Jatropha Genome Database

JcCB0217351.10
Show Alignment:  
BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCB0217351.10 + phase: 0 /partial
         (158 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma18g51320.1                                                       206   1e-53
Glyma08g28370.1                                                       201   3e-52
Glyma13g07030.1                                                       160   4e-40
Glyma19g05170.1                                                       155   2e-38
Glyma13g01290.1                                                        99   1e-21
Glyma17g07420.1                                                        93   1e-19
Glyma06g06300.1                                                        89   3e-18
Glyma04g06240.1                                                        87   9e-18
Glyma15g32330.1                                                        50   9e-07
Glyma13g40610.1                                                        50   1e-06

>Glyma18g51320.1 
          Length = 352

 Score =  206 bits (523), Expect = 1e-53,   Method: Compositional matrix adjust.
 Identities = 103/147 (70%), Positives = 118/147 (80%), Gaps = 4/147 (2%)

Query: 16  QQYRNFQLGLEFDSSKPTYSYNGSVSISS----MDVGVVQDSTMSEISISHSRTPKGTID 71
           QQ+++FQLGLEFD+SKP +SYNGSVS S     MD+GVV +S M ++SI+H+R PKGTID
Sbjct: 206 QQHQHFQLGLEFDNSKPAFSYNGSVSQSVSVSSMDIGVVPESPMRDVSIAHTRPPKGTID 265

Query: 72  LFSGPPMQMPSQLSPRDREARVLRYXXXXXXXXXXXXIRYASRKAYAETRPRIKGRFAKR 131
           LFSGPP+Q+PS  SP DREARVLRY            IRYASRKAYAETRPRIKGRFAKR
Sbjct: 266 LFSGPPIQVPSHFSPMDREARVLRYREKKKMRKFEKTIRYASRKAYAETRPRIKGRFAKR 325

Query: 132 TDVDFEVDQMFSTTLMTETGYSIVPSF 158
           TDV+ EVDQMFSTTL+TE GY IVPSF
Sbjct: 326 TDVEAEVDQMFSTTLITEVGYGIVPSF 352


>Glyma08g28370.1 
          Length = 348

 Score =  201 bits (511), Expect = 3e-52,   Method: Compositional matrix adjust.
 Identities = 102/151 (67%), Positives = 116/151 (76%), Gaps = 7/151 (4%)

Query: 12  INHHQQYRNFQLGLEFDSSKPTYSYNGSVSISS----MDVGVVQDSTMSEISISHSRTPK 67
           + HHQ   +FQLGLEFD+SK  +SYN SV+ S     MD+GVV +S M ++SI H+RTPK
Sbjct: 201 VQHHQ---HFQLGLEFDNSKAAFSYNASVNQSVSVSSMDIGVVPESPMRDVSIGHTRTPK 257

Query: 68  GTIDLFSGPPMQMPSQLSPRDREARVLRYXXXXXXXXXXXXIRYASRKAYAETRPRIKGR 127
           GTIDLFSGPP+Q+PS  SP DREARVLRY            IRYASRKAYAETRPRIKGR
Sbjct: 258 GTIDLFSGPPIQVPSHFSPMDREARVLRYREKKKTRKFEKTIRYASRKAYAETRPRIKGR 317

Query: 128 FAKRTDVDFEVDQMFSTTLMTETGYSIVPSF 158
           FAKRTDV+ EVDQMFSTTL+TE GY IVPSF
Sbjct: 318 FAKRTDVEAEVDQMFSTTLITEVGYGIVPSF 348


>Glyma13g07030.1 
          Length = 361

 Score =  160 bits (406), Expect = 4e-40,   Method: Compositional matrix adjust.
 Identities = 88/144 (61%), Positives = 105/144 (72%), Gaps = 6/144 (4%)

Query: 19  RNFQLGLEFDSSKPTYSYNGSVSISSMDVGVVQ----DSTMSEISISHSRTPKGTIDLFS 74
           ++FQ GL+FDSSK  +SY+GS+S S     +      +ST+S+IS+SHS++P GT DLF 
Sbjct: 220 QHFQPGLDFDSSKAGFSYDGSLSQSVSVSSMDVGVVLESTISDISMSHSKSPIGTTDLF- 278

Query: 75  GPPMQMPSQLSPRDREARVLRYXXXXXXXXXXXXIRYASRKAYAETRPRIKGRFAKRTDV 134
            PP+ MPS L+P DREARVLRY            IRYASRKAYAETRPRIKGRFAKRTDV
Sbjct: 279 -PPLPMPSHLTPMDREARVLRYREKKKTRKFEKKIRYASRKAYAETRPRIKGRFAKRTDV 337

Query: 135 DFEVDQMFSTTLMTETGYSIVPSF 158
           + EVDQMFSTTL TE G SI P+F
Sbjct: 338 EAEVDQMFSTTLFTEVGGSIFPTF 361


>Glyma19g05170.1 
          Length = 366

 Score =  155 bits (391), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 86/143 (60%), Positives = 101/143 (70%), Gaps = 6/143 (4%)

Query: 20  NFQLGLEFDSSKPTYSYNGSVSISSMDVGVVQ----DSTMSEISISHSRTPKGTIDLFSG 75
           +FQ GL+FDSSK  +SY+GS+S S     +      +ST+S IS+SHS++P GT DLF  
Sbjct: 226 HFQPGLDFDSSKAGFSYDGSLSQSVSVSSMDVGVVPESTVSGISMSHSKSPIGTNDLF-- 283

Query: 76  PPMQMPSQLSPRDREARVLRYXXXXXXXXXXXXIRYASRKAYAETRPRIKGRFAKRTDVD 135
           PP+ MPS L+P DREARVLRY            IRYASRKAYAETRPRIKGRFAKRTDV+
Sbjct: 284 PPLLMPSHLTPMDREARVLRYREKKKTRKFEKKIRYASRKAYAETRPRIKGRFAKRTDVE 343

Query: 136 FEVDQMFSTTLMTETGYSIVPSF 158
            EVDQMFST L  E G SI P+F
Sbjct: 344 AEVDQMFSTKLFNEVGGSIFPTF 366


>Glyma13g01290.1 
          Length = 365

 Score = 99.4 bits (246), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 69/159 (43%), Positives = 92/159 (57%), Gaps = 21/159 (13%)

Query: 12  INHHQQYRNFQLGLEFDSSK--------PTYSYNGSVSISSMDVGVVQD-STMSEISISH 62
           IN+HQ +   +   + D  +        P+ S + SVS SS+DVGVV D +T+S++S S 
Sbjct: 216 INNHQHHHQSETCFDIDFCRSKLSSFNYPSQSLSQSVSSSSLDVGVVPDGNTVSDMSYSS 275

Query: 63  SRTPKGTIDLFSGPPMQMPSQLSPRDREARVLRYXXXXXXXXXXXXIRYASRKAYAETRP 122
                G          Q  +QL   DREARVLRY            IRYASRKAYAETRP
Sbjct: 276 GIVVSGG---------QGATQLCGMDREARVLRYREKRKNRKFEKTIRYASRKAYAETRP 326

Query: 123 RIKGRFAKRTDVDFEVDQMFS---TTLMTETGYSIVPSF 158
           RIKGRFAKRT++D +V++++S     LM +T Y +VP+F
Sbjct: 327 RIKGRFAKRTEIDSDVERLYSPGAAALMLDTPYGVVPTF 365


>Glyma17g07420.1 
          Length = 374

 Score = 92.8 bits (229), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 55/112 (49%), Positives = 72/112 (64%), Gaps = 6/112 (5%)

Query: 53  STMSEISISHSRTPKGT--IDLFSGPPM-QMPSQLSPRDREARVLRYXXXXXXXXXXXXI 109
           +T+S++S S  R    +  I + SG  + Q  +QL   DREARVLRY            I
Sbjct: 263 NTVSDMSYSFGRNSSDSSGIVVVSGNSVGQGATQLCGMDREARVLRYREKRKNRKFEKTI 322

Query: 110 RYASRKAYAETRPRIKGRFAKRTDVDFEVDQMFS---TTLMTETGYSIVPSF 158
           RYASRKAYAETRPRIKGRFAKRT++D +V++++S     LM +T Y +VPSF
Sbjct: 323 RYASRKAYAETRPRIKGRFAKRTEIDSDVERLYSPGPAVLMLDTPYGVVPSF 374


>Glyma06g06300.1 
          Length = 310

 Score = 88.6 bits (218), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 57/115 (49%), Positives = 65/115 (56%), Gaps = 24/115 (20%)

Query: 45  MDVGVVQD-STMSEIS-ISHSRTPKGTIDLFSGPPMQMPSQLSPRDREARVLRYXXXXXX 102
           M+VGVV D +TMSEIS  S+S+            P+ + +Q S  DREARVLRY      
Sbjct: 217 MEVGVVPDGNTMSEISNCSYSKVA----------PVTVTAQFSAADREARVLRYREKRKN 266

Query: 103 XXXXXXIRYASRKAYAETRPRIKGRFAKRTDVDFEVDQMFSTTLMTETGYSIVPS 157
                 IRYASRKAYAETRPRIKGRFAKRTD D               GY +VPS
Sbjct: 267 RKFEKTIRYASRKAYAETRPRIKGRFAKRTDAD------------PLAGYGVVPS 309


>Glyma04g06240.1 
          Length = 309

 Score = 86.7 bits (213), Expect = 9e-18,   Method: Compositional matrix adjust.
 Identities = 65/154 (42%), Positives = 82/154 (53%), Gaps = 22/154 (14%)

Query: 6   AGKDQMINHHQQYRNFQLGLEFDSSKPTYSYNGSVSISSMDVGVVQD-STMSEIS-ISHS 63
           A  D ++     +  F  G +++++      + SVS SSM+VGVV D +TMSE S  S+S
Sbjct: 175 ATADGVVPVQSNFEPFAYGYKYNTTLSQSQMSQSVSSSSMEVGVVPDGNTMSETSNCSYS 234

Query: 64  RTPKGTIDLFSGPPMQMPSQLSPRDREARVLRYXXXXXXXXXXXXIRYASRKAYAETRPR 123
           + P  T+         + +Q S  DREARVLRY            IRYASRKAYAE RPR
Sbjct: 235 KVPPVTV--------TVTAQFSAADREARVLRYREKRKNRKFEKTIRYASRKAYAEARPR 286

Query: 124 IKGRFAKRTDVDFEVDQMFSTTLMTETGYSIVPS 157
           IKGRFAKRTD D               GY +VPS
Sbjct: 287 IKGRFAKRTDPD------------PLAGYGVVPS 308


>Glyma15g32330.1 
          Length = 241

 Score = 50.1 bits (118), Expect = 9e-07,   Method: Compositional matrix adjust.
 Identities = 21/58 (36%), Positives = 33/58 (56%)

Query: 78  MQMPSQLSPRDREARVLRYXXXXXXXXXXXXIRYASRKAYAETRPRIKGRFAKRTDVD 135
           M    + SP +++ R+ RY            I+YA RK  A++RPRI+GRFA+  ++D
Sbjct: 135 MSRACRYSPEEKKVRIERYRSKRNQRNFNKKIKYACRKTLADSRPRIRGRFARNDEID 192


>Glyma13g40610.1 
          Length = 178

 Score = 49.7 bits (117), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 21/58 (36%), Positives = 33/58 (56%)

Query: 78  MQMPSQLSPRDREARVLRYXXXXXXXXXXXXIRYASRKAYAETRPRIKGRFAKRTDVD 135
           M    + SP +++ R+ RY            I+YA RK  A++RPRI+GRFA+  ++D
Sbjct: 72  MSRACRYSPEEKKVRIERYRSKRSQRNFNKKIKYACRKTLADSRPRIRGRFARNDEID 129