Jatropha Genome Database

JcCB0229861.10
Show Alignment:  
BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCB0229861.10 + phase: 0 /pseudo/partial
         (429 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma10g30620.1                                                       548   e-156
Glyma20g36930.1                                                       541   e-154

>Glyma10g30620.1 
          Length = 542

 Score =  548 bits (1412), Expect = e-156,   Method: Compositional matrix adjust.
 Identities = 259/324 (79%), Positives = 290/324 (89%)

Query: 106 RCGVLTVEIEHVDVATLEKLEQQGIDCQPKASTIKIIQDKYLQKVHFSRHGIPLPEFMQI 165
           RCGVLTVEIEHVDV TLEKLE+QG+DCQPKAST++IIQDKY QKVHFS+HGIPLPEFM+I
Sbjct: 48  RCGVLTVEIEHVDVDTLEKLEKQGVDCQPKASTVRIIQDKYQQKVHFSQHGIPLPEFMKI 107

Query: 166 NNLEGAKKAGDLFGYPLMIKSKRLAYDGRGNAVAKSEEELSFAVAALGGFDRGLYVEKWA 225
           ++ EGAKK G+LFGYPLMIKS+RLAYDGRGN V KSEEEL  AV ALGGF RGLY EKWA
Sbjct: 108 DDHEGAKKVGELFGYPLMIKSRRLAYDGRGNFVVKSEEELPSAVDALGGFGRGLYAEKWA 167

Query: 226 PFVKELAVIVARGRDNSIFCYPVVETIHKENICHIVKAPADVPWKIRKLATDVAHEAVSS 285
           PFVKELAVIVARGRDNSI CYPVVETIH++NICHIVKAPA+V WK R+LAT+VA  AV+S
Sbjct: 168 PFVKELAVIVARGRDNSISCYPVVETIHRDNICHIVKAPANVKWKTRELATEVAFNAVNS 227

Query: 286 LEGAGVFAVELFLTSEGQILLNEVAPRPHNSGHHTIESCYTSQFEQHLRAVVGLPLGDPS 345
           LEGAGVFAVELFLT +GQILLNEVAPRPHNSGHHTIESCYTSQ+EQHLRAVVGLPLGDPS
Sbjct: 228 LEGAGVFAVELFLTKDGQILLNEVAPRPHNSGHHTIESCYTSQYEQHLRAVVGLPLGDPS 287

Query: 346 MKTPAAIMYNLLGEDEGEPGFLLAQQLIGRALNVQGATVHWYDKPEMRKQRKMGHITITG 405
           +KTPAAIMYN+LGE+EG+ GF LA QLI RAL + GATVHWYDKPEMRKQRKMGHITI G
Sbjct: 288 LKTPAAIMYNILGEEEGDIGFQLAHQLIKRALTIPGATVHWYDKPEMRKQRKMGHITIVG 347

Query: 406 PSMGIVEARLNSMLKEQGPDGHSA 429
           PS+  +E+ L  +++ +  D  +A
Sbjct: 348 PSLSNIESNLAVVVEGKRLDDKTA 371


>Glyma20g36930.1 
          Length = 602

 Score =  541 bits (1395), Expect = e-154,   Method: Compositional matrix adjust.
 Identities = 255/324 (78%), Positives = 289/324 (89%)

Query: 106 RCGVLTVEIEHVDVATLEKLEQQGIDCQPKASTIKIIQDKYLQKVHFSRHGIPLPEFMQI 165
           RCGVLT+EIEHV+V TLEKLE+QG+DCQPKAST++IIQDKY QKVHFS+HGIPLPEFM+I
Sbjct: 108 RCGVLTIEIEHVNVDTLEKLEKQGVDCQPKASTVRIIQDKYQQKVHFSQHGIPLPEFMKI 167

Query: 166 NNLEGAKKAGDLFGYPLMIKSKRLAYDGRGNAVAKSEEELSFAVAALGGFDRGLYVEKWA 225
           ++LEGAKK G+LFGYPLMIKS+RLAYDGRGN V KSEEEL  AV ALGGF R LY EKWA
Sbjct: 168 DDLEGAKKVGELFGYPLMIKSRRLAYDGRGNFVVKSEEELPSAVDALGGFGRDLYAEKWA 227

Query: 226 PFVKELAVIVARGRDNSIFCYPVVETIHKENICHIVKAPADVPWKIRKLATDVAHEAVSS 285
           PFV+ELAVIVARGRDNSI CYPVVETIH++NICHIVKAPA++ WK R+LA++VA  AV+S
Sbjct: 228 PFVQELAVIVARGRDNSISCYPVVETIHRDNICHIVKAPANLKWKTRELASEVALNAVNS 287

Query: 286 LEGAGVFAVELFLTSEGQILLNEVAPRPHNSGHHTIESCYTSQFEQHLRAVVGLPLGDPS 345
           LEGAGVFAVELFLT +GQILLNEVAPRPHNSGHHTIESCYTSQ+EQHLRAVVGLPLGDPS
Sbjct: 288 LEGAGVFAVELFLTKDGQILLNEVAPRPHNSGHHTIESCYTSQYEQHLRAVVGLPLGDPS 347

Query: 346 MKTPAAIMYNLLGEDEGEPGFLLAQQLIGRALNVQGATVHWYDKPEMRKQRKMGHITITG 405
           +KTPAAIMYN+LGE+EG  GF LA QLI RAL   GATVHWYDKPEMRKQRKMGHITI G
Sbjct: 348 LKTPAAIMYNILGEEEGGLGFQLAHQLIKRALTFPGATVHWYDKPEMRKQRKMGHITIVG 407

Query: 406 PSMGIVEARLNSMLKEQGPDGHSA 429
           PS+  +E+ L  +++ +  DG +A
Sbjct: 408 PSLSNIESNLAVLVEGKELDGKTA 431