Jatropha Genome Database

JcCB0229931.10
Show Alignment:  
BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCB0229931.10 + phase: 2 /partial
         (227 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma20g36750.1                                                       117   1e-26
Glyma10g30410.1                                                       113   1e-25
Glyma03g40730.1                                                       103   1e-22
Glyma19g43420.1                                                       100   1e-21
Glyma20g36750.2                                                        68   9e-12
Glyma04g08290.1                                                        58   9e-09
Glyma04g08290.2                                                        58   9e-09
Glyma06g08390.1                                                        56   3e-08
Glyma06g08390.2                                                        55   4e-08

>Glyma20g36750.1 
          Length = 403

 Score =  117 bits (292), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 66/177 (37%), Positives = 95/177 (53%), Gaps = 2/177 (1%)

Query: 45  LPALTSVQRKQEVPMRQXXXXXXXXXXXXXXXXXXXXXXXHLDPADEKRARRMQXXXXXX 104
           +P++ ++Q+K  V +R                        + DPAD KR RRM       
Sbjct: 172 IPSIPAMQKKPAVAIRPSTSGSSREQSDDEDIEGETSMNDNTDPADVKRVRRMLSNRESA 231

Query: 105 XXXXXXKQAQLNELEAQVGQXXXXXXXXXXXXXXINKKCDDASVDNRILNANIETLRTKV 164
                 KQA L +LE QV Q              +++K  D++VDNR+L A++ETLRTKV
Sbjct: 232 RRSRRRKQAHLTDLETQVSQLRGENSTLLKRLTDVSQKYSDSAVDNRVLKADVETLRTKV 291

Query: 165 KMAEDQVKRVTGLNPMLLARSNIPSLGMQFVAGQ--TDTSTNVAGPMQTNNNHFFHH 219
           KMAE+ VKR+TGLNP+L A S+I SLG+    G+  +DTS + A P+Q + +H F+ 
Sbjct: 292 KMAEETVKRITGLNPLLHAMSDISSLGLPSFDGRSPSDTSADAAVPVQDDPHHHFYQ 348


>Glyma10g30410.1 
          Length = 417

 Score =  113 bits (283), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 64/177 (36%), Positives = 93/177 (52%), Gaps = 2/177 (1%)

Query: 45  LPALTSVQRKQEVPMRQXXXXXXXXXXXXXXXXXXXXXXXHLDPADEKRARRMQXXXXXX 104
           +P++ ++Q+K  V +R                        + DPAD KR RRM       
Sbjct: 173 IPSIPAIQKKPAVAIRPSTSGSSREQSDDEDIEGETSMNDNTDPADVKRVRRMLSNRESA 232

Query: 105 XXXXXXKQAQLNELEAQVGQXXXXXXXXXXXXXXINKKCDDASVDNRILNANIETLRTKV 164
                 KQA L +LE QV Q              +++K  D++VDNR+L A++ETLR KV
Sbjct: 233 RRSRRRKQAHLTDLETQVSQLRGENSTLLKRLTDVSQKYSDSAVDNRVLKADVETLRAKV 292

Query: 165 KMAEDQVKRVTGLNPMLLARSNIPSLGMQFVAGQ--TDTSTNVAGPMQTNNNHFFHH 219
           KMAE+ VKR+TGLNPM  A S+I SLG+    G+  +DTS + + P+Q + +H F+ 
Sbjct: 293 KMAEETVKRITGLNPMPHAMSDISSLGLPSFDGRSPSDTSADASVPVQDDPHHHFYQ 349


>Glyma03g40730.1 
          Length = 414

 Score =  103 bits (258), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 58/139 (41%), Positives = 77/139 (55%), Gaps = 1/139 (0%)

Query: 86  LDPADEKRARRMQXXXXXXXXXXXXKQAQLNELEAQVGQXXXXXXXXXXXXXXINKKCDD 145
           + P D KR RRM             KQA L ELE QV Q              +++K  +
Sbjct: 220 MTPVDAKRVRRMLSNRESARRSRRRKQAHLTELETQVSQLRSENSSLLKRFTDVSQKYSN 279

Query: 146 ASVDNRILNANIETLRTKVKMAEDQVKRVTGLNPMLLARSNIPSLGMQ-FVAGQTDTSTN 204
           A+VDNR+L A++ETLR KVKMAE+ VKR+TGL+PML A + + SLGM  F    ++TS +
Sbjct: 280 AAVDNRVLKADVETLRAKVKMAEETVKRITGLSPMLHAMTEMSSLGMPLFDESPSETSAD 339

Query: 205 VAGPMQTNNNHFFHHSVPN 223
            A P+Q + NH       N
Sbjct: 340 AAVPVQEDPNHHLCQPTSN 358


>Glyma19g43420.1 
          Length = 341

 Score =  100 bits (250), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 60/163 (36%), Positives = 83/163 (50%), Gaps = 1/163 (0%)

Query: 45  LPALTSVQRKQEVPMRQXXXXXXXXXXXXXXXXXXXXXXXHLDPADEKRARRMQXXXXXX 104
           +P+ +S+Q K  V MR                        ++ P D KR RRM       
Sbjct: 131 IPSSSSMQNKPAVAMRPTISGSSGEQSDDEEVEGEINMTENMTPVDAKRVRRMLSNRESA 190

Query: 105 XXXXXXKQAQLNELEAQVGQXXXXXXXXXXXXXXINKKCDDASVDNRILNANIETLRTKV 164
                 KQA L ELE QV Q              +++K ++A+VDNR+L A++ETLRTKV
Sbjct: 191 RRSRRRKQAHLTELETQVSQLRSENSSLLKRFTDVSQKYNNAAVDNRVLKADVETLRTKV 250

Query: 165 KMAEDQVKRVTGLNPMLLARSNIPSLGM-QFVAGQTDTSTNVA 206
           KMAE+ VKR+TGLNPML A + + S+ M  F    ++TS + A
Sbjct: 251 KMAEETVKRITGLNPMLHAITEMSSMAMPSFDESPSETSADAA 293


>Glyma20g36750.2 
          Length = 303

 Score = 67.8 bits (164), Expect = 9e-12,   Method: Compositional matrix adjust.
 Identities = 39/122 (31%), Positives = 57/122 (46%)

Query: 45  LPALTSVQRKQEVPMRQXXXXXXXXXXXXXXXXXXXXXXXHLDPADEKRARRMQXXXXXX 104
           +P++ ++Q+K  V +R                        + DPAD KR RRM       
Sbjct: 172 IPSIPAMQKKPAVAIRPSTSGSSREQSDDEDIEGETSMNDNTDPADVKRVRRMLSNRESA 231

Query: 105 XXXXXXKQAQLNELEAQVGQXXXXXXXXXXXXXXINKKCDDASVDNRILNANIETLRTKV 164
                 KQA L +LE QV Q              +++K  D++VDNR+L A++ETLRTKV
Sbjct: 232 RRSRRRKQAHLTDLETQVSQLRGENSTLLKRLTDVSQKYSDSAVDNRVLKADVETLRTKV 291

Query: 165 KM 166
           K+
Sbjct: 292 KL 293


>Glyma04g08290.1 
          Length = 300

 Score = 57.8 bits (138), Expect = 9e-09,   Method: Compositional matrix adjust.
 Identities = 37/98 (37%), Positives = 49/98 (50%), Gaps = 2/98 (2%)

Query: 87  DPADEKRARRMQXXXXXXXXXXXXKQAQLNELEAQVGQXXXXXXXXXXXXXXINKKCDDA 146
           +PAD KR RR              KQAQL+ELE QV +               ++   +A
Sbjct: 125 NPADMKRLRRKVSNRDSARRSRRRKQAQLSELELQVEKLKVENATLYKQFTDASQHFREA 184

Query: 147 SVDNRILNANIETLRTKVKMAEDQVKR--VTGLNPMLL 182
             +NR+L +++E LR KVK+AED V R   T LN  LL
Sbjct: 185 DTNNRVLKSDVEALRAKVKLAEDMVTRSSFTTLNYQLL 222


>Glyma04g08290.2 
          Length = 257

 Score = 57.8 bits (138), Expect = 9e-09,   Method: Compositional matrix adjust.
 Identities = 37/98 (37%), Positives = 49/98 (50%), Gaps = 2/98 (2%)

Query: 87  DPADEKRARRMQXXXXXXXXXXXXKQAQLNELEAQVGQXXXXXXXXXXXXXXINKKCDDA 146
           +PAD KR RR              KQAQL+ELE QV +               ++   +A
Sbjct: 82  NPADMKRLRRKVSNRDSARRSRRRKQAQLSELELQVEKLKVENATLYKQFTDASQHFREA 141

Query: 147 SVDNRILNANIETLRTKVKMAEDQVKR--VTGLNPMLL 182
             +NR+L +++E LR KVK+AED V R   T LN  LL
Sbjct: 142 DTNNRVLKSDVEALRAKVKLAEDMVTRSSFTTLNYQLL 179


>Glyma06g08390.1 
          Length = 288

 Score = 55.8 bits (133), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 36/98 (36%), Positives = 49/98 (50%), Gaps = 2/98 (2%)

Query: 87  DPADEKRARRMQXXXXXXXXXXXXKQAQLNELEAQVGQXXXXXXXXXXXXXXINKKCDDA 146
           +PAD KR RR              KQAQL++LE QV +               ++   +A
Sbjct: 118 NPADMKRLRRKVSNRDSARRSRRRKQAQLSDLELQVEKLKVENATLYKQFTDASQHFREA 177

Query: 147 SVDNRILNANIETLRTKVKMAEDQVKR--VTGLNPMLL 182
             +NR+L +++E LR KVK+AED V R   T LN  LL
Sbjct: 178 DTNNRVLKSDVEALRAKVKLAEDMVTRSSFTTLNNQLL 215


>Glyma06g08390.2 
          Length = 252

 Score = 55.5 bits (132), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 36/98 (36%), Positives = 49/98 (50%), Gaps = 2/98 (2%)

Query: 87  DPADEKRARRMQXXXXXXXXXXXXKQAQLNELEAQVGQXXXXXXXXXXXXXXINKKCDDA 146
           +PAD KR RR              KQAQL++LE QV +               ++   +A
Sbjct: 82  NPADMKRLRRKVSNRDSARRSRRRKQAQLSDLELQVEKLKVENATLYKQFTDASQHFREA 141

Query: 147 SVDNRILNANIETLRTKVKMAEDQVKR--VTGLNPMLL 182
             +NR+L +++E LR KVK+AED V R   T LN  LL
Sbjct: 142 DTNNRVLKSDVEALRAKVKLAEDMVTRSSFTTLNNQLL 179