Jatropha Genome Database
- JcCB0197871.20
BLASTP 2.2.23 [Feb-03-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= JcCB0197871.20 + phase: 0 /TE/partial
(67 letters)
Database: Glyma1.pep
75,778 sequences; 25,431,882 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Glyma01g20680.1 70 6e-13
Glyma04g32860.1 64 3e-11
Glyma19g09060.1 63 7e-11
Glyma18g37160.1 62 1e-10
Glyma0023s00200.1 62 2e-10
Glyma18g33480.1 57 3e-09
>Glyma01g20680.1
Length = 1337
Score = 69.7 bits (169), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 32/68 (47%), Positives = 49/68 (72%), Gaps = 1/68 (1%)
Query: 1 SHVLSAEEIEIQPDLTYE-EPIQILAREIKELRNKKIALVKVLWRNHKTEEATWESEETM 59
SHV+ + ++++ +LTYE +P++I R +K+LR K+I LVKV+W + +E+ATWE E M
Sbjct: 1210 SHVIELDNVQVKENLTYETQPLRIGDRMVKQLRGKEIPLVKVVWGSASSEDATWELEGQM 1269
Query: 60 RQQYPQLF 67
R YP LF
Sbjct: 1270 RDAYPTLF 1277
>Glyma04g32860.1
Length = 1557
Score = 64.3 bits (155), Expect = 3e-11, Method: Composition-based stats.
Identities = 31/68 (45%), Positives = 47/68 (69%), Gaps = 1/68 (1%)
Query: 1 SHVLSAEEIEIQPDLTYE-EPIQILAREIKELRNKKIALVKVLWRNHKTEEATWESEETM 59
SHV+ + ++++ +LTYE +P++I +K+LR K+I LVKV+W + E+ATWE E M
Sbjct: 1388 SHVIELDNVQVKENLTYETQPLRIDDHMVKQLRGKEIPLVKVVWGSASGEDATWELEGQM 1447
Query: 60 RQQYPQLF 67
R YP LF
Sbjct: 1448 RDAYPTLF 1455
>Glyma19g09060.1
Length = 165
Score = 62.8 bits (151), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 31/68 (45%), Positives = 44/68 (64%), Gaps = 1/68 (1%)
Query: 1 SHVLSAEEIEIQPDLTYEE-PIQILAREIKELRNKKIALVKVLWRNHKTEEATWESEETM 59
SHV+ ++++++ +LTYE P++I R K LR K+ LVKV+W E+ATWE E M
Sbjct: 93 SHVVKLDDVQVKENLTYETLPLRIEDRRTKHLRRKENPLVKVIWGGTSGEDATWELESQM 152
Query: 60 RQQYPQLF 67
R YP LF
Sbjct: 153 RVAYPSLF 160
>Glyma18g37160.1
Length = 1398
Score = 62.0 bits (149), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 30/66 (45%), Positives = 49/66 (74%), Gaps = 2/66 (3%)
Query: 1 SHVLSAEEIEIQPDLTYE-EPIQILAREIKELRNKKIALVKVLWRNHKTEEATWESEETM 59
SH+L+ +E++++ +LTY+ +P +I R +K LR K+IALVKV W N + ++TWE E+ M
Sbjct: 1030 SHILAVDEVQVKDNLTYKAQPQKITDRRMKSLRGKEIALVKVQWGNDEG-DSTWELEDRM 1088
Query: 60 RQQYPQ 65
R+ YP+
Sbjct: 1089 RELYPK 1094
>Glyma0023s00200.1
Length = 1657
Score = 61.6 bits (148), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 30/68 (44%), Positives = 47/68 (69%), Gaps = 2/68 (2%)
Query: 1 SHVLSAEEIEIQPDLTYE-EPIQILAREIKELRNKKIALVKVLWRNHKTEEATWESEETM 59
SH+L+ +E++++ +LTY +P +I R K LR K+IALVKV W + ++TW+ E+ M
Sbjct: 1365 SHILAVDEVQVKDNLTYRAQPQKITDRRTKSLRGKEIALVKVQWGTDEG-DSTWDLEDRM 1423
Query: 60 RQQYPQLF 67
R+ YP LF
Sbjct: 1424 RELYPSLF 1431
>Glyma18g33480.1
Length = 1718
Score = 57.4 bits (137), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 29/65 (44%), Positives = 44/65 (67%), Gaps = 2/65 (3%)
Query: 1 SHVLSAEEIEIQPDLTYE-EPIQILAREIKELRNKKIALVKVLWRNHKTEEATWESEETM 59
SH+L+ +E+ ++ +LTY +P +I R K LR K+IALVKV W + ++TWE E+ M
Sbjct: 1363 SHILAVDEVRVKDNLTYRAQPQEITDRRTKSLRGKEIALVKVQWGTDEG-DSTWELEDRM 1421
Query: 60 RQQYP 64
R+ YP
Sbjct: 1422 RELYP 1426