Jatropha Genome Database

JcCB0191431.10
Show Alignment:  
BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCB0191431.10 + phase: 2 /partial
         (141 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma04g08720.1                                                       187   4e-48
Glyma06g08820.1                                                       182   8e-47
Glyma06g09560.1                                                       164   2e-41
Glyma04g09470.1                                                       164   4e-41
Glyma13g20080.1                                                        82   2e-16
Glyma10g05730.1                                                        82   2e-16
Glyma19g36280.1                                                        79   1e-15
Glyma03g33570.1                                                        76   1e-14

>Glyma04g08720.1 
          Length = 407

 Score =  187 bits (474), Expect = 4e-48,   Method: Compositional matrix adjust.
 Identities = 88/141 (62%), Positives = 106/141 (75%), Gaps = 4/141 (2%)

Query: 1   RFGTWTVAKVMG-QSKGFLDGPVCNGTRVIGWHVNEXXXXXXXXXXXHVDMSGFAFNSTI 59
           RFGTWTVA+++G +S   L GP+CNG++VIGWH +E           H +M GFAFNSTI
Sbjct: 267 RFGTWTVARLLGDKSSIVLQGPICNGSQVIGWHTDESNGKSKRF---HAEMPGFAFNSTI 323

Query: 60  LWDPKRWHRPTIEPIRLLDTVRDGFQVSTIIEQVVEDESQMEGLLQDCSRVMVWHLQLES 119
           LWDPKRWHRPT+EPIR LD+V++   VST+IEQVVEDESQMEGL+ +CSRVMVWH+ LES
Sbjct: 324 LWDPKRWHRPTLEPIRQLDSVKESLWVSTLIEQVVEDESQMEGLMDNCSRVMVWHIDLES 383

Query: 120 SNPFYPPKWFTISNLDVTAQL 140
           S  FYP KW   +NLD    L
Sbjct: 384 SYSFYPQKWIVKNNLDAIVHL 404


>Glyma06g08820.1 
          Length = 433

 Score =  182 bits (463), Expect = 8e-47,   Method: Compositional matrix adjust.
 Identities = 87/141 (61%), Positives = 103/141 (73%), Gaps = 4/141 (2%)

Query: 1   RFGTWTVAKVMG-QSKGFLDGPVCNGTRVIGWHVNEXXXXXXXXXXXHVDMSGFAFNSTI 59
           RFGTWTVA++ G +S   L GP+CNG+RVIGWH NE           H +M GF+FNSTI
Sbjct: 293 RFGTWTVARLSGDKSSIVLQGPICNGSRVIGWHTNESNGKSKRF---HAEMPGFSFNSTI 349

Query: 60  LWDPKRWHRPTIEPIRLLDTVRDGFQVSTIIEQVVEDESQMEGLLQDCSRVMVWHLQLES 119
           LWDPKRWHRPT+EPIR LD+V++   VST+IEQVVEDESQMEGL+ +CSRVMVW + LES
Sbjct: 350 LWDPKRWHRPTLEPIRQLDSVKESLWVSTLIEQVVEDESQMEGLMHNCSRVMVWQIDLES 409

Query: 120 SNPFYPPKWFTISNLDVTAQL 140
           S   YP KW   +NLD    L
Sbjct: 410 SYSSYPQKWIAKNNLDAIVHL 430


>Glyma06g09560.1 
          Length = 414

 Score =  164 bits (416), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 79/137 (57%), Positives = 95/137 (69%), Gaps = 4/137 (2%)

Query: 1   RFGTWTVAKVM-GQSKGFLDGPVCNGTRVIGWHVNEXXXXXXXXXXXHVDMSGFAFNSTI 59
           RFGTW VA ++  ++K  L+GPVCN ++VIGWH NE           HVDMSGFAFNSTI
Sbjct: 276 RFGTWPVAMLVPSKNKAILEGPVCNASQVIGWHTNEKSKRLRRF---HVDMSGFAFNSTI 332

Query: 60  LWDPKRWHRPTIEPIRLLDTVRDGFQVSTIIEQVVEDESQMEGLLQDCSRVMVWHLQLES 119
           LWDPKRW RP+  PIR LDTV++GFQ +T IEQ+VEDESQMEG    CS+++ WHL L +
Sbjct: 333 LWDPKRWQRPSSNPIRQLDTVKEGFQETTFIEQLVEDESQMEGSPPGCSKILNWHLHLTA 392

Query: 120 SNPFYPPKWFTISNLDV 136
            N  YP  W    NLD 
Sbjct: 393 HNIVYPKGWVLQKNLDA 409


>Glyma04g09470.1 
          Length = 300

 Score =  164 bits (414), Expect = 4e-41,   Method: Compositional matrix adjust.
 Identities = 78/137 (56%), Positives = 95/137 (69%), Gaps = 4/137 (2%)

Query: 1   RFGTWTVAKVM-GQSKGFLDGPVCNGTRVIGWHVNEXXXXXXXXXXXHVDMSGFAFNSTI 59
           RFGTW VA +   ++K  L+GPVCN ++VIGWH NE           HVDMSGFAFNSTI
Sbjct: 162 RFGTWPVAMLAPSKNKAILEGPVCNASQVIGWHTNEKSKRLRRF---HVDMSGFAFNSTI 218

Query: 60  LWDPKRWHRPTIEPIRLLDTVRDGFQVSTIIEQVVEDESQMEGLLQDCSRVMVWHLQLES 119
           LWDPKRW RP+  P+R LDTV++GFQ +T IEQ+VEDESQMEG    CS+++ WHL L +
Sbjct: 219 LWDPKRWRRPSSNPVRQLDTVKEGFQETTFIEQLVEDESQMEGSPPGCSKILNWHLHLAA 278

Query: 120 SNPFYPPKWFTISNLDV 136
           +N  YP  W    NLD 
Sbjct: 279 NNIVYPKGWVLQKNLDA 295


>Glyma13g20080.1 
          Length = 344

 Score = 81.6 bits (200), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 45/129 (34%), Positives = 72/129 (55%), Gaps = 12/129 (9%)

Query: 2   FGTWTVAKVMGQSKG-FLDGPVCNGTRVIGWHVNEXXXXXXXXXXXHVDMSGFAFNSTIL 60
           FGTW  A +    K   ++GPVC+ ++VIGWH+              + +S FAFNS+IL
Sbjct: 214 FGTWPTASLAANRKKVMIEGPVCDSSKVIGWHLRNMNNETDIITPP-IHISSFAFNSSIL 272

Query: 61  WDPKRWHRPTIEPIRLLDTVRDGFQVSTIIEQVVEDESQMEGL-LQDCSRVMVWHLQLES 119
           WDP+RW R +     L DT ++  +   + E V+ED+ ++ G+  +DCSR+++W     +
Sbjct: 273 WDPERWGRTS----SLQDTSQNSIKF--VKEVVLEDQEKLRGIPPEDCSRILLWRFNFHA 326

Query: 120 ---SNPFYP 125
              SN  +P
Sbjct: 327 RTTSNHKFP 335


>Glyma10g05730.1 
          Length = 347

 Score = 81.6 bits (200), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 43/120 (35%), Positives = 70/120 (58%), Gaps = 9/120 (7%)

Query: 2   FGTWTVAKVMGQSKG-FLDGPVCNGTRVIGWHVNEXXXXXXXXXXXHVDMSGFAFNSTIL 60
           FGTW  A +    K   ++GPVC+ ++VIGWH+              + +S FAFNS+IL
Sbjct: 217 FGTWPTALLAANMKKVIIEGPVCDSSQVIGWHLRNMNNETDTITPP-IHISSFAFNSSIL 275

Query: 61  WDPKRWHRPTIEPIRLLDTVRDGFQVSTIIEQVVEDESQMEGL-LQDCSRVMVWHLQLES 119
           WDP+RW R +     L DT ++  +   + E V+EDE++++G+  +DCSR+++W     +
Sbjct: 276 WDPERWGRTS----SLQDTSQNSIKF--VKEVVLEDEAKLKGIPPEDCSRILLWRFNFHA 329


>Glyma19g36280.1 
          Length = 344

 Score = 79.3 bits (194), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 44/122 (36%), Positives = 71/122 (58%), Gaps = 13/122 (10%)

Query: 2   FGTWTVAKVMGQSKGF-LDGPVCNGTRVIGWHVNEXXXXXXXXXXXHVDMSGFAFNSTIL 60
           FGTW  A +    K   ++GPVC+ ++VIGWH+              + +S FAFNS+IL
Sbjct: 226 FGTWPTALLAAHRKKVKIEGPVCDSSQVIGWHLRNMNNETDTITPP-IHISSFAFNSSIL 284

Query: 61  WDPKRWHRPTIEPIRLLDTVRDGFQVS-TIIEQVV-EDESQMEGL-LQDCSRVMVWHLQL 117
           WDP+RW R +        +V+D  Q S   ++QVV EDE++++G+  +DCS++++W    
Sbjct: 285 WDPERWGRTS--------SVQDTSQNSIKFVKQVVLEDEAKLKGIPPEDCSKILLWRFNF 336

Query: 118 ES 119
            +
Sbjct: 337 RA 338


>Glyma03g33570.1 
          Length = 342

 Score = 75.9 bits (185), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 43/122 (35%), Positives = 70/122 (57%), Gaps = 13/122 (10%)

Query: 2   FGTWTVAKVMGQSKGF-LDGPVCNGTRVIGWHVNEXXXXXXXXXXXHVDMSGFAFNSTIL 60
           FGTW  A +    K   ++GPVC+ ++VIGWH+              + +S FAFNS+IL
Sbjct: 227 FGTWPTALLAAHRKKVKIEGPVCDSSQVIGWHLKNMNNETDTITPP-IHISSFAFNSSIL 285

Query: 61  WDPKRWHRPTIEPIRLLDTVRDGFQVS-TIIEQVV-EDESQMEGL-LQDCSRVMVWHLQL 117
           WD +RW R +        +V+D  Q S   ++QVV EDE++++G+  +DCS++++W    
Sbjct: 286 WDSERWGRTS--------SVQDTSQNSIKFVKQVVLEDEAKLKGIPPEDCSKILLWRFNF 337

Query: 118 ES 119
            +
Sbjct: 338 RA 339