Jatropha Genome Database

JcCB0190821.10
Show Alignment:  
BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCB0190821.10 - phase: 0 /pseudo
         (236 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma04g03490.1                                                       339   1e-93
Glyma04g03490.2                                                       339   1e-93
Glyma19g02030.1                                                       333   9e-92
Glyma06g03560.1                                                       253   1e-67
Glyma14g17230.1                                                        99   5e-21
Glyma04g09800.1                                                        59   6e-09
Glyma04g09800.2                                                        58   7e-09
Glyma06g09880.1                                                        56   4e-08

>Glyma04g03490.1 
          Length = 568

 Score =  339 bits (870), Expect = 1e-93,   Method: Compositional matrix adjust.
 Identities = 161/207 (77%), Positives = 186/207 (89%)

Query: 1   MASAALICDTHPWKTLKAHVEDIKKTHLRDLMSDSERCKSMVVEFDGIIVDFSRQQATVD 60
           MAS+ALI DT  WK LKAHVEDI KTHLRDL+SD +RC+SM+VEFD I++D+SRQQAT +
Sbjct: 1   MASSALISDTQQWKDLKAHVEDINKTHLRDLLSDDKRCQSMLVEFDDILLDYSRQQATPE 60

Query: 61  TVDKLYNLAEAAHLKEKIHHMFNGERINTTENRSVLHVALRAPRDAVIKSDGKNVVPDVW 120
           T+ KL+ LAEAA LKEKI  M++GE IN+TENRSVLHVALRA RDAVI+SDG+NVVP+VW
Sbjct: 61  TIQKLFELAEAASLKEKIIRMYSGEHINSTENRSVLHVALRASRDAVIQSDGQNVVPEVW 120

Query: 121 NVLDKIKDFSERLRNGSWVGATGKQLTDVIAIGIGGSFLGPLFVHTALQTDPEASKFAKG 180
            VLDKI++FSE++RNGSWVGATGK L DV+AIGIGGSFLGPLFVHTALQTDPEA + A+G
Sbjct: 121 KVLDKIQEFSEQIRNGSWVGATGKALKDVVAIGIGGSFLGPLFVHTALQTDPEAVESARG 180

Query: 181 RQLRFLANVDPIDVARNIAGLHPETTL 207
           RQLRFLANVDPIDVARNI GL+PETTL
Sbjct: 181 RQLRFLANVDPIDVARNITGLNPETTL 207


>Glyma04g03490.2 
          Length = 487

 Score =  339 bits (870), Expect = 1e-93,   Method: Compositional matrix adjust.
 Identities = 161/207 (77%), Positives = 186/207 (89%)

Query: 1   MASAALICDTHPWKTLKAHVEDIKKTHLRDLMSDSERCKSMVVEFDGIIVDFSRQQATVD 60
           MAS+ALI DT  WK LKAHVEDI KTHLRDL+SD +RC+SM+VEFD I++D+SRQQAT +
Sbjct: 1   MASSALISDTQQWKDLKAHVEDINKTHLRDLLSDDKRCQSMLVEFDDILLDYSRQQATPE 60

Query: 61  TVDKLYNLAEAAHLKEKIHHMFNGERINTTENRSVLHVALRAPRDAVIKSDGKNVVPDVW 120
           T+ KL+ LAEAA LKEKI  M++GE IN+TENRSVLHVALRA RDAVI+SDG+NVVP+VW
Sbjct: 61  TIQKLFELAEAASLKEKIIRMYSGEHINSTENRSVLHVALRASRDAVIQSDGQNVVPEVW 120

Query: 121 NVLDKIKDFSERLRNGSWVGATGKQLTDVIAIGIGGSFLGPLFVHTALQTDPEASKFAKG 180
            VLDKI++FSE++RNGSWVGATGK L DV+AIGIGGSFLGPLFVHTALQTDPEA + A+G
Sbjct: 121 KVLDKIQEFSEQIRNGSWVGATGKALKDVVAIGIGGSFLGPLFVHTALQTDPEAVESARG 180

Query: 181 RQLRFLANVDPIDVARNIAGLHPETTL 207
           RQLRFLANVDPIDVARNI GL+PETTL
Sbjct: 181 RQLRFLANVDPIDVARNITGLNPETTL 207


>Glyma19g02030.1 
          Length = 911

 Score =  333 bits (854), Expect = 9e-92,   Method: Compositional matrix adjust.
 Identities = 162/233 (69%), Positives = 189/233 (81%), Gaps = 26/233 (11%)

Query: 1   MASAALICDTHPWKTLK--------------------------AHVEDIKKTHLRDLMSD 34
           MAS+ LICDT  WK LK                          AH ED++KTHLRDL+SD
Sbjct: 1   MASSTLICDTQQWKELKVTNNYFLYIYNAEIVKHSINCISFVQAHAEDVEKTHLRDLLSD 60

Query: 35  SERCKSMVVEFDGIIVDFSRQQATVDTVDKLYNLAEAAHLKEKIHHMFNGERINTTENRS 94
            ER +SMVVEFDGI++D+SRQQAT++T +KL+ LAE A LK+KI+ M+NGE IN+TENRS
Sbjct: 61  DERSQSMVVEFDGILLDYSRQQATLETREKLFKLAEVASLKQKINQMYNGEYINSTENRS 120

Query: 95  VLHVALRAPRDAVIKSDGKNVVPDVWNVLDKIKDFSERLRNGSWVGATGKQLTDVIAIGI 154
           VLHVALRAPRDAVI+SDG NVVPDVWNVLDKI++FSER+R+GSWVGATGK+L DV+A+GI
Sbjct: 121 VLHVALRAPRDAVIQSDGNNVVPDVWNVLDKIQEFSERVRSGSWVGATGKELKDVVAVGI 180

Query: 155 GGSFLGPLFVHTALQTDPEASKFAKGRQLRFLANVDPIDVARNIAGLHPETTL 207
           GGSFLGPLFVHTALQTDPEA + A+GRQLRFLANVDPIDVARNI GL+PETTL
Sbjct: 181 GGSFLGPLFVHTALQTDPEAIESARGRQLRFLANVDPIDVARNITGLNPETTL 233


>Glyma06g03560.1 
          Length = 492

 Score =  253 bits (646), Expect = 1e-67,   Method: Compositional matrix adjust.
 Identities = 121/170 (71%), Positives = 145/170 (85%), Gaps = 6/170 (3%)

Query: 1   MASAALICDTHPWKTLKAHVEDIKKTHLRDLMSDSERCKSMVVEFDGIIVDFSRQQATVD 60
           MAS+ALI DT PWK LKAHV+D+KK HLRDL+SD +RC+SM+VEFD I++D++RQQAT +
Sbjct: 1   MASSALISDTQPWKDLKAHVDDVKKAHLRDLLSDDKRCQSMLVEFDDILLDYARQQATPE 60

Query: 61  TVDKLYNLAEAAHLKEKIHHMFNGERINTTENRSVLHVALRAPRDAVIKSDGKNVVPDVW 120
           T+ KL+ LAEAA LKEKI+ M++GE IN+TENRSVLHVAL A RD VI+SDGKNVVP+VW
Sbjct: 61  TIQKLFELAEAASLKEKINRMYSGEHINSTENRSVLHVALHASRDVVIESDGKNVVPEVW 120

Query: 121 NVLDKIKDFSERLRNGSWVGATGKQLTDVIAIGIGGSFLGPLFVHTALQT 170
            VLDKI+DFSER      VGATGK L D +A+GIGG+FLGPLFVHTALQT
Sbjct: 121 KVLDKIQDFSER------VGATGKALKDAVAVGIGGNFLGPLFVHTALQT 164


>Glyma14g17230.1 
          Length = 177

 Score = 98.6 bits (244), Expect = 5e-21,   Method: Compositional matrix adjust.
 Identities = 48/69 (69%), Positives = 57/69 (82%), Gaps = 3/69 (4%)

Query: 139 VGATGKQLTDVIAIGIGGSFLGPLFVHTALQTDPEASKFAKGRQLRFLANVDPIDVARNI 198
           VGATGK L +V+AIGIGGSFLGPLFVHTALQ DPEA +F +G    +LANVD ID+ARN+
Sbjct: 55  VGATGKALKNVVAIGIGGSFLGPLFVHTALQIDPEAIEFTRG---HYLANVDLIDMARNM 111

Query: 199 AGLHPETTL 207
             L+P+TTL
Sbjct: 112 TMLNPKTTL 120


>Glyma04g09800.1 
          Length = 648

 Score = 58.5 bits (140), Expect = 6e-09,   Method: Compositional matrix adjust.
 Identities = 47/160 (29%), Positives = 74/160 (46%), Gaps = 14/160 (8%)

Query: 47  GIIVDFSRQQATVDTVDKLYNLAEAAHLKEKIHHMFNGERINTTENRSVLHVALRAPRDA 106
           GI +D SR   + + V ++    +AA     +  +  G   N  E+R V H  LR P+  
Sbjct: 91  GIYLDVSRVGFSDEFVKEMEPRFQAAF--RAMEELEKGAIANPDESRMVGHYWLRDPK-- 146

Query: 107 VIKSDGKNVVPDVWNVLDKIKDFSERLRNGSWVGATGKQ--LTDVIAIGIGGSFLGPLFV 164
             ++    +   + N LD +  F+  + +G     +  +   T ++++GIGGS LGP FV
Sbjct: 147 --RAPNSFLKTQIENTLDAVCKFANDVVSGKIKPPSSPEGRFTQILSVGIGGSALGPQFV 204

Query: 165 HTALQTDPEASKFAKGRQLRFLANVDPIDVARNIAGLHPE 204
             AL  D    K      +RF+ N DP  +   IA L PE
Sbjct: 205 AEALAPDNPPLK------IRFVDNTDPAGIDHQIAQLGPE 238


>Glyma04g09800.2 
          Length = 615

 Score = 58.2 bits (139), Expect = 7e-09,   Method: Compositional matrix adjust.
 Identities = 47/160 (29%), Positives = 74/160 (46%), Gaps = 14/160 (8%)

Query: 47  GIIVDFSRQQATVDTVDKLYNLAEAAHLKEKIHHMFNGERINTTENRSVLHVALRAPRDA 106
           GI +D SR   + + V ++    +AA     +  +  G   N  E+R V H  LR P+  
Sbjct: 91  GIYLDVSRVGFSDEFVKEMEPRFQAAF--RAMEELEKGAIANPDESRMVGHYWLRDPK-- 146

Query: 107 VIKSDGKNVVPDVWNVLDKIKDFSERLRNGSWVGATGKQ--LTDVIAIGIGGSFLGPLFV 164
             ++    +   + N LD +  F+  + +G     +  +   T ++++GIGGS LGP FV
Sbjct: 147 --RAPNSFLKTQIENTLDAVCKFANDVVSGKIKPPSSPEGRFTQILSVGIGGSALGPQFV 204

Query: 165 HTALQTDPEASKFAKGRQLRFLANVDPIDVARNIAGLHPE 204
             AL  D    K      +RF+ N DP  +   IA L PE
Sbjct: 205 AEALAPDNPPLK------IRFVDNTDPAGIDHQIAQLGPE 238


>Glyma06g09880.1 
          Length = 615

 Score = 55.8 bits (133), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 49/163 (30%), Positives = 73/163 (44%), Gaps = 20/163 (12%)

Query: 47  GIIVDFSRQQATVDTVDKLYNLAEAAHLKEKIHHMFNGERINTTENRSVLHVALRAPR-- 104
           GI +D SR   + + V ++    EAA     +  +  G   N  E R V H  LR P+  
Sbjct: 91  GIYLDVSRVGFSDEFVKEMEPCFEAAF--RAMEELEKGAIANPDEGRMVGHYWLRDPKRA 148

Query: 105 -DAVIKSDGKNVVPDVWNVLDKIKDFSERLRNGSWVGATGKQ--LTDVIAIGIGGSFLGP 161
             A +K+        + N LD +  F+  + +G     +  +   T ++++GIGGS LGP
Sbjct: 149 PTAFLKTQ-------IENTLDAVCKFANDVVSGKIKPPSSPEGRFTQILSVGIGGSALGP 201

Query: 162 LFVHTALQTDPEASKFAKGRQLRFLANVDPIDVARNIAGLHPE 204
            FV  AL  D    K      +RF+ N DP  +   IA L  E
Sbjct: 202 QFVAEALAPDNPPLK------IRFVDNTDPAGIDHQIAQLGSE 238