Jatropha Genome Database

JcCB0193291.10
Show Alignment:  
BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCB0193291.10 - phase: 1 /pseudo/partial
         (218 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma16g03660.4                                                       234   5e-62
Glyma16g03660.3                                                       234   5e-62
Glyma16g03660.2                                                       234   5e-62
Glyma16g03660.1                                                       234   5e-62
Glyma07g07260.5                                                       222   3e-58
Glyma07g07260.4                                                       222   3e-58
Glyma07g07260.3                                                       222   3e-58
Glyma07g07260.2                                                       222   3e-58
Glyma07g07260.1                                                       222   3e-58
Glyma02g13200.1                                                       173   1e-43
Glyma07g07230.1                                                        65   6e-11

>Glyma16g03660.4 
          Length = 224

 Score =  234 bits (597), Expect = 5e-62,   Method: Compositional matrix adjust.
 Identities = 111/129 (86%), Positives = 120/129 (93%)

Query: 14  GSAIGALVDPRRADFIAALGETTGKPAFEKVLQRMKRSPEGRAVVLERPHVISAEVRHAW 73
           GSA+GAL+DPRRAD IAALGETTGKPAFE+VLQRMK SPEGRAV+LERP V+SA+V HAW
Sbjct: 20  GSAVGALLDPRRADLIAALGETTGKPAFERVLQRMKSSPEGRAVLLERPRVVSAKVGHAW 79

Query: 74  DLPENTYGAAYARFMGSTNFSPDDRPPVRFMDTDELAYVALRAREPQDFWHTLFDLPTNL 133
           DLP NT+GAAYARFMGS NFSPDDRPPVRFMDTDELAYVA+RARE  DFWHTLFDLPTNL
Sbjct: 80  DLPANTFGAAYARFMGSRNFSPDDRPPVRFMDTDELAYVAMRAREVHDFWHTLFDLPTNL 139

Query: 134 ICESALKVI 142
           I E+ALKVI
Sbjct: 140 IGETALKVI 148


>Glyma16g03660.3 
          Length = 224

 Score =  234 bits (597), Expect = 5e-62,   Method: Compositional matrix adjust.
 Identities = 111/129 (86%), Positives = 120/129 (93%)

Query: 14  GSAIGALVDPRRADFIAALGETTGKPAFEKVLQRMKRSPEGRAVVLERPHVISAEVRHAW 73
           GSA+GAL+DPRRAD IAALGETTGKPAFE+VLQRMK SPEGRAV+LERP V+SA+V HAW
Sbjct: 20  GSAVGALLDPRRADLIAALGETTGKPAFERVLQRMKSSPEGRAVLLERPRVVSAKVGHAW 79

Query: 74  DLPENTYGAAYARFMGSTNFSPDDRPPVRFMDTDELAYVALRAREPQDFWHTLFDLPTNL 133
           DLP NT+GAAYARFMGS NFSPDDRPPVRFMDTDELAYVA+RARE  DFWHTLFDLPTNL
Sbjct: 80  DLPANTFGAAYARFMGSRNFSPDDRPPVRFMDTDELAYVAMRAREVHDFWHTLFDLPTNL 139

Query: 134 ICESALKVI 142
           I E+ALKVI
Sbjct: 140 IGETALKVI 148


>Glyma16g03660.2 
          Length = 224

 Score =  234 bits (597), Expect = 5e-62,   Method: Compositional matrix adjust.
 Identities = 111/129 (86%), Positives = 120/129 (93%)

Query: 14  GSAIGALVDPRRADFIAALGETTGKPAFEKVLQRMKRSPEGRAVVLERPHVISAEVRHAW 73
           GSA+GAL+DPRRAD IAALGETTGKPAFE+VLQRMK SPEGRAV+LERP V+SA+V HAW
Sbjct: 20  GSAVGALLDPRRADLIAALGETTGKPAFERVLQRMKSSPEGRAVLLERPRVVSAKVGHAW 79

Query: 74  DLPENTYGAAYARFMGSTNFSPDDRPPVRFMDTDELAYVALRAREPQDFWHTLFDLPTNL 133
           DLP NT+GAAYARFMGS NFSPDDRPPVRFMDTDELAYVA+RARE  DFWHTLFDLPTNL
Sbjct: 80  DLPANTFGAAYARFMGSRNFSPDDRPPVRFMDTDELAYVAMRAREVHDFWHTLFDLPTNL 139

Query: 134 ICESALKVI 142
           I E+ALKVI
Sbjct: 140 IGETALKVI 148


>Glyma16g03660.1 
          Length = 224

 Score =  234 bits (597), Expect = 5e-62,   Method: Compositional matrix adjust.
 Identities = 111/129 (86%), Positives = 120/129 (93%)

Query: 14  GSAIGALVDPRRADFIAALGETTGKPAFEKVLQRMKRSPEGRAVVLERPHVISAEVRHAW 73
           GSA+GAL+DPRRAD IAALGETTGKPAFE+VLQRMK SPEGRAV+LERP V+SA+V HAW
Sbjct: 20  GSAVGALLDPRRADLIAALGETTGKPAFERVLQRMKSSPEGRAVLLERPRVVSAKVGHAW 79

Query: 74  DLPENTYGAAYARFMGSTNFSPDDRPPVRFMDTDELAYVALRAREPQDFWHTLFDLPTNL 133
           DLP NT+GAAYARFMGS NFSPDDRPPVRFMDTDELAYVA+RARE  DFWHTLFDLPTNL
Sbjct: 80  DLPANTFGAAYARFMGSRNFSPDDRPPVRFMDTDELAYVAMRAREVHDFWHTLFDLPTNL 139

Query: 134 ICESALKVI 142
           I E+ALKVI
Sbjct: 140 IGETALKVI 148


>Glyma07g07260.5 
          Length = 224

 Score =  222 bits (565), Expect = 3e-58,   Method: Compositional matrix adjust.
 Identities = 105/129 (81%), Positives = 116/129 (89%)

Query: 14  GSAIGALVDPRRADFIAALGETTGKPAFEKVLQRMKRSPEGRAVVLERPHVISAEVRHAW 73
           GS +GAL+DPRRAD IAALGETTGK AFE+VLQRMK SPEGRA++LERP V+ A+V HAW
Sbjct: 20  GSTVGALLDPRRADLIAALGETTGKHAFERVLQRMKSSPEGRALLLERPRVVCAKVGHAW 79

Query: 74  DLPENTYGAAYARFMGSTNFSPDDRPPVRFMDTDELAYVALRAREPQDFWHTLFDLPTNL 133
           DL  NT+GAAYARFMGS NFSPDDRPPVRFMDTDELAYVA+RARE  DFWHTLFDLPTNL
Sbjct: 80  DLAANTFGAAYARFMGSRNFSPDDRPPVRFMDTDELAYVAMRAREVHDFWHTLFDLPTNL 139

Query: 134 ICESALKVI 142
           I E+ALK+I
Sbjct: 140 IGETALKLI 148


>Glyma07g07260.4 
          Length = 224

 Score =  222 bits (565), Expect = 3e-58,   Method: Compositional matrix adjust.
 Identities = 105/129 (81%), Positives = 116/129 (89%)

Query: 14  GSAIGALVDPRRADFIAALGETTGKPAFEKVLQRMKRSPEGRAVVLERPHVISAEVRHAW 73
           GS +GAL+DPRRAD IAALGETTGK AFE+VLQRMK SPEGRA++LERP V+ A+V HAW
Sbjct: 20  GSTVGALLDPRRADLIAALGETTGKHAFERVLQRMKSSPEGRALLLERPRVVCAKVGHAW 79

Query: 74  DLPENTYGAAYARFMGSTNFSPDDRPPVRFMDTDELAYVALRAREPQDFWHTLFDLPTNL 133
           DL  NT+GAAYARFMGS NFSPDDRPPVRFMDTDELAYVA+RARE  DFWHTLFDLPTNL
Sbjct: 80  DLAANTFGAAYARFMGSRNFSPDDRPPVRFMDTDELAYVAMRAREVHDFWHTLFDLPTNL 139

Query: 134 ICESALKVI 142
           I E+ALK+I
Sbjct: 140 IGETALKLI 148


>Glyma07g07260.3 
          Length = 224

 Score =  222 bits (565), Expect = 3e-58,   Method: Compositional matrix adjust.
 Identities = 105/129 (81%), Positives = 116/129 (89%)

Query: 14  GSAIGALVDPRRADFIAALGETTGKPAFEKVLQRMKRSPEGRAVVLERPHVISAEVRHAW 73
           GS +GAL+DPRRAD IAALGETTGK AFE+VLQRMK SPEGRA++LERP V+ A+V HAW
Sbjct: 20  GSTVGALLDPRRADLIAALGETTGKHAFERVLQRMKSSPEGRALLLERPRVVCAKVGHAW 79

Query: 74  DLPENTYGAAYARFMGSTNFSPDDRPPVRFMDTDELAYVALRAREPQDFWHTLFDLPTNL 133
           DL  NT+GAAYARFMGS NFSPDDRPPVRFMDTDELAYVA+RARE  DFWHTLFDLPTNL
Sbjct: 80  DLAANTFGAAYARFMGSRNFSPDDRPPVRFMDTDELAYVAMRAREVHDFWHTLFDLPTNL 139

Query: 134 ICESALKVI 142
           I E+ALK+I
Sbjct: 140 IGETALKLI 148


>Glyma07g07260.2 
          Length = 224

 Score =  222 bits (565), Expect = 3e-58,   Method: Compositional matrix adjust.
 Identities = 105/129 (81%), Positives = 116/129 (89%)

Query: 14  GSAIGALVDPRRADFIAALGETTGKPAFEKVLQRMKRSPEGRAVVLERPHVISAEVRHAW 73
           GS +GAL+DPRRAD IAALGETTGK AFE+VLQRMK SPEGRA++LERP V+ A+V HAW
Sbjct: 20  GSTVGALLDPRRADLIAALGETTGKHAFERVLQRMKSSPEGRALLLERPRVVCAKVGHAW 79

Query: 74  DLPENTYGAAYARFMGSTNFSPDDRPPVRFMDTDELAYVALRAREPQDFWHTLFDLPTNL 133
           DL  NT+GAAYARFMGS NFSPDDRPPVRFMDTDELAYVA+RARE  DFWHTLFDLPTNL
Sbjct: 80  DLAANTFGAAYARFMGSRNFSPDDRPPVRFMDTDELAYVAMRAREVHDFWHTLFDLPTNL 139

Query: 134 ICESALKVI 142
           I E+ALK+I
Sbjct: 140 IGETALKLI 148


>Glyma07g07260.1 
          Length = 224

 Score =  222 bits (565), Expect = 3e-58,   Method: Compositional matrix adjust.
 Identities = 105/129 (81%), Positives = 116/129 (89%)

Query: 14  GSAIGALVDPRRADFIAALGETTGKPAFEKVLQRMKRSPEGRAVVLERPHVISAEVRHAW 73
           GS +GAL+DPRRAD IAALGETTGK AFE+VLQRMK SPEGRA++LERP V+ A+V HAW
Sbjct: 20  GSTVGALLDPRRADLIAALGETTGKHAFERVLQRMKSSPEGRALLLERPRVVCAKVGHAW 79

Query: 74  DLPENTYGAAYARFMGSTNFSPDDRPPVRFMDTDELAYVALRAREPQDFWHTLFDLPTNL 133
           DL  NT+GAAYARFMGS NFSPDDRPPVRFMDTDELAYVA+RARE  DFWHTLFDLPTNL
Sbjct: 80  DLAANTFGAAYARFMGSRNFSPDDRPPVRFMDTDELAYVAMRAREVHDFWHTLFDLPTNL 139

Query: 134 ICESALKVI 142
           I E+ALK+I
Sbjct: 140 IGETALKLI 148


>Glyma02g13200.1 
          Length = 183

 Score =  173 bits (438), Expect = 1e-43,   Method: Compositional matrix adjust.
 Identities = 83/108 (76%), Positives = 94/108 (87%), Gaps = 1/108 (0%)

Query: 35  TTGKPAFEKVLQRMKRSPEGRAVVLERPHVISAEVRHAWDLPENTYGAAYARFMGSTNFS 94
           TTGKPAF++V QRMK  PEGRAV+L+RP V+SAEV HAWDLP NT+GAAYARFMGS NFS
Sbjct: 1   TTGKPAFQRVFQRMKNCPEGRAVLLDRPRVVSAEVGHAWDLPANTFGAAYARFMGSRNFS 60

Query: 95  PDDRPPVRFMDTDELAYVALRAREPQDFWHTLFDLPTNLICESALKVI 142
           PDDR  + FMDT+ELAYVA RARE  DFWHTLF+LPTNL+ E+ALKVI
Sbjct: 61  PDDRDHL-FMDTEELAYVATRAREVHDFWHTLFELPTNLVGETALKVI 107


>Glyma07g07230.1 
          Length = 54

 Score = 65.1 bits (157), Expect = 6e-11,   Method: Composition-based stats.
 Identities = 29/35 (82%), Positives = 32/35 (91%)

Query: 14 GSAIGALVDPRRADFIAALGETTGKPAFEKVLQRM 48
          GS +GAL+DPRRAD IAALGETTGK AFE+VLQRM
Sbjct: 20 GSVVGALLDPRRADLIAALGETTGKHAFERVLQRM 54