Jatropha Genome Database

JcCB0231741.10
Show Alignment:  
BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCB0231741.10 + phase: 0 /partial
         (681 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma08g07400.1                                                      1095   0.0  

>Glyma08g07400.1 
          Length = 1167

 Score = 1095 bits (2832), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 527/678 (77%), Positives = 591/678 (87%), Gaps = 23/678 (3%)

Query: 1   IAGAIIQAPQLDINTVAAGGGSKLKFQFGAFRVGPESVGAHPGPVCYRKGGQLAVTDANL 60
           IAGAIIQAPQLDINTVAAGGGSKLKFQFG F+ GPESVGAHPGPVCYRKGG+LA+TDANL
Sbjct: 265 IAGAIIQAPQLDINTVAAGGGSKLKFQFGTFQAGPESVGAHPGPVCYRKGGELAITDANL 324

Query: 61  ILGFVIPDYFPSIFGPHEDQPLDIEATREEFKKLAKQINSYRKSQDASAKDMTVEEIALG 120
           +LG+VIPDYFPSIFGP+EDQPLD ++TR EF+KLA+QIN++R++QD S+KDMTVEEIALG
Sbjct: 325 VLGYVIPDYFPSIFGPNEDQPLDFKSTRGEFEKLARQINTHRRNQDPSSKDMTVEEIALG 384

Query: 121 FVNVANETMCRPIRQLTEMKGHETRSHALACFGGAGPQHACAIARSLGMKEVLIHKFCGI 180
           FV+VANETMCRPIRQLTEMKGHET++H+LACFGGAGPQHACAIARSLGMKEVLIH+FCGI
Sbjct: 385 FVDVANETMCRPIRQLTEMKGHETKNHSLACFGGAGPQHACAIARSLGMKEVLIHRFCGI 444

Query: 181 LSAYGMGLADVVEEAQEPYSAVYGPESVLEASCREDMXXXXXXXXXXAQGFRGENITTET 240
           LSAYGMGLA+VVEEAQEPYSAVYG ES++E S RE +           QGF+ ENI+TET
Sbjct: 445 LSAYGMGLANVVEEAQEPYSAVYGVESIVEVSQREAVLLRQVKQKLQIQGFKEENISTET 504

Query: 241 YLNLRYEGTDTSIMVRRHVNEDGSAGDYAVEFVKLFQQEYGFKLQNRNIIICDVRVRGIG 300
           YLNLRYEGTDT+IMV+R V EDG+  DYA EFV+LFQQEYGFKLQNRNI+ICDVRVRGIG
Sbjct: 505 YLNLRYEGTDTAIMVKRQVAEDGNLCDYATEFVRLFQQEYGFKLQNRNIVICDVRVRGIG 564

Query: 301 VTNILKPQVLEPTPSSPKMEGHYKVYFRNGWHDAPLFKLENLGPGHIIVGPSIIMNGNST 360
           VTNIL+PQ +EP P SP +EG+YKVYF NGW + PL+KLE LG GH++ GP+IIMNGNST
Sbjct: 565 VTNILRPQAIEPAPGSPIVEGYYKVYFGNGWQETPLYKLEKLGYGHMMSGPAIIMNGNST 624

Query: 361 VIVEPNCNAVVTKYGNIKIEIGSNMSTEEVAENVADVVQLSIFNHRFMGIAEQMGRTLQR 420
           VIVEPNC A++TKYGNIKIEI S +++ ++++ VADVVQLSIFNHRFMGIAEQMGRTLQR
Sbjct: 625 VIVEPNCRAIITKYGNIKIEIESPLTSVKISDKVADVVQLSIFNHRFMGIAEQMGRTLQR 684

Query: 421 TSISTNIKERLDFSCALFGPDGGLVANAPHVPVHLGAMSSTVRWQLNYWGDNLKEGDVLV 480
           TSISTNIKERLDFSCALF P GGLVANAPHVPVHLGAMSSTV+WQLNYW           
Sbjct: 685 TSISTNIKERLDFSCALFDPSGGLVANAPHVPVHLGAMSSTVQWQLNYW----------- 733

Query: 481 TNHPCAGGSHLPDITVITPVFDKEKLVFFVASRGHHAEIGGITPGSMPPFSKSIWEEGAA 540
                  GSHLPDITVITPVF   KLVFFVA+RGHHAEIGG TPGSMPPFSKSI EEGAA
Sbjct: 734 -------GSHLPDITVITPVFFNGKLVFFVANRGHHAEIGGTTPGSMPPFSKSILEEGAA 786

Query: 541 IKAFKLVESGVFQEEGIIKLLKFPGSDELTYKIPGTRRLQDNLSDLHAQVAANQRGISLI 600
           IKAFKLVE G+FQEEGIIKLL+FP SD    KI GTRR+QDNLSDL AQVAANQRGISL+
Sbjct: 787 IKAFKLVEKGIFQEEGIIKLLQFPSSDGRGNKIAGTRRIQDNLSDLRAQVAANQRGISLV 846

Query: 601 KELIEQYGLDTVQAYMTYVQLNAEEAVREMLKSVAARVSNQPTVFRENNSVTIEEEEYMD 660
            ELIEQYGL+TVQAYM YVQ+NAE AVREMLKSV  R+S+     + N  VTIEEE+YMD
Sbjct: 847 LELIEQYGLETVQAYMNYVQVNAEAAVREMLKSVGHRISS-----KSNELVTIEEEDYMD 901

Query: 661 DGSVIHLKLTIDSDKGEA 678
           DGS+IHLKL+IDS+KGEA
Sbjct: 902 DGSIIHLKLSIDSNKGEA 919