Jatropha Genome Database

JcCB0212401.10
Show Alignment:  
BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCB0212401.10 - phase: 0 
         (155 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma08g03190.1                                                       201   2e-52
Glyma05g36390.1                                                       200   6e-52
Glyma09g40640.1                                                       174   5e-44
Glyma18g45210.1                                                       167   5e-42
Glyma02g48000.1                                                        69   2e-12
Glyma13g10820.1                                                        69   3e-12
Glyma14g00590.1                                                        68   3e-12
Glyma14g00590.2                                                        68   3e-12
Glyma09g05640.1                                                        67   5e-12
Glyma15g16950.1                                                        65   2e-11

>Glyma08g03190.1 
          Length = 420

 Score =  201 bits (512), Expect = 2e-52,   Method: Compositional matrix adjust.
 Identities = 99/133 (74%), Positives = 114/133 (85%), Gaps = 4/133 (3%)

Query: 12  KLALVSGLKWVDEVIANSPYAITEQFMNTLFNEHKIDYIIHGDDPCLLPDGTDAYALAKR 71
           +LALVSGLKWVDEVI ++PYAITEQF+N LF+E+KIDY+IHGDDPCLLPDGTDAYA AK+
Sbjct: 120 RLALVSGLKWVDEVITDAPYAITEQFLNRLFHEYKIDYVIHGDDPCLLPDGTDAYAAAKK 179

Query: 72  AGRYKQIKRTEGVSSTDIVGRIL-SVDDPKVCEAHDDKLPLPRDACKANQSSGAYISQFL 130
           AGRYKQIKRTEGVSSTDIVGRIL S+ D K CE H+     P++    NQS  ++I+QFL
Sbjct: 180 AGRYKQIKRTEGVSSTDIVGRILSSLRDQKNCEDHNGTEVKPQE---ENQSKASHIAQFL 236

Query: 131 PTSRRIVQFSNGK 143
           PTSRRIVQFSNGK
Sbjct: 237 PTSRRIVQFSNGK 249


>Glyma05g36390.1 
          Length = 420

 Score =  200 bits (508), Expect = 6e-52,   Method: Compositional matrix adjust.
 Identities = 98/133 (73%), Positives = 114/133 (85%), Gaps = 4/133 (3%)

Query: 12  KLALVSGLKWVDEVIANSPYAITEQFMNTLFNEHKIDYIIHGDDPCLLPDGTDAYALAKR 71
           +LALVSGLKWVDEVI ++PYAITEQF+N LF+E+KIDY+IHGDDPCLLPDGTDAYA AK+
Sbjct: 120 RLALVSGLKWVDEVITDAPYAITEQFLNRLFHEYKIDYVIHGDDPCLLPDGTDAYAAAKK 179

Query: 72  AGRYKQIKRTEGVSSTDIVGRIL-SVDDPKVCEAHDDKLPLPRDACKANQSSGAYISQFL 130
           AGRYKQIKRTEGVSSTDIVGRIL S+ D K C+ H+     P++    NQS  ++I+QFL
Sbjct: 180 AGRYKQIKRTEGVSSTDIVGRILSSLRDQKNCDDHNGTEVKPQE---ENQSQASHIAQFL 236

Query: 131 PTSRRIVQFSNGK 143
           PTSRRIVQFSNGK
Sbjct: 237 PTSRRIVQFSNGK 249


>Glyma09g40640.1 
          Length = 366

 Score =  174 bits (440), Expect = 5e-44,   Method: Compositional matrix adjust.
 Identities = 87/144 (60%), Positives = 105/144 (72%), Gaps = 12/144 (8%)

Query: 12  KLALVSGLKWVDEVIANSPYAITEQFMNTLFNEHKIDYIIHGDDPCLLPDGTDAYALAKR 71
           +L +V+ +KWVDEVI  +PYAITE+FM  LF+E+KID+IIHGDDPC+LPDGTDAYA AK+
Sbjct: 50  RLVMVNAVKWVDEVIPEAPYAITEEFMKKLFDEYKIDFIIHGDDPCVLPDGTDAYAHAKK 109

Query: 72  AGRYKQIKRTEGVSSTDIVGR-ILSVDDPKVCEAHDDKLPLPRD-----------ACKAN 119
           AGRYKQIKRTEGVSSTDIVGR +L V +  + E + +   L R               A 
Sbjct: 110 AGRYKQIKRTEGVSSTDIVGRMLLCVRERSIAEKNHNHSSLQRQFSNGHSPKFEAGVSAA 169

Query: 120 QSSGAYISQFLPTSRRIVQFSNGK 143
            +SG  IS FLPTSRRIVQFSNG+
Sbjct: 170 TASGTRISHFLPTSRRIVQFSNGR 193


>Glyma18g45210.1 
          Length = 420

 Score =  167 bits (422), Expect = 5e-42,   Method: Compositional matrix adjust.
 Identities = 87/144 (60%), Positives = 105/144 (72%), Gaps = 12/144 (8%)

Query: 12  KLALVSGLKWVDEVIANSPYAITEQFMNTLFNEHKIDYIIHGDDPCLLPDGTDAYALAKR 71
           +L +V+ +KWVDEVI  +PYAITE+FM  LF+E+KIDYIIHGDDPC+LPDGTDAYA AK+
Sbjct: 104 RLIMVNAVKWVDEVIPEAPYAITEEFMKKLFDEYKIDYIIHGDDPCVLPDGTDAYAHAKK 163

Query: 72  AGRYKQIKRTEGVSSTDIVGR-ILSVDDPKVCEAHDDKLPLPRDACKANQ---------- 120
           AGRYKQIKRTEGVSSTDIVGR +L V +  + E + +   L R     +           
Sbjct: 164 AGRYKQIKRTEGVSSTDIVGRMLLCVRERSITEKNHNHSSLQRQFSNGHSPKFEAGASAA 223

Query: 121 -SSGAYISQFLPTSRRIVQFSNGK 143
            +SG  IS FLPTSRRIVQFSNG+
Sbjct: 224 TASGTRISHFLPTSRRIVQFSNGR 247


>Glyma02g48000.1 
          Length = 318

 Score = 68.9 bits (167), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 32/77 (41%), Positives = 49/77 (63%), Gaps = 6/77 (7%)

Query: 20  KWVDEVIANSPYAITEQFMNTLFNEHKIDYIIHGDDPCLLPDGT--DAYALAKRAGRYKQ 77
           KWVDEVI ++P+ I ++F++    +H IDY+ H   P     G   D Y   K  GR+K+
Sbjct: 84  KWVDEVIPDAPWVINQEFLD----KHNIDYVAHDSLPYADASGAANDVYEFVKSVGRFKE 139

Query: 78  IKRTEGVSSTDIVGRIL 94
            KRTEG+S++D++ RI+
Sbjct: 140 TKRTEGISTSDVIMRIV 156


>Glyma13g10820.1 
          Length = 292

 Score = 68.6 bits (166), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 31/77 (40%), Positives = 50/77 (64%), Gaps = 6/77 (7%)

Query: 20  KWVDEVIANSPYAITEQFMNTLFNEHKIDYIIHGDDPCLLPDGT--DAYALAKRAGRYKQ 77
           KWVDEVI ++P+ I ++F++    +HKIDY+ H   P     G   D Y   K  G++K+
Sbjct: 72  KWVDEVIPDAPWVINQEFLD----KHKIDYVAHDSLPYADTSGVANDVYEFVKAVGKFKE 127

Query: 78  IKRTEGVSSTDIVGRIL 94
            +RTEG+S++D++ RI+
Sbjct: 128 TQRTEGISTSDVIMRIV 144


>Glyma14g00590.1 
          Length = 318

 Score = 68.2 bits (165), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 32/77 (41%), Positives = 49/77 (63%), Gaps = 6/77 (7%)

Query: 20  KWVDEVIANSPYAITEQFMNTLFNEHKIDYIIHGDDPCLLPDGT--DAYALAKRAGRYKQ 77
           KWVDEVI ++P+ I ++F++    +H IDY+ H   P     G   D Y   K  GR+K+
Sbjct: 84  KWVDEVIPDAPWVINQEFLD----KHYIDYVAHDSLPYADASGAANDVYEFVKSVGRFKE 139

Query: 78  IKRTEGVSSTDIVGRIL 94
            KRTEG+S++D++ RI+
Sbjct: 140 TKRTEGISTSDVIMRIV 156


>Glyma14g00590.2 
          Length = 248

 Score = 68.2 bits (165), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 32/77 (41%), Positives = 49/77 (63%), Gaps = 6/77 (7%)

Query: 20 KWVDEVIANSPYAITEQFMNTLFNEHKIDYIIHGDDPCLLPDGT--DAYALAKRAGRYKQ 77
          KWVDEVI ++P+ I ++F++    +H IDY+ H   P     G   D Y   K  GR+K+
Sbjct: 14 KWVDEVIPDAPWVINQEFLD----KHYIDYVAHDSLPYADASGAANDVYEFVKSVGRFKE 69

Query: 78 IKRTEGVSSTDIVGRIL 94
           KRTEG+S++D++ RI+
Sbjct: 70 TKRTEGISTSDVIMRIV 86


>Glyma09g05640.1 
          Length = 216

 Score = 67.4 bits (163), Expect = 5e-12,   Method: Compositional matrix adjust.
 Identities = 31/78 (39%), Positives = 51/78 (65%), Gaps = 6/78 (7%)

Query: 20 KWVDEVIANSPYAITEQFMNTLFNEHKIDYIIHGDDPCLLPDGT--DAYALAKRAGRYKQ 77
          +WVDEVI ++P+ IT++F++    +H+IDY+ H   P     G   D Y   K  G++K+
Sbjct: 14 RWVDEVIPDAPWVITQEFLD----KHQIDYVAHDSLPYADASGAGKDVYEYVKSVGKFKE 69

Query: 78 IKRTEGVSSTDIVGRILS 95
           KRT+G+S++DI+ RI+ 
Sbjct: 70 TKRTDGISTSDIIMRIIK 87


>Glyma15g16950.1 
          Length = 284

 Score = 65.5 bits (158), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 30/78 (38%), Positives = 50/78 (64%), Gaps = 6/78 (7%)

Query: 20  KWVDEVIANSPYAITEQFMNTLFNEHKIDYIIHGDDPCLLPDGT--DAYALAKRAGRYKQ 77
           +WVDEVI ++P+ I+ +F++    +H+IDY+ H   P     G   D Y   K  G++K+
Sbjct: 82  RWVDEVIPDAPWVISREFLD----KHQIDYVAHDSLPYADASGAGKDVYEYVKSVGKFKE 137

Query: 78  IKRTEGVSSTDIVGRILS 95
            KRT+G+S++DI+ RI+ 
Sbjct: 138 TKRTDGISTSDIIMRIIK 155