Jatropha Genome Database

JcCB0214691.10
Show Alignment:  
BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCB0214691.10 + phase: 0 /partial
         (351 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma09g38460.1                                                       609   e-174
Glyma18g47860.1                                                       599   e-171

>Glyma09g38460.1 
          Length = 677

 Score =  609 bits (1571), Expect = e-174,   Method: Compositional matrix adjust.
 Identities = 294/323 (91%), Positives = 315/323 (97%)

Query: 1   MRGRLIRGGSSKAKTVLLGGLKDHLKTIRRSRRIVFVGCGTSYNAALAARPILEELSGVP 60
           MRGRLI  GS+K+K+VLLGGLKDHLKTIRRSRRI+F+GCGTSYNAALAARPILEELSGVP
Sbjct: 330 MRGRLIHRGSNKSKSVLLGGLKDHLKTIRRSRRILFIGCGTSYNAALAARPILEELSGVP 389

Query: 61  VTMEIASDLVDRQGPIYREDTAVFVSQSGETADTLHALEYALENGALCVGITNTVGSAIA 120
           VTMEIASDL+DR+GPIYREDTAVFVSQSGETADTL AL+YAL+NGALCVGITNTVGSAIA
Sbjct: 390 VTMEIASDLLDREGPIYREDTAVFVSQSGETADTLLALQYALDNGALCVGITNTVGSAIA 449

Query: 121 RHTHCGVHINAGAEIGVASTKAYTSQMVVMAMLALAIGGDAISSQAKRDAIIDGLFDLPN 180
           R+THCGVHINAGAEIGVASTKAYTSQ+VVM MLALAIGGD IS+QA+R+AIIDGLFDLPN
Sbjct: 450 RNTHCGVHINAGAEIGVASTKAYTSQIVVMVMLALAIGGDTISNQARREAIIDGLFDLPN 509

Query: 181 KVREVLKLDQEMKDLAKQLIAEQSLLVFGRGYNYATALEGALKVKEVALMHSEGMLAGEM 240
           KVREVLKLDQEMKDLAKQLIAEQSLLVFGRGYNYATALEGALKVKEVALMHSEGMLAGEM
Sbjct: 510 KVREVLKLDQEMKDLAKQLIAEQSLLVFGRGYNYATALEGALKVKEVALMHSEGMLAGEM 569

Query: 241 KHGPLALVDENLPIIVIATHDACFSKQQSVIQQLHARKGRLIVMCSKGDAASVCPGQSCR 300
           KHGPLALVDENLPI V+AT DACFSKQQSVIQQL+AR+GRLIVMCSKGDAASVCP +SCR
Sbjct: 570 KHGPLALVDENLPIAVVATRDACFSKQQSVIQQLNARRGRLIVMCSKGDAASVCPNESCR 629

Query: 301 VIEVPQVEDCLQPVVNIVPLQVL 323
           VIEVPQVEDCLQPV+N+VPLQ+L
Sbjct: 630 VIEVPQVEDCLQPVINVVPLQLL 652


>Glyma18g47860.1 
          Length = 745

 Score =  599 bits (1544), Expect = e-171,   Method: Compositional matrix adjust.
 Identities = 289/323 (89%), Positives = 314/323 (97%)

Query: 1   MRGRLIRGGSSKAKTVLLGGLKDHLKTIRRSRRIVFVGCGTSYNAALAARPILEELSGVP 60
           MRGRLI  GS+K+K+VLLGGLKDHLKTIRRSRRI+F+GCGTSYNAALAARPILEELSGVP
Sbjct: 398 MRGRLIHRGSNKSKSVLLGGLKDHLKTIRRSRRILFIGCGTSYNAALAARPILEELSGVP 457

Query: 61  VTMEIASDLVDRQGPIYREDTAVFVSQSGETADTLHALEYALENGALCVGITNTVGSAIA 120
           VTMEIASDL+DR+GPIYREDTAVFVSQSGETADTL AL+YAL+NGALCVGITNTVGSAIA
Sbjct: 458 VTMEIASDLLDREGPIYREDTAVFVSQSGETADTLLALQYALDNGALCVGITNTVGSAIA 517

Query: 121 RHTHCGVHINAGAEIGVASTKAYTSQMVVMAMLALAIGGDAISSQAKRDAIIDGLFDLPN 180
           R+THCGVHINAGAEIGVASTKAYTSQ+VVM MLALAIGGD IS+QA+R+AIIDGLFDLP+
Sbjct: 518 RNTHCGVHINAGAEIGVASTKAYTSQIVVMVMLALAIGGDTISNQARREAIIDGLFDLPD 577

Query: 181 KVREVLKLDQEMKDLAKQLIAEQSLLVFGRGYNYATALEGALKVKEVALMHSEGMLAGEM 240
           KVREVLKLD EMKDLAKQLIAEQSLLVFGRGYNYATALEGALKVKEVALMHSEG+LAGEM
Sbjct: 578 KVREVLKLDLEMKDLAKQLIAEQSLLVFGRGYNYATALEGALKVKEVALMHSEGILAGEM 637

Query: 241 KHGPLALVDENLPIIVIATHDACFSKQQSVIQQLHARKGRLIVMCSKGDAASVCPGQSCR 300
           KHGPLALVDENLPI+V+AT DACFSKQQSVIQQL+AR+GRLIVMCSKGDA+SVCP +SCR
Sbjct: 638 KHGPLALVDENLPIVVLATRDACFSKQQSVIQQLNARRGRLIVMCSKGDASSVCPNESCR 697

Query: 301 VIEVPQVEDCLQPVVNIVPLQVL 323
           VIEVP VEDCLQPV+N+VPLQ+L
Sbjct: 698 VIEVPLVEDCLQPVINVVPLQLL 720