Jatropha Genome Database

JcCB0227741.10
Show Alignment:  
BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCB0227741.10 - phase: 2 /partial
         (58 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma16g07150.1                                                       104   2e-23
Glyma19g23570.1                                                       103   3e-23

>Glyma16g07150.1 
          Length = 279

 Score =  104 bits (259), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 47/53 (88%), Positives = 50/53 (94%)

Query: 1   WISDSRDEYTNERLEAINDEFKLYRCHTILNCARACPKGLNPGKQIMNIKRLE 53
           WISDSRDEYT ERL+AINDEFKLYRCHTILNCARACPKGLNPGKQI +IK L+
Sbjct: 224 WISDSRDEYTKERLDAINDEFKLYRCHTILNCARACPKGLNPGKQISHIKSLQ 276


>Glyma19g23570.1 
          Length = 277

 Score =  103 bits (258), Expect = 3e-23,   Method: Compositional matrix adjust.
 Identities = 47/53 (88%), Positives = 50/53 (94%)

Query: 1   WISDSRDEYTNERLEAINDEFKLYRCHTILNCARACPKGLNPGKQIMNIKRLE 53
           WISDSRDEYT ERL+AINDEFKLYRCHTILNCARACPKGLNPGKQI +IK L+
Sbjct: 222 WISDSRDEYTKERLDAINDEFKLYRCHTILNCARACPKGLNPGKQISHIKSLQ 274