Jatropha Genome Database

JcCB0224631.10
Show Alignment:  
BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCB0224631.10 - phase: 2 /partial
         (262 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma03g31080.1                                                       150   2e-36
Glyma03g31110.1                                                        79   4e-15
Glyma19g33950.1                                                        68   9e-12
Glyma08g17470.1                                                        51   1e-06

>Glyma03g31080.1 
          Length = 671

 Score =  150 bits (378), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 79/185 (42%), Positives = 108/185 (58%), Gaps = 10/185 (5%)

Query: 1   WYEECNLGAFGVSKRELLYAYYMAAASIFEPERSKERVAWAKTTILLRTIDAYFNDNSNN 60
           WY E  L  FG+SK  LL AY++AAASIFEPERS ER+AWAKT  LL T+ ++  D    
Sbjct: 496 WYSEAGLEEFGLSKESLLSAYFIAAASIFEPERSPERLAWAKTAALLETLRSFIKDE--- 552

Query: 61  SVEERKDFVQQFKHGVGAPAGLVNGRKLETKTRQELVGIVLGTLNDVSLDALVAHGTDIS 120
             E +  FV  F + +  P    +  K   K  +EL+ I+L  L+ +  +    HG + S
Sbjct: 553 --ETKSAFVDLFNNSINGPD---HSNKQLNKREKELLEILLRNLDYLGFEMFRCHGQEFS 607

Query: 121 HSLRHAWEKWLTNWEKEGDRHQGEAELIVKTINLTTGRWVSEELLNYSSKYERFFQLTNR 180
           H L  AW  WL++W+ EG     EAELIV+ IN+  G W  E  LN   +Y+R  ++TNR
Sbjct: 608 HYLNQAWHGWLSSWKNEGTCFGREAELIVQIINVIAGYWSGELYLN--PQYQRLLEVTNR 665

Query: 181 ICHQL 185
           +CH+L
Sbjct: 666 VCHEL 670


>Glyma03g31110.1 
          Length = 525

 Score = 79.3 bits (194), Expect = 4e-15,   Method: Compositional matrix adjust.
 Identities = 38/72 (52%), Positives = 53/72 (73%), Gaps = 5/72 (6%)

Query: 1   WYEECNLGAFGVSKRELLYAYYMAAASIFEPERSKERVAWAKTTILLRTIDAYFNDNSNN 60
           WY E  L  FG+++R LL AY++AAASIFEPE+S+ R+AWA+T+ILL TI +Y +D    
Sbjct: 458 WYSESRLEEFGMNRRTLLLAYFVAAASIFEPEKSRVRLAWAQTSILLETITSYVSD---- 513

Query: 61  SVEERKDFVQQF 72
             E RK F+++F
Sbjct: 514 -AEMRKAFMKKF 524


>Glyma19g33950.1 
          Length = 525

 Score = 68.2 bits (165), Expect = 9e-12,   Method: Compositional matrix adjust.
 Identities = 40/72 (55%), Positives = 54/72 (75%), Gaps = 5/72 (6%)

Query: 1   WYEECNLGAFGVSKRELLYAYYMAAASIFEPERSKERVAWAKTTILLRTIDAYFNDNSNN 60
           WY E  LG FG+++R LL AY++AAASIFEPE+S  R+AWAKT++LL TI +Y +D    
Sbjct: 458 WYSESRLGEFGLNRRTLLLAYFLAAASIFEPEKSHVRLAWAKTSVLLETITSYVSD---- 513

Query: 61  SVEERKDFVQQF 72
             E RKDF+++F
Sbjct: 514 -AEMRKDFMKKF 524


>Glyma08g17470.1 
          Length = 739

 Score = 51.2 bits (121), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 24/70 (34%), Positives = 39/70 (55%), Gaps = 2/70 (2%)

Query: 1   WYEECNLGAFGVSKRELLYAYYMAAASIFEPERSKERVAWAKTTILLRTIDAYFNDNSNN 60
           W  E  L     ++++L Y Y+  AA+IF PE S  R++WAK+ +L   +D +F  +   
Sbjct: 419 WVVERRLDTLKFARQKLAYCYFSCAATIFSPELSDARISWAKSGVLTTVVDDFF--DVGG 476

Query: 61  SVEERKDFVQ 70
           S EE  + +Q
Sbjct: 477 SEEEHVNLIQ 486