Jatropha Genome Database

JcCB0220081.10
Show Alignment:  
BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCB0220081.10 - phase: 0 /partial
         (296 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma13g40140.2                                                       522   e-148
Glyma13g40140.1                                                       522   e-148
Glyma12g29590.1                                                       519   e-147
Glyma12g29590.2                                                       390   e-109
Glyma14g14430.1                                                       109   3e-24

>Glyma13g40140.2 
          Length = 742

 Score =  522 bits (1344), Expect = e-148,   Method: Compositional matrix adjust.
 Identities = 250/296 (84%), Positives = 272/296 (91%)

Query: 1   DLATVDSILLRELPPVEDSDARLALKRLIDISMGVITPLSEQLTKPLPNAMVLVNLKEIA 60
           DLATVDSILLRELPPV+D+DARLALKRLIDISMGVITPL+EQLTKPLPNAMVLVNLKEI+
Sbjct: 447 DLATVDSILLRELPPVDDADARLALKRLIDISMGVITPLTEQLTKPLPNAMVLVNLKEIS 506

Query: 61  TGAYKLLPEGTRLVVSVRGDESYEELEILKDIDATMILHDLPFTEDKIGRVHAARRLFEF 120
           TGAYKLLP+GTRLVVSVRGDE YEEL+ILK +DATM+LHDLP+TED+I RVHAARRLFE+
Sbjct: 507 TGAYKLLPQGTRLVVSVRGDEPYEELDILKGVDATMLLHDLPYTEDRISRVHAARRLFEY 566

Query: 121 LSDHALNFPVIHHIQFPNAIHRDDLVIGAGTNXXXXXXXXXXXXXXXEAPGQDFDFLRNT 180
           LSD++LNFPVIHHIQFPN IHRDDLVIGAG++               EAP +DF+F+RNT
Sbjct: 567 LSDNSLNFPVIHHIQFPNGIHRDDLVIGAGSDAGALLVDGLGDGLLLEAPDKDFEFIRNT 626

Query: 181 SFNLLQGCRMRNTKTEYVSCPSCGRTLFDLQEISAEIREKTSHLPGVSIAIMGCIVNGPG 240
           SFNLLQGCRMRNTKTEYVSCPSCGRTLFDLQE+SA+IREKTSHLPGVSIAIMGCIVNGPG
Sbjct: 627 SFNLLQGCRMRNTKTEYVSCPSCGRTLFDLQEVSAQIREKTSHLPGVSIAIMGCIVNGPG 686

Query: 241 EMADADFGYVGGAPGKIDLYVGKTVVKRGIDMEGATDALIQLIKDHGRWVDPPAEE 296
           EMADADFGYVGG PGKIDLYVGKTVVKRGI ME AT+ALI LIK+HGRWVDPPAEE
Sbjct: 687 EMADADFGYVGGTPGKIDLYVGKTVVKRGIAMEHATNALIDLIKEHGRWVDPPAEE 742


>Glyma13g40140.1 
          Length = 742

 Score =  522 bits (1344), Expect = e-148,   Method: Compositional matrix adjust.
 Identities = 250/296 (84%), Positives = 272/296 (91%)

Query: 1   DLATVDSILLRELPPVEDSDARLALKRLIDISMGVITPLSEQLTKPLPNAMVLVNLKEIA 60
           DLATVDSILLRELPPV+D+DARLALKRLIDISMGVITPL+EQLTKPLPNAMVLVNLKEI+
Sbjct: 447 DLATVDSILLRELPPVDDADARLALKRLIDISMGVITPLTEQLTKPLPNAMVLVNLKEIS 506

Query: 61  TGAYKLLPEGTRLVVSVRGDESYEELEILKDIDATMILHDLPFTEDKIGRVHAARRLFEF 120
           TGAYKLLP+GTRLVVSVRGDE YEEL+ILK +DATM+LHDLP+TED+I RVHAARRLFE+
Sbjct: 507 TGAYKLLPQGTRLVVSVRGDEPYEELDILKGVDATMLLHDLPYTEDRISRVHAARRLFEY 566

Query: 121 LSDHALNFPVIHHIQFPNAIHRDDLVIGAGTNXXXXXXXXXXXXXXXEAPGQDFDFLRNT 180
           LSD++LNFPVIHHIQFPN IHRDDLVIGAG++               EAP +DF+F+RNT
Sbjct: 567 LSDNSLNFPVIHHIQFPNGIHRDDLVIGAGSDAGALLVDGLGDGLLLEAPDKDFEFIRNT 626

Query: 181 SFNLLQGCRMRNTKTEYVSCPSCGRTLFDLQEISAEIREKTSHLPGVSIAIMGCIVNGPG 240
           SFNLLQGCRMRNTKTEYVSCPSCGRTLFDLQE+SA+IREKTSHLPGVSIAIMGCIVNGPG
Sbjct: 627 SFNLLQGCRMRNTKTEYVSCPSCGRTLFDLQEVSAQIREKTSHLPGVSIAIMGCIVNGPG 686

Query: 241 EMADADFGYVGGAPGKIDLYVGKTVVKRGIDMEGATDALIQLIKDHGRWVDPPAEE 296
           EMADADFGYVGG PGKIDLYVGKTVVKRGI ME AT+ALI LIK+HGRWVDPPAEE
Sbjct: 687 EMADADFGYVGGTPGKIDLYVGKTVVKRGIAMEHATNALIDLIKEHGRWVDPPAEE 742


>Glyma12g29590.1 
          Length = 741

 Score =  519 bits (1337), Expect = e-147,   Method: Compositional matrix adjust.
 Identities = 250/296 (84%), Positives = 271/296 (91%)

Query: 1   DLATVDSILLRELPPVEDSDARLALKRLIDISMGVITPLSEQLTKPLPNAMVLVNLKEIA 60
           DLATVDSILLRE+PPV+D+DARLALKRLIDISMGVITPLSEQLTKPLPNAMVLVNLKEI+
Sbjct: 446 DLATVDSILLREVPPVDDADARLALKRLIDISMGVITPLSEQLTKPLPNAMVLVNLKEIS 505

Query: 61  TGAYKLLPEGTRLVVSVRGDESYEELEILKDIDATMILHDLPFTEDKIGRVHAARRLFEF 120
           + AYKLLP+GTRLVVSVRGDE YEEL+ILK IDATM+LHDLP+TEDKI RVHAARRLFE+
Sbjct: 506 SRAYKLLPQGTRLVVSVRGDEPYEELDILKGIDATMLLHDLPYTEDKISRVHAARRLFEY 565

Query: 121 LSDHALNFPVIHHIQFPNAIHRDDLVIGAGTNXXXXXXXXXXXXXXXEAPGQDFDFLRNT 180
           LSD++LNFPVIHHIQFPN IHRDDLVIGAG++               EAP +DF+F+RNT
Sbjct: 566 LSDNSLNFPVIHHIQFPNGIHRDDLVIGAGSDAGALLVDGLGDGLLLEAPDKDFEFIRNT 625

Query: 181 SFNLLQGCRMRNTKTEYVSCPSCGRTLFDLQEISAEIREKTSHLPGVSIAIMGCIVNGPG 240
           SFNLLQGCRMRNTKTEYVSCPSCGRTLFDLQE+SA+IREKTSHLPGVSIAIMGCIVNGPG
Sbjct: 626 SFNLLQGCRMRNTKTEYVSCPSCGRTLFDLQEVSAQIREKTSHLPGVSIAIMGCIVNGPG 685

Query: 241 EMADADFGYVGGAPGKIDLYVGKTVVKRGIDMEGATDALIQLIKDHGRWVDPPAEE 296
           EMADADFGYVGG PGKIDLYVGKTVVKRGI ME AT+ALI LIK+HGRWVDPPAEE
Sbjct: 686 EMADADFGYVGGTPGKIDLYVGKTVVKRGIAMEHATNALIDLIKEHGRWVDPPAEE 741


>Glyma12g29590.2 
          Length = 681

 Score =  390 bits (1003), Expect = e-109,   Method: Compositional matrix adjust.
 Identities = 188/229 (82%), Positives = 208/229 (90%)

Query: 1   DLATVDSILLRELPPVEDSDARLALKRLIDISMGVITPLSEQLTKPLPNAMVLVNLKEIA 60
           DLATVDSILLRE+PPV+D+DARLALKRLIDISMGVITPLSEQLTKPLPNAMVLVNLKEI+
Sbjct: 446 DLATVDSILLREVPPVDDADARLALKRLIDISMGVITPLSEQLTKPLPNAMVLVNLKEIS 505

Query: 61  TGAYKLLPEGTRLVVSVRGDESYEELEILKDIDATMILHDLPFTEDKIGRVHAARRLFEF 120
           + AYKLLP+GTRLVVSVRGDE YEEL+ILK IDATM+LHDLP+TEDKI RVHAARRLFE+
Sbjct: 506 SRAYKLLPQGTRLVVSVRGDEPYEELDILKGIDATMLLHDLPYTEDKISRVHAARRLFEY 565

Query: 121 LSDHALNFPVIHHIQFPNAIHRDDLVIGAGTNXXXXXXXXXXXXXXXEAPGQDFDFLRNT 180
           LSD++LNFPVIHHIQFPN IHRDDLVIGAG++               EAP +DF+F+RNT
Sbjct: 566 LSDNSLNFPVIHHIQFPNGIHRDDLVIGAGSDAGALLVDGLGDGLLLEAPDKDFEFIRNT 625

Query: 181 SFNLLQGCRMRNTKTEYVSCPSCGRTLFDLQEISAEIREKTSHLPGVSI 229
           SFNLLQGCRMRNTKTEYVSCPSCGRTLFDLQE+SA+IREKTSHLPGVS+
Sbjct: 626 SFNLLQGCRMRNTKTEYVSCPSCGRTLFDLQEVSAQIREKTSHLPGVSV 674


>Glyma14g14430.1 
          Length = 156

 Score =  109 bits (273), Expect = 3e-24,   Method: Compositional matrix adjust.
 Identities = 61/132 (46%), Positives = 82/132 (62%), Gaps = 20/132 (15%)

Query: 16  VEDSDARLALKRLIDISMGVITPLSEQLTKPLPNAMVLVNLKEIATGAYKLLPEGTRLVV 75
           V   + RL LK  IDISMGVITPL+EQLTKPLPNAMV++              +G   ++
Sbjct: 44  VGYCEQRLPLKS-IDISMGVITPLTEQLTKPLPNAMVVL--------------KGDLHLL 88

Query: 76  SVRGDESYEELEILKDIDATMILHDLPFTEDKIGRVHAARRLFEFLSDHALNFPVIHHIQ 135
             +  + +         +  M  HDLP+TED+I RVHAAR LFE+LSD++LNF +IHHIQ
Sbjct: 89  DFKAGKVHGIF-----FNIIMNFHDLPYTEDRISRVHAARWLFEYLSDNSLNFLIIHHIQ 143

Query: 136 FPNAIHRDDLVI 147
           FPN +   + ++
Sbjct: 144 FPNGMFTSNFLV 155