Jatropha Genome Database

JcCB0229331.10
Show Alignment:  
BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCB0229331.10 - phase: 0 
         (134 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma10g32850.1                                                       198   2e-51
Glyma10g32850.2                                                       119   7e-28
Glyma20g34790.1                                                       116   6e-27
Glyma09g05600.1                                                        50   4e-07
Glyma09g05600.4                                                        50   5e-07
Glyma09g05600.3                                                        50   5e-07
Glyma15g16870.1                                                        50   7e-07
Glyma09g05600.2                                                        49   1e-06
Glyma15g16870.2                                                        49   1e-06

>Glyma10g32850.1 
          Length = 464

 Score =  198 bits (503), Expect = 2e-51,   Method: Compositional matrix adjust.
 Identities = 99/132 (75%), Positives = 106/132 (80%), Gaps = 5/132 (3%)

Query: 1   MEDFSGYPIHEPFHXXXXXXXXXXXXVDDHGLQKQIDELSSFSDTPAPSVTRVLYTEKDV 60
           ME FSGY IHEP              VD   LQ QIDEL++FSD+PAPSVTRVLYT+KDV
Sbjct: 30  MEQFSGYKIHEPH-----SFQPSSLSVDAQALQNQIDELAAFSDSPAPSVTRVLYTDKDV 84

Query: 61  LARRYIKNLMGLSGLSVREDAVGNIFGRWDGSEPELAAVATGSHIDAIPFSGKYDGVVGV 120
           L RRY+K  M L+GLSVREDAVGNIFGRWDG EPELAAVATGSHIDAIP+SGKYDGVVGV
Sbjct: 85  LGRRYVKTQMELAGLSVREDAVGNIFGRWDGLEPELAAVATGSHIDAIPYSGKYDGVVGV 144

Query: 121 LGAIEAINVLKR 132
           LGAIEAI VLKR
Sbjct: 145 LGAIEAIRVLKR 156


>Glyma10g32850.2 
          Length = 371

 Score =  119 bits (299), Expect = 7e-28,   Method: Compositional matrix adjust.
 Identities = 58/63 (92%), Positives = 60/63 (95%)

Query: 70  MGLSGLSVREDAVGNIFGRWDGSEPELAAVATGSHIDAIPFSGKYDGVVGVLGAIEAINV 129
           M L+GLSVREDAVGNIFGRWDG EPELAAVATGSHIDAIP+SGKYDGVVGVLGAIEAI V
Sbjct: 1   MELAGLSVREDAVGNIFGRWDGLEPELAAVATGSHIDAIPYSGKYDGVVGVLGAIEAIRV 60

Query: 130 LKR 132
           LKR
Sbjct: 61  LKR 63


>Glyma20g34790.1 
          Length = 371

 Score =  116 bits (291), Expect = 6e-27,   Method: Compositional matrix adjust.
 Identities = 56/63 (88%), Positives = 59/63 (93%)

Query: 70  MGLSGLSVREDAVGNIFGRWDGSEPELAAVATGSHIDAIPFSGKYDGVVGVLGAIEAINV 129
           M L+GLSVREDAVGNIFGRWDG EPELAAVATGSHIDAIP+SGKYDGV+GVLGAIEAI V
Sbjct: 1   MELAGLSVREDAVGNIFGRWDGVEPELAAVATGSHIDAIPYSGKYDGVIGVLGAIEAIRV 60

Query: 130 LKR 132
            KR
Sbjct: 61  PKR 63


>Glyma09g05600.1 
          Length = 483

 Score = 50.4 bits (119), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 29/93 (31%), Positives = 47/93 (50%), Gaps = 1/93 (1%)

Query: 38  ELSSFSDTPAPSVTRVLYTEKDVLARRYIKNLMGLSGLSVREDAVGNIFGRWDGSEPELA 97
           EL   SD     + R   +   + A   I+  M  +GL    D +GN+ GR DG+     
Sbjct: 60  ELGKVSDASG-YLERTFLSPASMRAINLIRKWMEDAGLRTWVDQMGNVHGRVDGANANAE 118

Query: 98  AVATGSHIDAIPFSGKYDGVVGVLGAIEAINVL 130
           A+  GSH+D +  +G +DG +G++ AI A+  +
Sbjct: 119 ALLIGSHMDTVVDAGMFDGSLGIVSAISALKAM 151


>Glyma09g05600.4 
          Length = 311

 Score = 50.4 bits (119), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 29/93 (31%), Positives = 47/93 (50%), Gaps = 1/93 (1%)

Query: 38  ELSSFSDTPAPSVTRVLYTEKDVLARRYIKNLMGLSGLSVREDAVGNIFGRWDGSEPELA 97
           EL   SD     + R   +   + A   I+  M  +GL    D +GN+ GR DG+     
Sbjct: 60  ELGKVSDASG-YLERTFLSPASMRAINLIRKWMEDAGLRTWVDQMGNVHGRVDGANANAE 118

Query: 98  AVATGSHIDAIPFSGKYDGVVGVLGAIEAINVL 130
           A+  GSH+D +  +G +DG +G++ AI A+  +
Sbjct: 119 ALLIGSHMDTVVDAGMFDGSLGIVSAISALKAM 151


>Glyma09g05600.3 
          Length = 391

 Score = 50.4 bits (119), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 29/93 (31%), Positives = 47/93 (50%), Gaps = 1/93 (1%)

Query: 38  ELSSFSDTPAPSVTRVLYTEKDVLARRYIKNLMGLSGLSVREDAVGNIFGRWDGSEPELA 97
           EL   SD     + R   +   + A   I+  M  +GL    D +GN+ GR DG+     
Sbjct: 60  ELGKVSDASG-YLERTFLSPASMRAINLIRKWMEDAGLRTWVDQMGNVHGRVDGANANAE 118

Query: 98  AVATGSHIDAIPFSGKYDGVVGVLGAIEAINVL 130
           A+  GSH+D +  +G +DG +G++ AI A+  +
Sbjct: 119 ALLIGSHMDTVVDAGMFDGSLGIVSAISALKAM 151


>Glyma15g16870.1 
          Length = 483

 Score = 50.1 bits (118), Expect = 7e-07,   Method: Compositional matrix adjust.
 Identities = 29/93 (31%), Positives = 47/93 (50%), Gaps = 1/93 (1%)

Query: 38  ELSSFSDTPAPSVTRVLYTEKDVLARRYIKNLMGLSGLSVREDAVGNIFGRWDGSEPELA 97
           EL   SD     + R   +   + A   I+  M  +GL    D +GN+ GR DG+     
Sbjct: 60  ELGKVSDASG-YLERTFLSPASMKAIDLIRKWMEDAGLRTWVDQMGNVHGRVDGANENAE 118

Query: 98  AVATGSHIDAIPFSGKYDGVVGVLGAIEAINVL 130
           A+  GSH+D +  +G +DG +G++ AI A+  +
Sbjct: 119 ALLIGSHMDTVVDAGMFDGSLGIVSAISAVKAM 151


>Glyma09g05600.2 
          Length = 403

 Score = 48.9 bits (115), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 24/69 (34%), Positives = 39/69 (56%)

Query: 62  ARRYIKNLMGLSGLSVREDAVGNIFGRWDGSEPELAAVATGSHIDAIPFSGKYDGVVGVL 121
           A   I+  M  +GL    D +GN+ GR DG+     A+  GSH+D +  +G +DG +G++
Sbjct: 3   AINLIRKWMEDAGLRTWVDQMGNVHGRVDGANANAEALLIGSHMDTVVDAGMFDGSLGIV 62

Query: 122 GAIEAINVL 130
            AI A+  +
Sbjct: 63  SAISALKAM 71


>Glyma15g16870.2 
          Length = 403

 Score = 48.9 bits (115), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 23/65 (35%), Positives = 38/65 (58%)

Query: 66  IKNLMGLSGLSVREDAVGNIFGRWDGSEPELAAVATGSHIDAIPFSGKYDGVVGVLGAIE 125
           I+  M  +GL    D +GN+ GR DG+     A+  GSH+D +  +G +DG +G++ AI 
Sbjct: 7   IRKWMEDAGLRTWVDQMGNVHGRVDGANENAEALLIGSHMDTVVDAGMFDGSLGIVSAIS 66

Query: 126 AINVL 130
           A+  +
Sbjct: 67  AVKAM 71