Jatropha Genome Database

JcCB0198891.10
Show Alignment:  
BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCB0198891.10 + phase: 0 
         (232 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma16g07150.1                                                       384   e-107
Glyma19g23570.1                                                       382   e-106
Glyma10g26970.1                                                       188   3e-48
Glyma13g04300.1                                                       149   3e-36

>Glyma16g07150.1 
          Length = 279

 Score =  384 bits (986), Expect = e-107,   Method: Compositional matrix adjust.
 Identities = 188/231 (81%), Positives = 204/231 (88%), Gaps = 8/231 (3%)

Query: 1   MATGLIRRGVSIARVSSSAPFTARFVPARFHASEAEAQKVEPKATSSTNLKTFQIYRWNP 60
           MATGL++R     RV SS  F  +    R HASEA+AQ+VEPKA  +  LKTFQIYRWNP
Sbjct: 1   MATGLLKRAAQ--RVPSSPAF--KLAILRAHASEAQAQQVEPKARETPTLKTFQIYRWNP 56

Query: 61  DNPAKPQLQDYQIDLKECGPMVLDALIKIKNEIDPTLTFRRSCREGICGSCAMNIDGCNG 120
           +NP+KP+L+DYQI+LKECGPMVLDALIKIKNEIDP+LTFRRSCREGICGSCAMNIDGCNG
Sbjct: 57  ENPSKPELKDYQINLKECGPMVLDALIKIKNEIDPSLTFRRSCREGICGSCAMNIDGCNG 116

Query: 121 LACLTKIPSGNSS---TITPLPHMYVIKDLVVDMTNFYNQYKSIEPWLKRKNPPQVPGKE 177
           LACLTKIPS  +S   TITPLPHM+VIKDLVVDMTNFYNQYKSIEPWLKRKNPP VPGKE
Sbjct: 117 LACLTKIPSEKNSAATTITPLPHMFVIKDLVVDMTNFYNQYKSIEPWLKRKNPP-VPGKE 175

Query: 178 ILQSKKDRAKLDGMYECILCACCSTSCPSYWWNPESYLGPAALLHANRYFS 228
           ILQSKK+R KLDGMYECILCACCSTSCPSYWWNPESYLGPAALLHANR+ S
Sbjct: 176 ILQSKKEREKLDGMYECILCACCSTSCPSYWWNPESYLGPAALLHANRWIS 226


>Glyma19g23570.1 
          Length = 277

 Score =  382 bits (980), Expect = e-106,   Method: Compositional matrix adjust.
 Identities = 185/229 (80%), Positives = 205/229 (89%), Gaps = 6/229 (2%)

Query: 1   MATGLIRRGVSIARVSSSAPFTARFVPARFHASEAEAQKVEPKATSSTNLKTFQIYRWNP 60
           MATGL++R     R+ SS  F    +  R HASEA+AQ+VEPKA  +  LKTFQIYRW+P
Sbjct: 1   MATGLLKRAAQ--RLPSSPGFKLALL--RAHASEAQAQQVEPKARGTPTLKTFQIYRWSP 56

Query: 61  DNPAKPQLQDYQIDLKECGPMVLDALIKIKNEIDPTLTFRRSCREGICGSCAMNIDGCNG 120
           +NP+KP+L+DYQI+LKECGPMVLDALIKIKNEIDP+LTFRRSCREGICGSCAMNIDGCNG
Sbjct: 57  ENPSKPELKDYQINLKECGPMVLDALIKIKNEIDPSLTFRRSCREGICGSCAMNIDGCNG 116

Query: 121 LACLTKIPS-GNSSTITPLPHMYVIKDLVVDMTNFYNQYKSIEPWLKRKNPPQVPGKEIL 179
           LACLTKIPS G ++TITPLPHM+VIKDLVVDMTNFYNQYKSIEPWLKRKNPP+ PGKEIL
Sbjct: 117 LACLTKIPSEGAATTITPLPHMFVIKDLVVDMTNFYNQYKSIEPWLKRKNPPE-PGKEIL 175

Query: 180 QSKKDRAKLDGMYECILCACCSTSCPSYWWNPESYLGPAALLHANRYFS 228
           QSKK+R KLDGMYECILCACCSTSCPSYWWNPESYLGPAALLHANR+ S
Sbjct: 176 QSKKEREKLDGMYECILCACCSTSCPSYWWNPESYLGPAALLHANRWIS 224


>Glyma10g26970.1 
          Length = 137

 Score =  188 bits (478), Expect = 3e-48,   Method: Compositional matrix adjust.
 Identities = 93/136 (68%), Positives = 108/136 (79%), Gaps = 8/136 (5%)

Query: 33  SEAEAQKVEPKATSSTN-----LKTFQIYRWNPDNPAKPQLQDYQIDLKECGPMVLDALI 87
           SE +AQ+VEPKA  S       LKTFQIYRWNP NP+K +++DYQI+LKE GPMVLDAL 
Sbjct: 2   SEVQAQQVEPKARESPTRKIPTLKTFQIYRWNPKNPSKHKVKDYQINLKEGGPMVLDALN 61

Query: 88  KIKNEIDPTLTFRRSCREGICGSCAMNIDGCNGLACLTKIPSGNSS---TITPLPHMYVI 144
            I+N+IDP+LTFRRSCREGICGSCAMNID  N +ACLTKIP   +S   TITPLPHM+VI
Sbjct: 62  NIQNKIDPSLTFRRSCREGICGSCAMNIDDYNNIACLTKIPLEKNSAAMTITPLPHMFVI 121

Query: 145 KDLVVDMTNFYNQYKS 160
           KDLV+DMTNFY   + 
Sbjct: 122 KDLVMDMTNFYTNLRE 137


>Glyma13g04300.1 
          Length = 96

 Score =  149 bits (375), Expect = 3e-36,   Method: Compositional matrix adjust.
 Identities = 70/95 (73%), Positives = 82/95 (86%), Gaps = 1/95 (1%)

Query: 69  QDYQIDLKECGPMVLDALIKIKNEIDPTLTFRRSCREGICGSCAMNIDGCNGLACLTKIP 128
           +DYQI+LKECGP VLDALI IKNEIDP+LTF+RSCREGI GSCAMNIDGCN L+   K  
Sbjct: 3   KDYQINLKECGPTVLDALINIKNEIDPSLTFQRSCREGIYGSCAMNIDGCNDLSSPKKKI 62

Query: 129 SGNSSTITPLPHMYVIKDLVVDMTNFYNQYKSIEP 163
           S  ++ +TPLPH++V KDLV+DMTNFYNQYKS+EP
Sbjct: 63  SA-TTMVTPLPHVFVFKDLVMDMTNFYNQYKSVEP 96