Jatropha Genome Database

JcCB0190191.10
Show Alignment:  
BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCB0190191.10 + phase: 2 /partial
         (83 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma06g10540.1                                                       166   7e-42
Glyma08g03210.2                                                       114   2e-26
Glyma08g03210.1                                                       113   4e-26
Glyma03g30770.1                                                        99   1e-21
Glyma19g33620.1                                                        95   2e-20
Glyma05g36370.1                                                        66   1e-11

>Glyma06g10540.1 
          Length = 685

 Score =  166 bits (419), Expect = 7e-42,   Method: Compositional matrix adjust.
 Identities = 74/83 (89%), Positives = 79/83 (95%)

Query: 1   CNHPVVMELILDSLRHWVAEYHVDGFRFDLASILCRGTDGSPLDSPPVIRAIAKDPILSR 60
           CNHPVVMELILDSLRHWV EYHVDGFRFDLAS+LCRG DGSPL++PP+IRAIAKD +LSR
Sbjct: 330 CNHPVVMELILDSLRHWVTEYHVDGFRFDLASVLCRGIDGSPLNAPPLIRAIAKDAVLSR 389

Query: 61  CKIIAEPWDCGGLYLVGKFPNWD 83
           CKIIAEPWDCGGLYLVG FPNWD
Sbjct: 390 CKIIAEPWDCGGLYLVGSFPNWD 412


>Glyma08g03210.2 
          Length = 630

 Score =  114 bits (286), Expect = 2e-26,   Method: Composition-based stats.
 Identities = 54/101 (53%), Positives = 63/101 (62%), Gaps = 19/101 (18%)

Query: 1   CNHPVVMELILDSLRHWVAEYHVDGFRFDLASILCRG-------------------TDGS 41
           CNHPVV + I+D LR+WV E HVDGFRFDLASI+ R                    T G+
Sbjct: 354 CNHPVVRQFIVDCLRYWVTEMHVDGFRFDLASIMTRSSSLWDGANVFGAPIEGDLLTTGT 413

Query: 42  PLDSPPVIRAIAKDPILSRCKIIAEPWDCGGLYLVGKFPNW 82
           PL SPP+I  I+ DPIL   K+IAE WD GGLY VG FP+W
Sbjct: 414 PLSSPPLIDLISNDPILCGVKLIAEAWDAGGLYQVGTFPHW 454


>Glyma08g03210.1 
          Length = 756

 Score =  113 bits (283), Expect = 4e-26,   Method: Composition-based stats.
 Identities = 54/101 (53%), Positives = 63/101 (62%), Gaps = 19/101 (18%)

Query: 1   CNHPVVMELILDSLRHWVAEYHVDGFRFDLASILCRG-------------------TDGS 41
           CNHPVV + I+D LR+WV E HVDGFRFDLASI+ R                    T G+
Sbjct: 354 CNHPVVRQFIVDCLRYWVTEMHVDGFRFDLASIMTRSSSLWDGANVFGAPIEGDLLTTGT 413

Query: 42  PLDSPPVIRAIAKDPILSRCKIIAEPWDCGGLYLVGKFPNW 82
           PL SPP+I  I+ DPIL   K+IAE WD GGLY VG FP+W
Sbjct: 414 PLSSPPLIDLISNDPILCGVKLIAEAWDAGGLYQVGTFPHW 454


>Glyma03g30770.1 
          Length = 598

 Score = 99.0 bits (245), Expect = 1e-21,   Method: Composition-based stats.
 Identities = 46/83 (55%), Positives = 58/83 (69%), Gaps = 1/83 (1%)

Query: 1   CNHPVVMELILDSLRHWVAEYHVDGFRFDLASILCRGTDGSPLDSPPVIRAIAKDPILSR 60
           CN+P+V  LILDSLRHWV E+H+DGF F  AS L RG  G  L  PP++ AIA DP+LS+
Sbjct: 240 CNYPIVQSLILDSLRHWVTEFHIDGFSFLNASHLLRGFHGEYLTRPPLVEAIAFDPVLSK 299

Query: 61  CKIIAEPWDCGGLYLVG-KFPNW 82
            KIIA+ WD  G+     +FP+W
Sbjct: 300 TKIIADCWDPHGMVAKEIRFPHW 322


>Glyma19g33620.1 
          Length = 671

 Score = 94.7 bits (234), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 46/83 (55%), Positives = 58/83 (69%), Gaps = 1/83 (1%)

Query: 1   CNHPVVMELILDSLRHWVAEYHVDGFRFDLASILCRGTDGSPLDSPPVIRAIAKDPILSR 60
           CN+P+V  LILDSLRHWV E+H+DGF F  AS L RG  G  L  PP++ AIA DP+LS+
Sbjct: 299 CNYPIVQNLILDSLRHWVTEFHIDGFSFINASHLLRGFHGEYLSRPPLVEAIAFDPVLSK 358

Query: 61  CKIIAEPWDCGGLYLVG-KFPNW 82
            KIIA+ WD  G+     +FP+W
Sbjct: 359 TKIIADCWDPHGMVAKEIRFPHW 381


>Glyma05g36370.1 
          Length = 399

 Score = 65.9 bits (159), Expect = 1e-11,   Method: Composition-based stats.
 Identities = 28/45 (62%), Positives = 33/45 (73%)

Query: 38 TDGSPLDSPPVIRAIAKDPILSRCKIIAEPWDCGGLYLVGKFPNW 82
          T G+PL SPP+I  I+ DPIL   K+IAE WD GGLY VG FP+W
Sbjct: 18 TTGAPLSSPPLIDLISNDPILCGVKLIAEAWDAGGLYQVGTFPHW 62