Jatropha Genome Database

JcCB0218961.10
Show Alignment:  
BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCB0218961.10 + phase: 2 /partial
         (699 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma05g02710.1                                                       962   0.0  
Glyma17g13410.1                                                       694   0.0  
Glyma18g01700.1                                                        99   2e-20
Glyma07g06810.1                                                        77   6e-14
Glyma16g03370.1                                                        69   2e-11

>Glyma05g02710.1 
          Length = 703

 Score =  962 bits (2487), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 476/676 (70%), Positives = 546/676 (80%), Gaps = 32/676 (4%)

Query: 38  FKSLKCI-PSDSVPNSPTNPNISRFSCSAVTFSPSPPAEFVPDKLLHLITEFQSITEPIN 96
            K  KC+ P  +      NP IS    SA+  S    A  VP KL HL  EF S+ EP+ 
Sbjct: 31  LKPFKCVRPGSASTRFRPNPVIS---SSALRTS----ALVVPSKLEHLAEEFGSLREPVE 83

Query: 97  RVKRVIHYASLLAPFPESSRVDSNRVMGCTARVWLDAQLDRYGKMRFLADSDSEITRGFC 156
           RVKR++HYA+ +AP PES+RVD+NRVMGCTARVW++  +D  GK+R  ADSDSEITRGFC
Sbjct: 84  RVKRLLHYAAAMAPMPESNRVDANRVMGCTARVWVEVGIDEEGKVRVAADSDSEITRGFC 143

Query: 157 ACLLSVLDGAAPEEVLSVKTENLAALNVGLPGGE-RSRVNTWHNVLVSMQKRTRKLVAER 215
           ACL+ VLDG+ P+EV+ V T++L ALNVGLPGG  RSRVNTWHNVLVSMQKRT++L+A+R
Sbjct: 144 ACLVWVLDGSEPDEVMKVTTDDLTALNVGLPGGSGRSRVNTWHNVLVSMQKRTKQLLAQR 203

Query: 216 EGKQLVDPFPSLAVTSEGIQAKGSYAEAQARYLYPDESKVRELVNVLKEKKIGVVAHFYM 275
           EGK   + FPSL ++S+G+  KG+YAEAQA+YL+P+E KV ELVNVLKEKKIGVVAHFYM
Sbjct: 204 EGKVPFESFPSLVISSDGVFPKGTYAEAQAKYLFPNELKVDELVNVLKEKKIGVVAHFYM 263

Query: 276 DPEVQGVLTAAQKLWPHIHISDSLVMADSAVKMAKAGCKFITVLGVDFMSENVRAILDQA 335
           DPEVQG+LTAAQK WPHIHISDSLVMADSAVKMAKAGC+FITVLGVDFMSENVRAILDQA
Sbjct: 264 DPEVQGILTAAQKQWPHIHISDSLVMADSAVKMAKAGCQFITVLGVDFMSENVRAILDQA 323

Query: 336 GFGEVGVYRMSRERIGCSLADAASSPAYMNYLEAASGSPHSLHVVYINTSLETKAYAHEL 395
           GF EVGVYRMS E+IGCSLADAA++  YM YL AAS S  SLHV+YINT LETKAYAHEL
Sbjct: 324 GFSEVGVYRMSNEQIGCSLADAAATRTYMEYLTAASRST-SLHVIYINTKLETKAYAHEL 382

Query: 396 VPTITCTSSNVVQTILQAFAQIPDLNVWYGPDSYMGANIAKLFQQMTVMTDDEIA----- 450
           VPTITCTSSNVVQTILQAFAQ+PDL+++YGPDSYMGANI  LFQQMT MTD+EIA     
Sbjct: 383 VPTITCTSSNVVQTILQAFAQVPDLSIFYGPDSYMGANIKDLFQQMTKMTDEEIAAIHPE 442

Query: 451 ----------------EDGTCIVHHLFGNEVVEKINEMYCDAFLTAHLEVPGEMFSLAME 494
                           +DGTCIVHHLFG+EVVEKI EMYCDAFLTAHLEVPGEMFSLAME
Sbjct: 443 HSQDSIRSLLPRLHYFQDGTCIVHHLFGHEVVEKIKEMYCDAFLTAHLEVPGEMFSLAME 502

Query: 495 AKRRGMGVVGSTQNILDFIKQRVQEALDRNVNDHLQFVLGTESGMITSIVAAVQHLLGSA 554
           AKRRGMGVVGST+NILDFIK RVQEALDRN++DHLQFVLGTESGM+TSIVA V+ LL   
Sbjct: 503 AKRRGMGVVGSTKNILDFIKDRVQEALDRNIDDHLQFVLGTESGMVTSIVATVRSLLEPV 562

Query: 555 GSSA-GAKINVEIVFPVXXXXXXXXXXXXXXXXXXXXAGDFALPVVPGVASGEGCSLHGG 613
            SS+  AK+ VEIVFPV                     GD  LPVVPG+ASGEGCS+HGG
Sbjct: 563 KSSSERAKVTVEIVFPVSSDSISTTTSSLSSGLQTAKVGDIILPVVPGIASGEGCSIHGG 622

Query: 614 CASCPYMKMNSLDSLLKVCEHLPDEKNVIAEYEAERFKLQTPSGKSIADVGCEPILHMRH 673
           CASCPYMKMNSL SLLKV  HLPDE+N+++ Y+AERFKLQTP+G+S+ADVGCEPILHMR+
Sbjct: 623 CASCPYMKMNSLGSLLKVSNHLPDEENILSAYKAERFKLQTPNGRSVADVGCEPILHMRN 682

Query: 674 FQMTKEMPEKLVNEVL 689
           FQ TK++PEKLV+++L
Sbjct: 683 FQATKKLPEKLVDQIL 698


>Glyma17g13410.1 
          Length = 475

 Score =  694 bits (1792), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 343/471 (72%), Positives = 379/471 (80%), Gaps = 40/471 (8%)

Query: 244 QARYLYPDESKVRELVNVLKEKKIGVVAHFYMDPEVQGVLTAAQKLWPHIHISDSLVMAD 303
           QA+YL+P+E KV ELVNVLKEKKIGVVAHFYMDPEVQG+LTAAQK WPHIH+SDSLVMAD
Sbjct: 3   QAKYLFPNELKVDELVNVLKEKKIGVVAHFYMDPEVQGILTAAQKQWPHIHLSDSLVMAD 62

Query: 304 SAVKMAKAGCKFITVLGVDFMSENVRAILDQAGFG-----------------EVGVYRMS 346
           SAVKMAKAGC+FITVLGVDFMSENVRAILDQAGF                   VGVYRMS
Sbjct: 63  SAVKMAKAGCQFITVLGVDFMSENVRAILDQAGFTGQTCCSKIYYYNLVFVLHVGVYRMS 122

Query: 347 RERIGCSLADAASSPAYMNYLEAASGSPHSLHVVYINTSLETKAYAHELVPTITCTSSNV 406
            ++IGCSLADAA++P YM YL AAS S  SLHV+YINT LETKAYAHELVPTITCTSSNV
Sbjct: 123 NKQIGCSLADAAATPTYMEYLAAASRST-SLHVIYINTKLETKAYAHELVPTITCTSSNV 181

Query: 407 VQTILQAFAQIPDLNVWYGPDSYMGANIAKLFQQMTVMTDDEIA---------------- 450
           VQTILQAFAQ+PD +++YGPDSYMGANI  LFQQMT MTD+EIA                
Sbjct: 182 VQTILQAFAQVPDFSIFYGPDSYMGANIKDLFQQMTKMTDEEIAAIHPKHSQDSIRSLLP 241

Query: 451 -----EDGTCIVHHLFGNEVVEKINEMYCDAFLTAHLEVPGEMFSLAMEAKRRGMGVVGS 505
                +DGTCIVHHLFG+EVVEKI EMYCDAFLTAHLEVPGEMFSLAMEAKRRGMGVVGS
Sbjct: 242 RLHYFQDGTCIVHHLFGHEVVEKIKEMYCDAFLTAHLEVPGEMFSLAMEAKRRGMGVVGS 301

Query: 506 TQNILDFIKQRVQEALDRNVNDHLQFVLGTESGMITSIVAAVQHLLGSAGSSAG-AKINV 564
           TQNILDFIK R+QEALDRN++DHLQF+LGTESGM+TSIVA V+ LL  A SS+  AK+ V
Sbjct: 302 TQNILDFIKDRIQEALDRNIDDHLQFILGTESGMVTSIVATVRSLLEPAKSSSQRAKVTV 361

Query: 565 EIVFPVXXXXXXXXXXXXXXXXXXXXAGDFALPVVPGVASGEGCSLHGGCASCPYMKMNS 624
           EIVFPV                     GD  LPVVPG+ASGEGCS+HGGCASCPYMKMNS
Sbjct: 362 EIVFPVSSDSISTTTSSLSSGLNSVKVGDIILPVVPGIASGEGCSIHGGCASCPYMKMNS 421

Query: 625 LDSLLKVCEHLPDEKNVIAEYEAERFKLQTPSGKSIADVGCEPILHMRHFQ 675
           L SLLKV  HLPDE+N+++ Y+AERFKLQTP+GKS+ADVGCEPILHMR+FQ
Sbjct: 422 LSSLLKVSHHLPDEENILSAYKAERFKLQTPNGKSVADVGCEPILHMRNFQ 472


>Glyma18g01700.1 
          Length = 187

 Score = 98.6 bits (244), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 43/77 (55%), Positives = 61/77 (79%)

Query: 80  KLLHLITEFQSITEPINRVKRVIHYASLLAPFPESSRVDSNRVMGCTARVWLDAQLDRYG 139
           KL  L +EF S+T+PI+RVKR++HYASLL  F ++ R+ +NRV GC ++VW+ A++D   
Sbjct: 48  KLTSLTSEFTSLTQPIDRVKRLLHYASLLPHFADNERIPANRVGGCASQVWVVAEVDERR 107

Query: 140 KMRFLADSDSEITRGFC 156
           +MRF ADSDSEI++GFC
Sbjct: 108 RMRFRADSDSEISKGFC 124


>Glyma07g06810.1 
          Length = 367

 Score = 77.0 bits (188), Expect = 6e-14,   Method: Compositional matrix adjust.
 Identities = 47/136 (34%), Positives = 75/136 (55%), Gaps = 3/136 (2%)

Query: 73  PAEFVPDKLLHLITEFQSITEPINRVKRVIHYASLLAPFPESSRVDSNRVMGCTARVWLD 132
           P E +P KL  ++  FQS+ EP  + ++++ Y   L P     + + N+V GC ++VW+ 
Sbjct: 84  PIEDLPPKLQEIVHLFQSVPEPKAKYEQLLFYGKNLKPLEPQFKTNDNKVQGCVSQVWVR 143

Query: 133 AQLDRYGKMRFLADSDSEITRGFCACLLSVLDGAAPEEVLSVKTENLAALNVGLPGG-ER 191
           A LD    + + ADSDS +T+G  A L+  L G    E++ V T + A L +GL      
Sbjct: 144 AYLDPNRNVVYEADSDSGLTKGLAALLVQGLSGRPVNEIIRV-TPDFATL-LGLQQSLTP 201

Query: 192 SRVNTWHNVLVSMQKR 207
           SR N + N+L  MQ++
Sbjct: 202 SRNNGFLNMLKLMQRK 217


>Glyma16g03370.1 
          Length = 246

 Score = 68.6 bits (166), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 48/155 (30%), Positives = 78/155 (50%), Gaps = 3/155 (1%)

Query: 76  FVPDKLLHLITEFQSITEPINRVKRVIHYASLLAPFPESSRVDSNRVMGCTARVWLDAQL 135
           F P K     ++ QS+ EP  + +++I Y   L P     + + N+V GC ++VW+ A L
Sbjct: 16  FNPSKTFLPSSKGQSVPEPKAKYEQLIFYGKNLKPLEPQFKTNDNKVQGCVSQVWVRAYL 75

Query: 136 DRYGKMRFLADSDSEITRGFCACLLSVLDGAAPEEVLSVKTENLAALNVGLPGG-ERSRV 194
           D    + + ADSDS +T+G  A L+  L G    E++ V  + +  L  GL      SR 
Sbjct: 76  DPNRNVVYEADSDSGLTKGLAALLVQGLSGRPVNEIIRVTPDFVTLL--GLQQSLTPSRN 133

Query: 195 NTWHNVLVSMQKRTRKLVAEREGKQLVDPFPSLAV 229
           N + N+L  +Q++   L  E E   +V+   +L V
Sbjct: 134 NGFLNMLKLIQRKALMLYVEAEKGGVVEKVLNLVV 168