Jatropha Genome Database

JcCB0225841.10
Show Alignment:  
BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCB0225841.10 + phase: 0 /partial
         (165 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma08g07960.1                                                       302   9e-83
Glyma12g31100.2                                                       301   3e-82
Glyma12g31100.1                                                       301   3e-82
Glyma13g39210.1                                                       298   1e-81
Glyma07g30090.1                                                        57   8e-09

>Glyma08g07960.1 
          Length = 299

 Score =  302 bits (774), Expect = 9e-83,   Method: Compositional matrix adjust.
 Identities = 146/165 (88%), Positives = 150/165 (90%), Gaps = 9/165 (5%)

Query: 1   ELFEGYYFCQAQREDFFQRAKPYKGHPTILRMQKLAKELGVVIPVSFFEEANNAHYNSIA 60
           ELFEGYYFCQAQREDF QRAKP+K HPTILRMQKLAKELGVVIPVSFFEEANNAHYNSIA
Sbjct: 46  ELFEGYYFCQAQREDFIQRAKPHKDHPTILRMQKLAKELGVVIPVSFFEEANNAHYNSIA 105

Query: 61  IIDADGTDLGLYRKSHIPDGPGYQEKFYFNPGDTGFKVFQTKFAKIGV---------EAA 111
           IIDADGTDLG+YRKSHIPDGPGY+EKFYFNPGDTGFKVFQTK AKIGV         EAA
Sbjct: 106 IIDADGTDLGIYRKSHIPDGPGYEEKFYFNPGDTGFKVFQTKLAKIGVAICWDQWFPEAA 165

Query: 112 RAMVLQGAEILLYPTAIGSEPQDEGLDSRDHWKRVMQGHAGANLV 156
           RAMVLQGAEIL YPTAIGSEPQD  +DSRDHWKRVMQGHAGANLV
Sbjct: 166 RAMVLQGAEILFYPTAIGSEPQDGSIDSRDHWKRVMQGHAGANLV 210


>Glyma12g31100.2 
          Length = 299

 Score =  301 bits (770), Expect = 3e-82,   Method: Compositional matrix adjust.
 Identities = 145/165 (87%), Positives = 150/165 (90%), Gaps = 9/165 (5%)

Query: 1   ELFEGYYFCQAQREDFFQRAKPYKGHPTILRMQKLAKELGVVIPVSFFEEANNAHYNSIA 60
           ELFEGYYFCQAQR DFFQRAKP+K HPTILRMQKLAKELGVVIPVSFFEEANNAHYNSIA
Sbjct: 46  ELFEGYYFCQAQRVDFFQRAKPHKDHPTILRMQKLAKELGVVIPVSFFEEANNAHYNSIA 105

Query: 61  IIDADGTDLGLYRKSHIPDGPGYQEKFYFNPGDTGFKVFQTKFAKIGV---------EAA 111
           IID+DGTDLG+YRKSHIPDGPGY+EKFYFNPGDTGFKVFQTKFAKIGV         EAA
Sbjct: 106 IIDSDGTDLGIYRKSHIPDGPGYEEKFYFNPGDTGFKVFQTKFAKIGVAICWDQWFPEAA 165

Query: 112 RAMVLQGAEILLYPTAIGSEPQDEGLDSRDHWKRVMQGHAGANLV 156
           RAMVLQGAEIL YPTAIGSEP D  +DSRDHWKRVMQGHAGANLV
Sbjct: 166 RAMVLQGAEILFYPTAIGSEPHDGSIDSRDHWKRVMQGHAGANLV 210


>Glyma12g31100.1 
          Length = 299

 Score =  301 bits (770), Expect = 3e-82,   Method: Compositional matrix adjust.
 Identities = 145/165 (87%), Positives = 150/165 (90%), Gaps = 9/165 (5%)

Query: 1   ELFEGYYFCQAQREDFFQRAKPYKGHPTILRMQKLAKELGVVIPVSFFEEANNAHYNSIA 60
           ELFEGYYFCQAQR DFFQRAKP+K HPTILRMQKLAKELGVVIPVSFFEEANNAHYNSIA
Sbjct: 46  ELFEGYYFCQAQRVDFFQRAKPHKDHPTILRMQKLAKELGVVIPVSFFEEANNAHYNSIA 105

Query: 61  IIDADGTDLGLYRKSHIPDGPGYQEKFYFNPGDTGFKVFQTKFAKIGV---------EAA 111
           IID+DGTDLG+YRKSHIPDGPGY+EKFYFNPGDTGFKVFQTKFAKIGV         EAA
Sbjct: 106 IIDSDGTDLGIYRKSHIPDGPGYEEKFYFNPGDTGFKVFQTKFAKIGVAICWDQWFPEAA 165

Query: 112 RAMVLQGAEILLYPTAIGSEPQDEGLDSRDHWKRVMQGHAGANLV 156
           RAMVLQGAEIL YPTAIGSEP D  +DSRDHWKRVMQGHAGANLV
Sbjct: 166 RAMVLQGAEILFYPTAIGSEPHDGSIDSRDHWKRVMQGHAGANLV 210


>Glyma13g39210.1 
          Length = 299

 Score =  298 bits (764), Expect = 1e-81,   Method: Compositional matrix adjust.
 Identities = 143/165 (86%), Positives = 149/165 (90%), Gaps = 9/165 (5%)

Query: 1   ELFEGYYFCQAQREDFFQRAKPYKGHPTILRMQKLAKELGVVIPVSFFEEANNAHYNSIA 60
           ELFEGYYFCQAQRE+F QRAKP+K HPTILRMQKLAKELGVVIPVSFFEEANNAHYNS A
Sbjct: 46  ELFEGYYFCQAQREEFIQRAKPHKDHPTILRMQKLAKELGVVIPVSFFEEANNAHYNSTA 105

Query: 61  IIDADGTDLGLYRKSHIPDGPGYQEKFYFNPGDTGFKVFQTKFAKIGV---------EAA 111
           IIDADGTDLG+YRKSHIPDGPGY+EKFYFNPGDTGFKVFQTKFAK+GV         EAA
Sbjct: 106 IIDADGTDLGIYRKSHIPDGPGYEEKFYFNPGDTGFKVFQTKFAKVGVAICWDQWFPEAA 165

Query: 112 RAMVLQGAEILLYPTAIGSEPQDEGLDSRDHWKRVMQGHAGANLV 156
           RAMVLQGAEIL YPTAIGSEP D  +DSRDHWKRVMQGHAGANLV
Sbjct: 166 RAMVLQGAEILFYPTAIGSEPHDGSIDSRDHWKRVMQGHAGANLV 210


>Glyma07g30090.1 
          Length = 408

 Score = 57.0 bits (136), Expect = 8e-09,   Method: Compositional matrix adjust.
 Identities = 41/138 (29%), Positives = 63/138 (45%), Gaps = 14/138 (10%)

Query: 6   YYFCQAQREDFFQRAKPYKGHPTILRMQKLAKELGVVIPVSFFEEANN---AHYNSIAII 62
           + FC  ++  + + A+P  G  T   +Q  A +  +VI     E   N     +N+  +I
Sbjct: 143 FAFCTREKR-WCEFAEPVDGESTKF-LQSFALKYNMVIVSPILERDINHGEVIWNTAVVI 200

Query: 63  DADGTDLGLYRKSHIPDGPGYQEKFYFNPGDTGFKVFQTKFAKIGVEAA---------RA 113
              G  +G +RK+HIP    + E  Y+  G+TG  VF+T F KI +             A
Sbjct: 201 GNHGNIIGKHRKNHIPRVGDFNESTYYMEGNTGHPVFETAFGKIAINICYGRHHPLNWLA 260

Query: 114 MVLQGAEILLYPTAIGSE 131
             L GAEI+  P+A   E
Sbjct: 261 FGLNGAEIVFNPSATVGE 278