Jatropha Genome Database

JcCB0217501.10
Show Alignment:  
BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCB0217501.10 + phase: 1 /pseudo/partial
         (345 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma15g03870.1                                                       436   e-122
Glyma13g41520.1                                                       431   e-121
Glyma02g44000.1                                                       128   7e-30
Glyma02g44000.3                                                       128   9e-30
Glyma14g04950.1                                                       102   6e-22
Glyma09g13510.1                                                        76   6e-14
Glyma02g44000.2                                                        61   2e-09

>Glyma15g03870.1 
          Length = 1356

 Score =  436 bits (1121), Expect = e-122,   Method: Compositional matrix adjust.
 Identities = 201/254 (79%), Positives = 222/254 (87%)

Query: 42   QETNFQGDGSITHYGQQLQYCTLTQLWNELKLSCNLMKAREDTKQYNLHNRWKKRGVALV 101
            +E NFQG+GS+ HYGQ +QY TL  LWNELKLSC+  KARE+  Q+N HNRW+KRG+A++
Sbjct: 959  REINFQGEGSVLHYGQIVQYSTLAPLWNELKLSCDFAKAREEVDQFNSHNRWRKRGIAMI 1018

Query: 102  PTKFGISFTTKFMNQAGALVHVYTDGTVLVTHGGVEMGQGLHTKVAQIAASVFNIPLSSV 161
            P KFGISFTTK MNQAGALV VYTDGTVLVTHGGVEMGQGLHTKVAQIAAS FNIPLSSV
Sbjct: 1019 PNKFGISFTTKLMNQAGALVQVYTDGTVLVTHGGVEMGQGLHTKVAQIAASAFNIPLSSV 1078

Query: 162  FISETSTDKVPNXXXXXXXXXXDMYGAAVLDACEQIKARMEPVASKHNFSSFAELASACY 221
            FIS+TSTDKVPN          DMYGAAVLDACEQI ARMEP+AS+HNF+SFAEL  ACY
Sbjct: 1079 FISDTSTDKVPNASATAASASSDMYGAAVLDACEQIMARMEPIASQHNFNSFAELVGACY 1138

Query: 222  IQRIDLSAHGFYITPEIGFDWSTGKGNPFRYYTYGAAFAEVEIDTLTGDFHTRAADVILD 281
             +RIDLSAHGFYITP+IGFDW+TGKG PFRY+TYGAAFAEVEIDTLTGDFHTR A+V LD
Sbjct: 1139 AERIDLSAHGFYITPDIGFDWTTGKGKPFRYFTYGAAFAEVEIDTLTGDFHTRVANVFLD 1198

Query: 282  LGYSLNPAIDVGQV 295
            LGYSLNPAIDVGQ+
Sbjct: 1199 LGYSLNPAIDVGQI 1212


>Glyma13g41520.1 
          Length = 1380

 Score =  431 bits (1109), Expect = e-121,   Method: Compositional matrix adjust.
 Identities = 202/271 (74%), Positives = 229/271 (84%), Gaps = 2/271 (0%)

Query: 42   QETNFQGDGSITHYGQQLQYCTLTQLWNELKLSCNLMKAREDTKQYNLHNRWKKRGVALV 101
            +E NFQG+GSI HYGQ +QY TL  LWNELKLSC+  KAR++  ++N HNRW+KRG+A++
Sbjct: 990  REINFQGEGSILHYGQIVQYSTLAPLWNELKLSCDFAKARKEVDEFNSHNRWRKRGIAMI 1049

Query: 102  PTKFGISFTTKFMNQAGALVHVYTDGTVLVTHGGVEMGQGLHTKVAQIAASVFNIPLSSV 161
            P KFGISFTTK MNQAGALV VYTDGTVLVTHGGVEMGQGLHTKVAQIAAS F+IPLSSV
Sbjct: 1050 PNKFGISFTTKLMNQAGALVQVYTDGTVLVTHGGVEMGQGLHTKVAQIAASAFHIPLSSV 1109

Query: 162  FISETSTDKVPNXXXXXXXXXXDMYGAAVLDACEQIKARMEPVASKHNFSSFAELASACY 221
            FIS+TSTDKVPN          DMYGAAVLDACEQI  RMEP+ASKHNF+SFAEL  ACY
Sbjct: 1110 FISDTSTDKVPNASPTAASASSDMYGAAVLDACEQIMERMEPIASKHNFNSFAELVGACY 1169

Query: 222  IQRIDLSAHGFYITPEIGFDWSTGKGNPFRYYTYGAAFAEVEIDTLTGDFHTRAADVILD 281
             +RIDLSAHGFYITP+IGFDW+ GKG PFRY+TYGAAFAEVEIDTLTGDFHTR A++ LD
Sbjct: 1170 AERIDLSAHGFYITPDIGFDWTIGKGKPFRYFTYGAAFAEVEIDTLTGDFHTRVANIFLD 1229

Query: 282  LGYSLNPAIDVGQV--PFFLGLPFXAMHDLE 310
            LGYSLNPAIDVGQ+   F  GL + A+ +L+
Sbjct: 1230 LGYSLNPAIDVGQIEGAFIQGLGWVALEELK 1260


>Glyma02g44000.1 
          Length = 1367

 Score =  128 bits (322), Expect = 7e-30,   Method: Compositional matrix adjust.
 Identities = 86/271 (31%), Positives = 132/271 (48%), Gaps = 30/271 (11%)

Query: 56   GQQLQYCTLTQLWNELKLSCNLMKAREDTKQYNLHNRWKKRGVALVPTKFGISFTTKFMN 115
            G+  +Y T+  +W++L +S N     E  K++N  N WKKRG++ VP  + ++     + 
Sbjct: 998  GEPHEY-TMPLIWSKLNVSANYEVRVEMVKEFNRINTWKKRGISRVPVLYEVN-----VK 1051

Query: 116  QAGALVHVYTDGTVLVTHGGVEMGQGLHTKVAQIAA--------SVFNIPLSSVFISETS 167
                 V +++DG+V+V  GG+E+GQGL TKV Q+AA           +  L  V + +T 
Sbjct: 1052 PTTGKVSIFSDGSVVVEVGGIELGQGLWTKVKQMAAFALGAVQCDRIDSLLDKVRVVQTD 1111

Query: 168  TDKVPNXXXXXXXXXXDMYGAAVLDACEQIKARMEPVASK----HNFSSFAELASACYIQ 223
            T  +            +    AV   C+ +  R++P+  K         +  L    Y Q
Sbjct: 1112 TVSLIQGGLTAGSTTSESSCEAVRLCCDILVERLKPLKEKLQEEMGSVKWETLIQQAYAQ 1171

Query: 224  RIDLSAHGFYITPEIGFDWSTGKGNPFRYYTYGAAFAEVEIDTLTGDFHTRAADVILDLG 283
             ++LSA  FY+             N  RY  YGAA +EVEID LTG+      D+I D G
Sbjct: 1172 PVNLSASSFYVP----------GNNSIRYINYGAAVSEVEIDLLTGETRCLQTDIIYDCG 1221

Query: 284  YSLNPAIDVGQV--PFFLGLPFXAMHDLEVH 312
             SLNPA+D+GQ+   F  GL F  + + E +
Sbjct: 1222 QSLNPAVDLGQIEGSFIQGLGFFMLEEYETN 1252


>Glyma02g44000.3 
          Length = 1366

 Score =  128 bits (321), Expect = 9e-30,   Method: Compositional matrix adjust.
 Identities = 86/271 (31%), Positives = 132/271 (48%), Gaps = 30/271 (11%)

Query: 56   GQQLQYCTLTQLWNELKLSCNLMKAREDTKQYNLHNRWKKRGVALVPTKFGISFTTKFMN 115
            G+  +Y T+  +W++L +S N     E  K++N  N WKKRG++ VP  + ++     + 
Sbjct: 998  GEPHEY-TMPLIWSKLNVSANYEVRVEMVKEFNRINTWKKRGISRVPVLYEVN-----VK 1051

Query: 116  QAGALVHVYTDGTVLVTHGGVEMGQGLHTKVAQIAA--------SVFNIPLSSVFISETS 167
                 V +++DG+V+V  GG+E+GQGL TKV Q+AA           +  L  V + +T 
Sbjct: 1052 PTTGKVSIFSDGSVVVEVGGIELGQGLWTKVKQMAAFALGAVQCDRIDSLLDKVRVVQTD 1111

Query: 168  TDKVPNXXXXXXXXXXDMYGAAVLDACEQIKARMEPVASK----HNFSSFAELASACYIQ 223
            T  +            +    AV   C+ +  R++P+  K         +  L    Y Q
Sbjct: 1112 TVSLIQGGLTAGSTTSESSCEAVRLCCDILVERLKPLKEKLQEEMGSVKWETLIQQAYAQ 1171

Query: 224  RIDLSAHGFYITPEIGFDWSTGKGNPFRYYTYGAAFAEVEIDTLTGDFHTRAADVILDLG 283
             ++LSA  FY+             N  RY  YGAA +EVEID LTG+      D+I D G
Sbjct: 1172 PVNLSASSFYVP----------GNNSIRYINYGAAVSEVEIDLLTGETRCLQTDIIYDCG 1221

Query: 284  YSLNPAIDVGQV--PFFLGLPFXAMHDLEVH 312
             SLNPA+D+GQ+   F  GL F  + + E +
Sbjct: 1222 QSLNPAVDLGQIEGAFVQGLGFFMLEEYETN 1252


>Glyma14g04950.1 
          Length = 1370

 Score =  102 bits (254), Expect = 6e-22,   Method: Compositional matrix adjust.
 Identities = 82/273 (30%), Positives = 136/273 (49%), Gaps = 30/273 (10%)

Query: 54   HYGQQLQYCTLTQLWNELKLSCNLMKAREDTKQYNLHNRWKKRGVALVPTKFGISFTTKF 113
            ++G+  +Y TL  +W++L +S N  +  +  +++N  N WKKRG++ VP    ++     
Sbjct: 994  YHGEPYEY-TLPSIWSKLAVSANYDQRTKLVQKFNRINTWKKRGISRVPAVIELT----- 1047

Query: 114  MNQAGALVHVYTDGTVLVTHGGVEMGQGLHTKVAQIAA-SVFNIP-------LSSVFISE 165
            +      V ++ DG+V+V  GG+E+GQGL TKV Q+AA ++ +I        L  V + +
Sbjct: 1048 LRPTPGKVSIFVDGSVVVEVGGIEVGQGLWTKVKQMAAYALGDIQCDGTEGLLDKVRVVQ 1107

Query: 166  TSTDKVPNXXXXXXXXXXDMYGAAVLDACEQIKARMEPVASK----HNFSSFAELASACY 221
            + T  +            +    AV   C  +  R++P+  K     +   +  L    Y
Sbjct: 1108 SDTVSLTQGGFTAGSTTSESSCEAVRLCCNILVERLKPLKEKLQEEMDSIKWETLILQAY 1167

Query: 222  IQRIDLSAHGFYITPEIGFDWSTGKGNPFRYYTYGAAFAEVEIDTLTGDFHTRAADVILD 281
            +Q ++LSA  FY+             +   Y +YGAA +EVEID L G+      D+I D
Sbjct: 1168 MQAVNLSASSFYVP----------SNDSMGYLSYGAAVSEVEIDLLNGETRFLQTDIIYD 1217

Query: 282  LGYSLNPAIDVGQV--PFFLGLPFXAMHDLEVH 312
             G SLNPA+D+GQ+   F  GL F  + + E +
Sbjct: 1218 CGQSLNPAVDLGQIEGAFVQGLGFFMLEEYETN 1250


>Glyma09g13510.1 
          Length = 41

 Score = 75.9 bits (185), Expect = 6e-14,   Method: Compositional matrix adjust.
 Identities = 36/40 (90%), Positives = 38/40 (95%)

Query: 119 ALVHVYTDGTVLVTHGGVEMGQGLHTKVAQIAASVFNIPL 158
           ALV VYTDGT+LVTHGGVEMGQGLHTKVAQIAAS F+IPL
Sbjct: 1   ALVQVYTDGTILVTHGGVEMGQGLHTKVAQIAASAFHIPL 40


>Glyma02g44000.2 
          Length = 198

 Score = 60.8 bits (146), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 36/93 (38%), Positives = 49/93 (52%), Gaps = 12/93 (12%)

Query: 222 IQRIDLSAHGFYITPEIGFDWSTGKGNPFRYYTYGAAFAEVEIDTLTGDFHTRAADVILD 281
           +Q ++L A  FY  P +         N   Y  YGAA +EVEID L G+      D+I D
Sbjct: 1   MQAVNLLASSFY-APSV---------NSMSYLNYGAAVSEVEIDLLNGETRFLQTDIIYD 50

Query: 282 LGYSLNPAIDVGQV--PFFLGLPFXAMHDLEVH 312
            G SLNPA+D+GQ+   F  GL F  + + E +
Sbjct: 51  CGQSLNPAVDLGQIEGAFVQGLGFFMLEEYETN 83