Jatropha Genome Database

JcCB0192111.10
Show Alignment:  
BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCB0192111.10 + phase: 2 /pseudo/partial
         (263 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma14g04780.2                                                       220   1e-57
Glyma14g04780.1                                                       220   1e-57
Glyma02g44090.2                                                       220   1e-57
Glyma02g44090.1                                                       220   1e-57

>Glyma14g04780.2 
          Length = 309

 Score =  220 bits (560), Expect = 1e-57,   Method: Compositional matrix adjust.
 Identities = 139/260 (53%), Positives = 161/260 (61%), Gaps = 33/260 (12%)

Query: 1   QRPTIPLLXGSKERSVVLNKKKSXGLLXW----EDKITVVFKDLGPXVSY-----CIILV 51
           QR T+P+  GSKER VVLN KKS  L  +     + +TVVFKDLGP VSY     C  L 
Sbjct: 44  QRLTLPVQPGSKERPVVLNYKKS--LKDYTSGNSETLTVVFKDLGPQVSYRTLFFCEYLG 101

Query: 52  FLGVHESFRSXXXXXXXXXXXXXXXQGRTCHQTSXDI----CFLYFKCIMETLFVLXFSH 107
            L ++  F                   R  H          CF Y K I+ET FV  FSH
Sbjct: 102 PLLLYPVF-----YYLPVYQYFGYKGERVIHPVQTYALYYWCFHYAKRILETFFVHRFSH 156

Query: 108 A-PPLCNVFRNCSSYWTFGCYMAYYVNHPLYAPVSDLQXKIGFWLWF--DLSS--CKLLL 162
           A  PL NVFRNC+ YWTFG Y+AYYVNHPLY PV+DLQ KIGF +     +S+  C ++L
Sbjct: 157 ATSPLSNVFRNCAYYWTFGSYIAYYVNHPLYTPVNDLQMKIGFAIGILCQISNFYCHIIL 216

Query: 163 PYLVGKKKKNLCSPDWSGGYQIPRGFLFNMVTCSNYTTEVYQWLGFNIAMQTVAGYFFLV 222
                   KNL SP   GGYQIPRGFLFN+VTC+NYTTE+YQWLGFNIA QTVAGY FLV
Sbjct: 217 --------KNLRSPGGEGGYQIPRGFLFNIVTCANYTTEIYQWLGFNIATQTVAGYIFLV 268

Query: 223 VASMIMTNWAFANHRQLTKV 242
           VA+ IMTNWA A HR+L K+
Sbjct: 269 VATFIMTNWALAKHRRLKKL 288


>Glyma14g04780.1 
          Length = 309

 Score =  220 bits (560), Expect = 1e-57,   Method: Compositional matrix adjust.
 Identities = 139/260 (53%), Positives = 161/260 (61%), Gaps = 33/260 (12%)

Query: 1   QRPTIPLLXGSKERSVVLNKKKSXGLLXW----EDKITVVFKDLGPXVSY-----CIILV 51
           QR T+P+  GSKER VVLN KKS  L  +     + +TVVFKDLGP VSY     C  L 
Sbjct: 44  QRLTLPVQPGSKERPVVLNYKKS--LKDYTSGNSETLTVVFKDLGPQVSYRTLFFCEYLG 101

Query: 52  FLGVHESFRSXXXXXXXXXXXXXXXQGRTCHQTSXDI----CFLYFKCIMETLFVLXFSH 107
            L ++  F                   R  H          CF Y K I+ET FV  FSH
Sbjct: 102 PLLLYPVF-----YYLPVYQYFGYKGERVIHPVQTYALYYWCFHYAKRILETFFVHRFSH 156

Query: 108 A-PPLCNVFRNCSSYWTFGCYMAYYVNHPLYAPVSDLQXKIGFWLWF--DLSS--CKLLL 162
           A  PL NVFRNC+ YWTFG Y+AYYVNHPLY PV+DLQ KIGF +     +S+  C ++L
Sbjct: 157 ATSPLSNVFRNCAYYWTFGSYIAYYVNHPLYTPVNDLQMKIGFAIGILCQISNFYCHIIL 216

Query: 163 PYLVGKKKKNLCSPDWSGGYQIPRGFLFNMVTCSNYTTEVYQWLGFNIAMQTVAGYFFLV 222
                   KNL SP   GGYQIPRGFLFN+VTC+NYTTE+YQWLGFNIA QTVAGY FLV
Sbjct: 217 --------KNLRSPGGEGGYQIPRGFLFNIVTCANYTTEIYQWLGFNIATQTVAGYIFLV 268

Query: 223 VASMIMTNWAFANHRQLTKV 242
           VA+ IMTNWA A HR+L K+
Sbjct: 269 VATFIMTNWALAKHRRLKKL 288


>Glyma02g44090.2 
          Length = 309

 Score =  220 bits (560), Expect = 1e-57,   Method: Compositional matrix adjust.
 Identities = 138/258 (53%), Positives = 159/258 (61%), Gaps = 29/258 (11%)

Query: 1   QRPTIPLLXGSKERSVVLNKKKSXG--LLXWEDKITVVFKDLGPXVSY-----CIILVFL 53
           QR T+P+  GSKER VVLN KKS     +   + +TVVFKDLGP VSY     C  L  L
Sbjct: 44  QRLTLPVQPGSKERPVVLNYKKSLKDYTIGNSETLTVVFKDLGPQVSYRTLFFCEYLGPL 103

Query: 54  GVHESFRSXXXXXXXXXXXXXXXQGRTCHQTSXDI----CFLYFKCIMETLFVLXFSHA- 108
            ++  F                   R  H          CF Y K I+ET FV  FSHA 
Sbjct: 104 LLYPVF-----YYLPVYQYFGYKGERVIHPVQTYALYYWCFHYAKRILETFFVHCFSHAT 158

Query: 109 PPLCNVFRNCSSYWTFGCYMAYYVNHPLYAPVSDLQXKIGFWLWF--DLSS--CKLLLPY 164
            PL NVFRNC+ YWTFG Y+AYYVNHPLY PV+DLQ KIGF       +S+  C ++L  
Sbjct: 159 SPLSNVFRNCAYYWTFGSYIAYYVNHPLYTPVNDLQMKIGFGFGILCQISNFYCHIIL-- 216

Query: 165 LVGKKKKNLCSPDWSGGYQIPRGFLFNMVTCSNYTTEVYQWLGFNIAMQTVAGYFFLVVA 224
                 KNL SP   GGYQIPRGFLFN+VTC+NYTTE+YQWLGFNIA QTVAGY FLVVA
Sbjct: 217 ------KNLRSPGGEGGYQIPRGFLFNIVTCANYTTEIYQWLGFNIATQTVAGYIFLVVA 270

Query: 225 SMIMTNWAFANHRQLTKV 242
           + IMTNWA A HR+L K+
Sbjct: 271 TFIMTNWALAKHRRLKKL 288


>Glyma02g44090.1 
          Length = 309

 Score =  220 bits (560), Expect = 1e-57,   Method: Compositional matrix adjust.
 Identities = 138/258 (53%), Positives = 159/258 (61%), Gaps = 29/258 (11%)

Query: 1   QRPTIPLLXGSKERSVVLNKKKSXG--LLXWEDKITVVFKDLGPXVSY-----CIILVFL 53
           QR T+P+  GSKER VVLN KKS     +   + +TVVFKDLGP VSY     C  L  L
Sbjct: 44  QRLTLPVQPGSKERPVVLNYKKSLKDYTIGNSETLTVVFKDLGPQVSYRTLFFCEYLGPL 103

Query: 54  GVHESFRSXXXXXXXXXXXXXXXQGRTCHQTSXDI----CFLYFKCIMETLFVLXFSHA- 108
            ++  F                   R  H          CF Y K I+ET FV  FSHA 
Sbjct: 104 LLYPVF-----YYLPVYQYFGYKGERVIHPVQTYALYYWCFHYAKRILETFFVHCFSHAT 158

Query: 109 PPLCNVFRNCSSYWTFGCYMAYYVNHPLYAPVSDLQXKIGFWLWF--DLSS--CKLLLPY 164
            PL NVFRNC+ YWTFG Y+AYYVNHPLY PV+DLQ KIGF       +S+  C ++L  
Sbjct: 159 SPLSNVFRNCAYYWTFGSYIAYYVNHPLYTPVNDLQMKIGFGFGILCQISNFYCHIIL-- 216

Query: 165 LVGKKKKNLCSPDWSGGYQIPRGFLFNMVTCSNYTTEVYQWLGFNIAMQTVAGYFFLVVA 224
                 KNL SP   GGYQIPRGFLFN+VTC+NYTTE+YQWLGFNIA QTVAGY FLVVA
Sbjct: 217 ------KNLRSPGGEGGYQIPRGFLFNIVTCANYTTEIYQWLGFNIATQTVAGYIFLVVA 270

Query: 225 SMIMTNWAFANHRQLTKV 242
           + IMTNWA A HR+L K+
Sbjct: 271 TFIMTNWALAKHRRLKKL 288