Jatropha Genome Database

JcCB0219281.10
Show Alignment:  
BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCB0219281.10 + phase: 0 /partial
         (147 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma02g43610.2                                                       289   6e-79
Glyma02g43610.1                                                       289   6e-79
Glyma14g05340.1                                                       286   7e-78
Glyma14g05340.2                                                       277   2e-75
Glyma02g43610.3                                                       228   2e-60

>Glyma02g43610.2 
          Length = 190

 Score =  289 bits (740), Expect = 6e-79,   Method: Compositional matrix adjust.
 Identities = 141/147 (95%), Positives = 145/147 (98%), Gaps = 1/147 (0%)

Query: 1   EVHDYLKTLCPDLHITRGEYDEEMRYPETKTLTIGQFKLGLCHGHQVIPWGDLDSLAMLQ 60
           E+HDYLKTLCPDLHITRGEYDEE +YPETKTLTIGQFKLGLCHGHQVIPWGDLDSLAMLQ
Sbjct: 45  EIHDYLKTLCPDLHITRGEYDEETKYPETKTLTIGQFKLGLCHGHQVIPWGDLDSLAMLQ 104

Query: 61  RQLDVDILVTGHTHQFTAYKHEGGVVINPGSATGAYSSITYDVNPSFVLMDIDGLRVVVY 120
           RQLDVDILVTGHTHQFTAYKHEGGVVINPGSATGAYSSITYDVNPSFVLMDIDGLRVVVY
Sbjct: 105 RQLDVDILVTGHTHQFTAYKHEGGVVINPGSATGAYSSITYDVNPSFVLMDIDGLRVVVY 164

Query: 121 VYELIDGEVKVDKIDFKKTSTTPHAAH 147
           VYELIDGEVKVDKIDFKKTST+ H+AH
Sbjct: 165 VYELIDGEVKVDKIDFKKTSTS-HSAH 190


>Glyma02g43610.1 
          Length = 190

 Score =  289 bits (740), Expect = 6e-79,   Method: Compositional matrix adjust.
 Identities = 141/147 (95%), Positives = 145/147 (98%), Gaps = 1/147 (0%)

Query: 1   EVHDYLKTLCPDLHITRGEYDEEMRYPETKTLTIGQFKLGLCHGHQVIPWGDLDSLAMLQ 60
           E+HDYLKTLCPDLHITRGEYDEE +YPETKTLTIGQFKLGLCHGHQVIPWGDLDSLAMLQ
Sbjct: 45  EIHDYLKTLCPDLHITRGEYDEETKYPETKTLTIGQFKLGLCHGHQVIPWGDLDSLAMLQ 104

Query: 61  RQLDVDILVTGHTHQFTAYKHEGGVVINPGSATGAYSSITYDVNPSFVLMDIDGLRVVVY 120
           RQLDVDILVTGHTHQFTAYKHEGGVVINPGSATGAYSSITYDVNPSFVLMDIDGLRVVVY
Sbjct: 105 RQLDVDILVTGHTHQFTAYKHEGGVVINPGSATGAYSSITYDVNPSFVLMDIDGLRVVVY 164

Query: 121 VYELIDGEVKVDKIDFKKTSTTPHAAH 147
           VYELIDGEVKVDKIDFKKTST+ H+AH
Sbjct: 165 VYELIDGEVKVDKIDFKKTSTS-HSAH 190


>Glyma14g05340.1 
          Length = 190

 Score =  286 bits (731), Expect = 7e-78,   Method: Compositional matrix adjust.
 Identities = 139/147 (94%), Positives = 144/147 (97%), Gaps = 1/147 (0%)

Query: 1   EVHDYLKTLCPDLHITRGEYDEEMRYPETKTLTIGQFKLGLCHGHQVIPWGDLDSLAMLQ 60
           E+ DYLKTLCPDLHITRGEYDEE +YPETKTLTIGQFKLGLCHGHQVIPWGDLDSLAMLQ
Sbjct: 45  EIRDYLKTLCPDLHITRGEYDEETKYPETKTLTIGQFKLGLCHGHQVIPWGDLDSLAMLQ 104

Query: 61  RQLDVDILVTGHTHQFTAYKHEGGVVINPGSATGAYSSITYDVNPSFVLMDIDGLRVVVY 120
           RQLDVDILVTGHTHQFTAYKHEGGVVINPGSATGAYSSITYDVNPSFVLMDIDGLRVVVY
Sbjct: 105 RQLDVDILVTGHTHQFTAYKHEGGVVINPGSATGAYSSITYDVNPSFVLMDIDGLRVVVY 164

Query: 121 VYELIDGEVKVDKIDFKKTSTTPHAAH 147
           VYELIDGEVKVDKIDFKK+ST+ H+AH
Sbjct: 165 VYELIDGEVKVDKIDFKKSSTS-HSAH 190


>Glyma14g05340.2 
          Length = 183

 Score =  277 bits (709), Expect = 2e-75,   Method: Compositional matrix adjust.
 Identities = 135/142 (95%), Positives = 140/142 (98%), Gaps = 1/142 (0%)

Query: 6   LKTLCPDLHITRGEYDEEMRYPETKTLTIGQFKLGLCHGHQVIPWGDLDSLAMLQRQLDV 65
           +KTLCPDLHITRGEYDEE +YPETKTLTIGQFKLGLCHGHQVIPWGDLDSLAMLQRQLDV
Sbjct: 43  IKTLCPDLHITRGEYDEETKYPETKTLTIGQFKLGLCHGHQVIPWGDLDSLAMLQRQLDV 102

Query: 66  DILVTGHTHQFTAYKHEGGVVINPGSATGAYSSITYDVNPSFVLMDIDGLRVVVYVYELI 125
           DILVTGHTHQFTAYKHEGGVVINPGSATGAYSSITYDVNPSFVLMDIDGLRVVVYVYELI
Sbjct: 103 DILVTGHTHQFTAYKHEGGVVINPGSATGAYSSITYDVNPSFVLMDIDGLRVVVYVYELI 162

Query: 126 DGEVKVDKIDFKKTSTTPHAAH 147
           DGEVKVDKIDFKK+ST+ H+AH
Sbjct: 163 DGEVKVDKIDFKKSSTS-HSAH 183


>Glyma02g43610.3 
          Length = 167

 Score =  228 bits (581), Expect = 2e-60,   Method: Compositional matrix adjust.
 Identities = 118/147 (80%), Positives = 122/147 (82%), Gaps = 24/147 (16%)

Query: 1   EVHDYLKTLCPDLHITRGEYDEEMRYPETKTLTIGQFKLGLCHGHQVIPWGDLDSLAMLQ 60
           E+HDYLKTLCPDLHITRGEYDEE +YPETKTLTIGQFKLGLCHGHQVIPWGDLDSLAMLQ
Sbjct: 45  EIHDYLKTLCPDLHITRGEYDEETKYPETKTLTIGQFKLGLCHGHQVIPWGDLDSLAMLQ 104

Query: 61  RQLDVDILVTGHTHQFTAYKHEGGVVINPGSATGAYSSITYDVNPSFVLMDIDGLRVVVY 120
           RQLDVDILV                       TGAYSSITYDVNPSFVLMDIDGLRVVVY
Sbjct: 105 RQLDVDILV-----------------------TGAYSSITYDVNPSFVLMDIDGLRVVVY 141

Query: 121 VYELIDGEVKVDKIDFKKTSTTPHAAH 147
           VYELIDGEVKVDKIDFKKTST+ H+AH
Sbjct: 142 VYELIDGEVKVDKIDFKKTSTS-HSAH 167