Jatropha Genome Database

JcCB0204821.10
Show Alignment:  
BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCB0204821.10 - phase: 2 /pseudo/partial
         (244 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma02g46350.1                                                       364   e-101
Glyma02g46350.2                                                       363   e-101
Glyma07g39450.1                                                       347   7e-96
Glyma18g10150.1                                                       343   7e-95
Glyma17g01310.1                                                       343   1e-94
Glyma09g01160.1                                                       342   2e-94
Glyma15g11970.1                                                       341   5e-94
Glyma08g38150.1                                                       113   2e-25

>Glyma02g46350.1 
          Length = 549

 Score =  364 bits (935), Expect = e-101,   Method: Compositional matrix adjust.
 Identities = 173/191 (90%), Positives = 183/191 (95%), Gaps = 1/191 (0%)

Query: 51  TSSDFDAKPMVMLLGQYSTGKTTFIKHLLKTSYPGAHIGPEPTTDRFVVVMSGTDERSIP 110
           T+SDFDAKPMVMLLGQYSTGKTTFIKHLLK+SYPGAHIGPEPTTDRFVVVMSG+DERS+P
Sbjct: 194 TNSDFDAKPMVMLLGQYSTGKTTFIKHLLKSSYPGAHIGPEPTTDRFVVVMSGSDERSVP 253

Query: 111 GNTVAVQADMPFNGLTTFGTAFLSKFECSQMPHPLLEHITFVDTPGVLSGEKQRTQRAYD 170
           GNTVAVQADMPF+GLTTFGTAFLSKF CSQMPHPLLEHITFVDTPGVLSGEKQRTQRAYD
Sbjct: 254 GNTVAVQADMPFSGLTTFGTAFLSKFVCSQMPHPLLEHITFVDTPGVLSGEKQRTQRAYD 313

Query: 171 FTGVTSWFAAKCDLILLLFDPHKLDVSDEFKRVISSLRGHDDKIRVVLNKADQVDTQQVR 230
           FTGVTSWFAAKCDLILLLFDPHKLD+SDEF RVISSLRGHDDKIRVVLNKADQVDTQQ+ 
Sbjct: 314 FTGVTSWFAAKCDLILLLFDPHKLDISDEFNRVISSLRGHDDKIRVVLNKADQVDTQQLM 373

Query: 231 ILFNNVLFWTL 241
            ++   L W+L
Sbjct: 374 RVY-GALMWSL 383


>Glyma02g46350.2 
          Length = 543

 Score =  363 bits (933), Expect = e-101,   Method: Compositional matrix adjust.
 Identities = 173/191 (90%), Positives = 183/191 (95%), Gaps = 1/191 (0%)

Query: 51  TSSDFDAKPMVMLLGQYSTGKTTFIKHLLKTSYPGAHIGPEPTTDRFVVVMSGTDERSIP 110
           T+SDFDAKPMVMLLGQYSTGKTTFIKHLLK+SYPGAHIGPEPTTDRFVVVMSG+DERS+P
Sbjct: 188 TNSDFDAKPMVMLLGQYSTGKTTFIKHLLKSSYPGAHIGPEPTTDRFVVVMSGSDERSVP 247

Query: 111 GNTVAVQADMPFNGLTTFGTAFLSKFECSQMPHPLLEHITFVDTPGVLSGEKQRTQRAYD 170
           GNTVAVQADMPF+GLTTFGTAFLSKF CSQMPHPLLEHITFVDTPGVLSGEKQRTQRAYD
Sbjct: 248 GNTVAVQADMPFSGLTTFGTAFLSKFVCSQMPHPLLEHITFVDTPGVLSGEKQRTQRAYD 307

Query: 171 FTGVTSWFAAKCDLILLLFDPHKLDVSDEFKRVISSLRGHDDKIRVVLNKADQVDTQQVR 230
           FTGVTSWFAAKCDLILLLFDPHKLD+SDEF RVISSLRGHDDKIRVVLNKADQVDTQQ+ 
Sbjct: 308 FTGVTSWFAAKCDLILLLFDPHKLDISDEFNRVISSLRGHDDKIRVVLNKADQVDTQQLM 367

Query: 231 ILFNNVLFWTL 241
            ++   L W+L
Sbjct: 368 RVY-GALMWSL 377


>Glyma07g39450.1 
          Length = 545

 Score =  347 bits (890), Expect = 7e-96,   Method: Compositional matrix adjust.
 Identities = 163/191 (85%), Positives = 177/191 (92%), Gaps = 1/191 (0%)

Query: 51  TSSDFDAKPMVMLLGQYSTGKTTFIKHLLKTSYPGAHIGPEPTTDRFVVVMSGTDERSIP 110
           T+SDFDAKPMVMLLGQYSTGKTTFIKHLL+  YPGAHIGPEPTTDRFVVVMSG DERSIP
Sbjct: 190 TNSDFDAKPMVMLLGQYSTGKTTFIKHLLRCDYPGAHIGPEPTTDRFVVVMSGPDERSIP 249

Query: 111 GNTVAVQADMPFNGLTTFGTAFLSKFECSQMPHPLLEHITFVDTPGVLSGEKQRTQRAYD 170
           GNT+AV ADMPF+GLTTFG +FLSKF+CSQMPHPLL+ ITFVDTPGVLSGEKQRTQR+YD
Sbjct: 250 GNTIAVDADMPFSGLTTFGGSFLSKFQCSQMPHPLLDEITFVDTPGVLSGEKQRTQRSYD 309

Query: 171 FTGVTSWFAAKCDLILLLFDPHKLDVSDEFKRVISSLRGHDDKIRVVLNKADQVDTQQVR 230
           FTGV SWFAAKCDLILLLFDPHKLD+SDEFKRVI SLRGHDDKIRVVLNKADQ+DTQQ+ 
Sbjct: 310 FTGVISWFAAKCDLILLLFDPHKLDISDEFKRVIGSLRGHDDKIRVVLNKADQIDTQQLM 369

Query: 231 ILFNNVLFWTL 241
            ++   L W+L
Sbjct: 370 RVY-GALMWSL 379


>Glyma18g10150.1 
          Length = 560

 Score =  343 bits (881), Expect = 7e-95,   Method: Compositional matrix adjust.
 Identities = 170/218 (77%), Positives = 182/218 (83%), Gaps = 28/218 (12%)

Query: 51  TSSDFDAKPMVMLLGQYSTGKTTFIKHLLKTSYPG------------------------- 85
           T+SDFDAKPMV+LLGQYSTGKTTFIKH+LK+SYPG                         
Sbjct: 178 TNSDFDAKPMVLLLGQYSTGKTTFIKHMLKSSYPGNVVTITATTMITSSGDHVGGDDHDV 237

Query: 86  --AHIGPEPTTDRFVVVMSGTDERSIPGNTVAVQADMPFNGLTTFGTAFLSKFECSQMPH 143
             AHIGPEPTTDRFVVVMSG DERSIPGNT+AVQADMPF+GLTTFGT+FLSKFECSQMPH
Sbjct: 238 AGAHIGPEPTTDRFVVVMSGPDERSIPGNTIAVQADMPFSGLTTFGTSFLSKFECSQMPH 297

Query: 144 PLLEHITFVDTPGVLSGEKQRTQRAYDFTGVTSWFAAKCDLILLLFDPHKLDVSDEFKRV 203
           PLLEHITFVD+PGVLSGEKQRT R YDFTGVTSWFAAKCDLILLLFDPHKLDVSDEFKRV
Sbjct: 298 PLLEHITFVDSPGVLSGEKQRTHRQYDFTGVTSWFAAKCDLILLLFDPHKLDVSDEFKRV 357

Query: 204 ISSLRGHDDKIRVVLNKADQVDTQQVRILFNNVLFWTL 241
           ISSLRGHDDKIRVVLNKADQVDTQQ+  ++   L W+L
Sbjct: 358 ISSLRGHDDKIRVVLNKADQVDTQQLMRIY-GALMWSL 394


>Glyma17g01310.1 
          Length = 545

 Score =  343 bits (879), Expect = 1e-94,   Method: Compositional matrix adjust.
 Identities = 161/191 (84%), Positives = 175/191 (91%), Gaps = 1/191 (0%)

Query: 51  TSSDFDAKPMVMLLGQYSTGKTTFIKHLLKTSYPGAHIGPEPTTDRFVVVMSGTDERSIP 110
           T+SDFDAKPMVMLLGQYSTGKTTFIKHLL+  YPGAHIGPEPTTDRFVVVMSG DERSIP
Sbjct: 190 TNSDFDAKPMVMLLGQYSTGKTTFIKHLLRCDYPGAHIGPEPTTDRFVVVMSGPDERSIP 249

Query: 111 GNTVAVQADMPFNGLTTFGTAFLSKFECSQMPHPLLEHITFVDTPGVLSGEKQRTQRAYD 170
           GNT+AV ADMPF+GLTTFG +FLSKF+CSQMPHPLL+ ITFVDTPGVLSGEKQRTQR+YD
Sbjct: 250 GNTIAVDADMPFSGLTTFGGSFLSKFQCSQMPHPLLDEITFVDTPGVLSGEKQRTQRSYD 309

Query: 171 FTGVTSWFAAKCDLILLLFDPHKLDVSDEFKRVISSLRGHDDKIRVVLNKADQVDTQQVR 230
           FTG  SWFAAKCDLILLLFDPHKLD+SDEFKRVI SL GHDDKIRVVLNKADQ+DTQQ+ 
Sbjct: 310 FTGAISWFAAKCDLILLLFDPHKLDISDEFKRVIGSLHGHDDKIRVVLNKADQIDTQQLM 369

Query: 231 ILFNNVLFWTL 241
            ++   L W+L
Sbjct: 370 RVY-GALMWSL 379


>Glyma09g01160.1 
          Length = 518

 Score =  342 bits (877), Expect = 2e-94,   Method: Compositional matrix adjust.
 Identities = 160/194 (82%), Positives = 177/194 (91%), Gaps = 1/194 (0%)

Query: 51  TSSDFDAKPMVMLLGQYSTGKTTFIKHLLKTSYPGAHIGPEPTTDRFVVVMSGTDERSIP 110
           T++DFDAKPMVMLLGQYSTGKTTFIKHLLK  YPGAH+GPEPTTDRFVVVMSG DERSIP
Sbjct: 163 TNTDFDAKPMVMLLGQYSTGKTTFIKHLLKCDYPGAHVGPEPTTDRFVVVMSGPDERSIP 222

Query: 111 GNTVAVQADMPFNGLTTFGTAFLSKFECSQMPHPLLEHITFVDTPGVLSGEKQRTQRAYD 170
           GNT+AV ADMPF GLTTFG +FLSKF+CSQMPHPLL+ +TFVDTPGVLSGEKQRTQR+YD
Sbjct: 223 GNTIAVDADMPFGGLTTFGGSFLSKFQCSQMPHPLLDEVTFVDTPGVLSGEKQRTQRSYD 282

Query: 171 FTGVTSWFAAKCDLILLLFDPHKLDVSDEFKRVISSLRGHDDKIRVVLNKADQVDTQQVR 230
           FTGV SWFAAKCDLILLLFDPHKLD+SDEFKRVI+SL G+DDKIRVVLNKADQVDTQQ+ 
Sbjct: 283 FTGVVSWFAAKCDLILLLFDPHKLDISDEFKRVIASLHGNDDKIRVVLNKADQVDTQQLM 342

Query: 231 ILFNNVLFWTLHCI 244
            ++   L W+L  +
Sbjct: 343 RVY-GALMWSLGKV 355


>Glyma15g11970.1 
          Length = 516

 Score =  341 bits (874), Expect = 5e-94,   Method: Compositional matrix adjust.
 Identities = 159/191 (83%), Positives = 176/191 (92%), Gaps = 1/191 (0%)

Query: 51  TSSDFDAKPMVMLLGQYSTGKTTFIKHLLKTSYPGAHIGPEPTTDRFVVVMSGTDERSIP 110
           T++DFDAKPMVMLLGQYSTGKTTFIKHLLK  YPGAH+GPEPTTDRFVVVMSG DERSIP
Sbjct: 161 TNTDFDAKPMVMLLGQYSTGKTTFIKHLLKCDYPGAHVGPEPTTDRFVVVMSGPDERSIP 220

Query: 111 GNTVAVQADMPFNGLTTFGTAFLSKFECSQMPHPLLEHITFVDTPGVLSGEKQRTQRAYD 170
           GNT+AV ADMPF GLTTFG +FLSKF+CSQMPHPLL+ +TFVDTPGVLSGEKQRTQR+YD
Sbjct: 221 GNTIAVDADMPFGGLTTFGGSFLSKFQCSQMPHPLLDEVTFVDTPGVLSGEKQRTQRSYD 280

Query: 171 FTGVTSWFAAKCDLILLLFDPHKLDVSDEFKRVISSLRGHDDKIRVVLNKADQVDTQQVR 230
           FTGV SWFAAKCDLILLLFDPHKLD+SDEFKRVI+ LRG+DDKIRVVLNKADQV+TQQ+ 
Sbjct: 281 FTGVVSWFAAKCDLILLLFDPHKLDISDEFKRVIACLRGNDDKIRVVLNKADQVNTQQLM 340

Query: 231 ILFNNVLFWTL 241
            ++   L W+L
Sbjct: 341 RVY-GALMWSL 350


>Glyma08g38150.1 
          Length = 488

 Score =  113 bits (282), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 55/95 (57%), Positives = 65/95 (68%), Gaps = 20/95 (21%)

Query: 100 VMSGTDERSIPGNTVAVQADMPFNGLTTFGTAFLSKFECSQMPHPL-------LEHITFV 152
           ++SG D+RSIPGNT+ V A MPF GL TFG +FLSKF+CSQMPHP+       L+ +TFV
Sbjct: 184 IVSGPDQRSIPGNTIVVDAHMPFGGLATFGGSFLSKFQCSQMPHPVTIIFFQSLDEVTFV 243

Query: 153 DTPGVLSGEKQRTQRAYDFTGVTSWFAAKCDLILL 187
           DTPG             DF GV SWFAAKCD+ILL
Sbjct: 244 DTPG-------------DFIGVVSWFAAKCDIILL 265