Jatropha Genome Database

JcCB0209291.10
Show Alignment:  
BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCB0209291.10 + phase: 0 /partial
         (166 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma03g41050.1                                                       214   3e-56
Glyma19g43700.1                                                       211   3e-55

>Glyma03g41050.1 
          Length = 386

 Score =  214 bits (545), Expect = 3e-56,   Method: Compositional matrix adjust.
 Identities = 120/165 (72%), Positives = 135/165 (81%), Gaps = 3/165 (1%)

Query: 1   MLFQVGGQGTRPTFFEMAAAQQLPASLRAALTYSIGVLALRRPLLHKVLDYEDEFFALLM 60
           MLFQVGGQG+RPTFFEMAAAQQLPASLRAALTYSIGVLALRRP LHK+LD+EDE FALLM
Sbjct: 1   MLFQVGGQGSRPTFFEMAAAQQLPASLRAALTYSIGVLALRRPFLHKLLDFEDESFALLM 60

Query: 61  LVLETHSLRITDASFSESLYGLRRRAVKIKAKNLSS-GEAIELSGLQKHQRVLSVAFLVV 119
           LVLE+H+LR TDASFSESLYGLRRR   I  KN  +       S L++ QRVLSV FLVV
Sbjct: 61  LVLESHTLRTTDASFSESLYGLRRRPANIALKNDDATTTTTSSSALRRRQRVLSVVFLVV 120

Query: 120 LPYFKSKLHSIYNKERDARLQSSLWGDDAIFENFDSHRGEDPLVS 164
           LPY KSKLHSIYN+ER+ARLQ++LWGD+   + FD  RG+   VS
Sbjct: 121 LPYLKSKLHSIYNREREARLQATLWGDET--QGFDDGRGDYSPVS 163


>Glyma19g43700.1 
          Length = 348

 Score =  211 bits (536), Expect = 3e-55,   Method: Compositional matrix adjust.
 Identities = 113/148 (76%), Positives = 126/148 (85%), Gaps = 2/148 (1%)

Query: 1   MLFQVGGQGTRPTFFEMAAAQQLPASLRAALTYSIGVLALRRPLLHKVLDYEDEFFALLM 60
           MLFQVGGQG+RPTFFEMAAAQQLPASLRAALTYSIGVLALRRP LHK+LD+EDE FALLM
Sbjct: 1   MLFQVGGQGSRPTFFEMAAAQQLPASLRAALTYSIGVLALRRPFLHKLLDFEDESFALLM 60

Query: 61  LVLETHSLRITDASFSESLYGLRRRAVKIKAKNLSSGEAIELSGLQKHQRVLSVAFLVVL 120
           LVLE+H+LR TDASFSESLYGLRRR   I  KN         + L++ QRVLSV FLVVL
Sbjct: 61  LVLESHTLRTTDASFSESLYGLRRRPANIALKN--DDATTSNTALRRRQRVLSVLFLVVL 118

Query: 121 PYFKSKLHSIYNKERDARLQSSLWGDDA 148
           PY KSKLHSIYN+ER+ARLQ++LWGD+ 
Sbjct: 119 PYLKSKLHSIYNREREARLQATLWGDET 146