Jatropha Genome Database

JcCB0203531.10
Show Alignment:  
BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCB0203531.10 + phase: 0 /partial
         (148 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma04g07100.1                                                        98   3e-21
Glyma14g14400.2                                                        87   5e-18
Glyma14g14400.1                                                        87   5e-18
Glyma06g07190.1                                                        87   7e-18
Glyma17g31990.1                                                        80   1e-15

>Glyma04g07100.1 
          Length = 468

 Score = 97.8 bits (242), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 70/169 (41%), Positives = 97/169 (57%), Gaps = 21/169 (12%)

Query: 1   IPPTRPKSPKLGRRKSSSPVDSEGNNGENSRPGRLSLDEKVSTNRSAKGPSPIHSKKPQR 60
           +P TR KSPKLGR+KSS+  + EGN   N+R GRLSLDEKVS     KG SP+H KKPQR
Sbjct: 300 MPTTRAKSPKLGRKKSSTNSEPEGNLSNNARQGRLSLDEKVSQTNPTKGISPVHQKKPQR 359

Query: 61  KSL-PKLPSEKTSLSN---------ATNDEKTPLSKA---LIKENPPTSNQMTEDASAQK 107
           KSL P+L SEKT  SN         A N  K  LS     +   + P   +  E A+A +
Sbjct: 360 KSLPPQLTSEKTRSSNSASVRTSSKAVNGGKNSLSSVTTEVTTLSNPREEEKVEIAAATE 419

Query: 108 QEAI--------IPRALASEEIEAQIDEVVVVREQAEPTLLQEPIASEH 148
           +  +        +P  +  +E E+ ++  +V++E+ +  + QEPIA+EH
Sbjct: 420 ENNVLLNETSKALPLNIEPDETESPVNGDLVIQEKPQLNMAQEPIAAEH 468


>Glyma14g14400.2 
          Length = 481

 Score = 87.4 bits (215), Expect = 5e-18,   Method: Compositional matrix adjust.
 Identities = 77/175 (44%), Positives = 105/175 (60%), Gaps = 29/175 (16%)

Query: 1   IPPTRPKSPKLGRRKSSSPVDSEGNNGENSRPGRLSLDEKVSTNRSAKGPS-PIHSKKPQ 59
           IP TR KSPKLGR+KS++  +S+GNN  +SR  RLSLDEKVS +   KGP+ P+H KKPQ
Sbjct: 307 IPTTRAKSPKLGRKKSTANSESDGNNSSSSRLARLSLDEKVSESNPTKGPTPPVHQKKPQ 366

Query: 60  RKSLP-KLPSEKTSLSN----------ATNDEKTPLSKALIKENPPT-----SNQMTEDA 103
           R+SLP +L SE  S+SN          A  DEK+ LS A  K+N  T     +  MT  A
Sbjct: 367 RRSLPARLASEGNSVSNSRTALTSSKAAIKDEKSSLSSAAKKDNNLTNATGEAKTMTIAA 426

Query: 104 SAQKQ------EAIIPRALA-----SEEIEAQIDEVVVVREQAEPTLLQEPIASE 147
           + +K        A++P  L      SEE E+ ++  + V+E ++ +L QEPIA+E
Sbjct: 427 NEEKSTLSSETSAVMPLNLIPSDKLSEE-ESHVNGDIAVKEYSQLSLEQEPIAAE 480


>Glyma14g14400.1 
          Length = 481

 Score = 87.4 bits (215), Expect = 5e-18,   Method: Compositional matrix adjust.
 Identities = 77/175 (44%), Positives = 105/175 (60%), Gaps = 29/175 (16%)

Query: 1   IPPTRPKSPKLGRRKSSSPVDSEGNNGENSRPGRLSLDEKVSTNRSAKGPS-PIHSKKPQ 59
           IP TR KSPKLGR+KS++  +S+GNN  +SR  RLSLDEKVS +   KGP+ P+H KKPQ
Sbjct: 307 IPTTRAKSPKLGRKKSTANSESDGNNSSSSRLARLSLDEKVSESNPTKGPTPPVHQKKPQ 366

Query: 60  RKSLP-KLPSEKTSLSN----------ATNDEKTPLSKALIKENPPT-----SNQMTEDA 103
           R+SLP +L SE  S+SN          A  DEK+ LS A  K+N  T     +  MT  A
Sbjct: 367 RRSLPARLASEGNSVSNSRTALTSSKAAIKDEKSSLSSAAKKDNNLTNATGEAKTMTIAA 426

Query: 104 SAQKQ------EAIIPRALA-----SEEIEAQIDEVVVVREQAEPTLLQEPIASE 147
           + +K        A++P  L      SEE E+ ++  + V+E ++ +L QEPIA+E
Sbjct: 427 NEEKSTLSSETSAVMPLNLIPSDKLSEE-ESHVNGDIAVKEYSQLSLEQEPIAAE 480


>Glyma06g07190.1 
          Length = 461

 Score = 87.0 bits (214), Expect = 7e-18,   Method: Compositional matrix adjust.
 Identities = 68/159 (42%), Positives = 89/159 (55%), Gaps = 12/159 (7%)

Query: 1   IPPTRPKSPKLGRRKSSSPVDSEGNNGENSRPGRLSLDEKVSTNRSAKGPSPIHSKKPQR 60
           +P TR KSPKLGR+KSS   + EGN   ++R GRLSLDEK+S      G SP+H KKPQR
Sbjct: 304 MPTTRAKSPKLGRKKSSINSEPEGNTSNSARQGRLSLDEKMSQTNPTNGISPVHPKKPQR 363

Query: 61  KSL-PKLPSEKTSLSN---------ATNDEKTPLSKALIKENPPTSNQMTEDASAQKQEA 110
           KSL P+L SEK S SN         A N  KT LS ++  E   ++ +  E         
Sbjct: 364 KSLPPRLASEKISSSNSASVRTSSKAVNGGKTSLS-SVTAEVTLSNARGKEKVQIAAAAT 422

Query: 111 IIPRALASEEIEAQ-IDEVVVVREQAEPTLLQEPIASEH 148
               AL +E  +   ++  +VV E+ +  L QEPIA+EH
Sbjct: 423 EENNALLNETSKVLPVNGDLVVEEKPQLNLAQEPIAAEH 461


>Glyma17g31990.1 
          Length = 481

 Score = 79.7 bits (195), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 70/176 (39%), Positives = 96/176 (54%), Gaps = 29/176 (16%)

Query: 1   IPPTRPKSPKLGRRKSSSPVDSEGNNGENSRPGRLSLDEKVSTNRSAKGPS-PIHSKKPQ 59
           IP TR KSPKLGR+KSS+  +S+GNN  +SR  RLSLDEKVS +   KGP+ P+H KKPQ
Sbjct: 307 IPTTRAKSPKLGRKKSSANSESDGNNSSSSRLARLSLDEKVSESNLTKGPTPPVHQKKPQ 366

Query: 60  RKSLP-KLPSEKTSLSN---------ATNDEKTPLSKA-----------------LIKEN 92
           R+SLP +L  E+ S+SN         A  DEK+ LS A                  I  N
Sbjct: 367 RRSLPARLAPERNSVSNSRTAPTSSKAIKDEKSSLSSAAKKHTNLSNATGEEKAKTIAAN 426

Query: 93  PPTSNQMTEDASAQKQEAIIPRALASEEIEAQIDEVVVVREQAEPTLLQEPIASEH 148
              S   +E + A     ++P    SEE+ + ++  + V E  + +L +EPI + H
Sbjct: 427 EEKSTLSSETSDAVLLNVVLPSDKPSEEV-SHVNGDIAVEENPQLSLAKEPIMAAH 481