQIQARGKVSEDVR 298


>Glyma02g14060.1 
          Length = 290

 Score = 90.5 bits (223), Expect = 3e-19,   Method: Composition-based stats.
 Identities = 44/63 (69%), Positives = 52/63 (82%), Gaps = 2/63 (3%)

Query: 1   YEVVQTLDKQRHRVEGPIYYYVFNTLLYCLLVLHIYWWVLIYRMLVKQIQARGQISEDVR 60
           YEVV  L  +   V+GP+YYYVFN LLY LLVLHIYWWVL+ RMLVKQIQ +G++SED+R
Sbjct: 220 YEVVHAL--KMDLVDGPLYYYVFNALLYFLLVLHIYWWVLMLRMLVKQIQEKGKVSEDIR 277

Query: 61  SDS 63
           SDS
Sbjct: 278 SDS 280


>Glyma02g14040.1 
          Length = 312

 Score = 88.2 bits (217), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 43/63 (68%), Positives = 52/63 (82%), Gaps = 2/63 (3%)

Query: 1   YEVVQTLDKQRHRVEGPIYYYVFNTLLYCLLVLHIYWWVLIYRMLVKQIQARGQISEDVR 60
           YEVV  L  +   V+GP+YYYVFN+LLY L VLHIYWWVL+ RMLVKQIQ +G++SED+R
Sbjct: 242 YEVVHAL--KMDLVDGPLYYYVFNSLLYFLQVLHIYWWVLMLRMLVKQIQEKGKVSEDIR 299

Query: 61  SDS 63
           SDS
Sbjct: 300 SDS 302


>Glyma02g14930.2 
          Length = 221

 Score = 65.1 bits (157), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 26/47 (55%), Positives = 38/47 (80%)

Query: 20  YYVFNTLLYCLLVLHIYWWVLIYRMLVKQIQARGQISEDVRSDSEGE 66
           YYVFNT+L  LL+ HIYWW LI  M+++Q++ RG++ ED+RSDS+ +
Sbjct: 175 YYVFNTMLIMLLIFHIYWWKLICAMILRQLKNRGKVGEDIRSDSDDD 221


>Glyma07g33530.1 
          Length = 243

 Score = 64.3 bits (155), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 26/47 (55%), Positives = 38/47 (80%)

Query: 20  YYVFNTLLYCLLVLHIYWWVLIYRMLVKQIQARGQISEDVRSDSEGE 66
           YYVFNT+L  LL+ HIYWW LI  M+++Q++ RG++ ED+RSDS+ +
Sbjct: 197 YYVFNTMLIMLLIFHIYWWKLICAMILRQLKNRGKVGEDIRSDSDDD 243


>Glyma02g14930.1 
          Length = 358

 Score = 61.6 bits (148), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 24/42 (57%), Positives = 34/42 (80%)

Query: 20  YYVFNTLLYCLLVLHIYWWVLIYRMLVKQIQARGQISEDVRS 61
           YYVFNT+L  LL+ HIYWW LI  M+++Q++ RG++ ED+RS
Sbjct: 312 YYVFNTMLIMLLIFHIYWWKLICAMILRQLKNRGKVGEDIRS 353