Jatropha Genome Database

JcCB0189041.20
Show Alignment:  
BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCB0189041.20 - phase: 2 /partial
         (196 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma10g30410.1                                                       243   8e-65
Glyma20g36750.1                                                       224   4e-59
Glyma03g40730.1                                                       211   4e-55
Glyma19g43420.1                                                       187   8e-48
Glyma20g36750.2                                                        94   7e-20
Glyma17g24450.1                                                        80   1e-15
Glyma20g04220.1                                                        80   1e-15
Glyma04g08290.1                                                        78   7e-15
Glyma04g08290.2                                                        78   7e-15
Glyma06g08390.1                                                        76   2e-14
Glyma06g08390.2                                                        76   2e-14
Glyma14g20040.1                                                        72   5e-13

>Glyma10g30410.1 
          Length = 417

 Score =  243 bits (621), Expect = 8e-65,   Method: Compositional matrix adjust.
 Identities = 122/175 (69%), Positives = 146/175 (83%), Gaps = 3/175 (1%)

Query: 15  KQAHLTELETQVAQLRVENSSLLKRLSDISNKYNDASVDNRVLKADVETLRAKVKMAEET 74
           KQAHLT+LETQV+QLR ENS+LLKRL+D+S KY+D++VDNRVLKADVETLRAKVKMAEET
Sbjct: 239 KQAHLTDLETQVSQLRGENSTLLKRLTDVSQKYSDSAVDNRVLKADVETLRAKVKMAEET 298

Query: 75  VKRITGLNPLSHSMPEISTISMPSFDG-SPSDTLTDAAVPIQDEPKRLYQLP--NNPLST 131
           VKRITGLNP+ H+M +IS++ +PSFDG SPSDT  DA+VP+QD+P   +  P  NNP+ +
Sbjct: 299 VKRITGLNPMPHAMSDISSLGLPSFDGRSPSDTSADASVPVQDDPHHHFYQPTLNNPIPS 358

Query: 132 RDPRVNNGLTNISSAENIQPPSGTAGLAGNKIGRTASLQRVASLEHLQKRICGTP 186
            DP VNNGL  ISS EN+Q  +  A + GNKIG+TASLQRVASLEHLQKRI G P
Sbjct: 359 HDPIVNNGLGGISSIENVQQQNAAAVVGGNKIGQTASLQRVASLEHLQKRIRGGP 413


>Glyma20g36750.1 
          Length = 403

 Score =  224 bits (571), Expect = 4e-59,   Method: Compositional matrix adjust.
 Identities = 115/167 (68%), Positives = 137/167 (82%), Gaps = 4/167 (2%)

Query: 15  KQAHLTELETQVAQLRVENSSLLKRLSDISNKYNDASVDNRVLKADVETLRAKVKMAEET 74
           KQAHLT+LETQV+QLR ENS+LLKRL+D+S KY+D++VDNRVLKADVETLR KVKMAEET
Sbjct: 238 KQAHLTDLETQVSQLRGENSTLLKRLTDVSQKYSDSAVDNRVLKADVETLRTKVKMAEET 297

Query: 75  VKRITGLNPLSHSMPEISTISMPSFDG-SPSDTLTDAAVPIQDEPKRLYQLP--NNPLST 131
           VKRITGLNPL H+M +IS++ +PSFDG SPSDT  DAAVP+QD+P   +  P   NP+ +
Sbjct: 298 VKRITGLNPLLHAMSDISSLGLPSFDGRSPSDTSADAAVPVQDDPHHHFYQPTSTNPIPS 357

Query: 132 RDPRVNNGLTNISSAENIQPPSGTAGLAGNKIGRTASLQRVASLEHL 178
            DP VNNGL  ISS EN+Q  +    L GNK+G+TASLQRVASLEHL
Sbjct: 358 HDPIVNNGLGGISSIENVQQNAAVV-LGGNKMGQTASLQRVASLEHL 403


>Glyma03g40730.1 
          Length = 414

 Score =  211 bits (537), Expect = 4e-55,   Method: Compositional matrix adjust.
 Identities = 112/170 (65%), Positives = 133/170 (78%), Gaps = 10/170 (5%)

Query: 15  KQAHLTELETQVAQLRVENSSLLKRLSDISNKYNDASVDNRVLKADVETLRAKVKMAEET 74
           KQAHLTELETQV+QLR ENSSLLKR +D+S KY++A+VDNRVLKADVETLRAKVKMAEET
Sbjct: 245 KQAHLTELETQVSQLRSENSSLLKRFTDVSQKYSNAAVDNRVLKADVETLRAKVKMAEET 304

Query: 75  VKRITGLNPLSHSMPEISTISMPSFDGSPSDTLTDAAVPIQDEPKRLYQLPNNPLSTRDP 134
           VKRITGL+P+ H+M E+S++ MP FD SPS+T  DAAVP+Q++       PN+ L    P
Sbjct: 305 VKRITGLSPMLHAMTEMSSLGMPLFDESPSETSADAAVPVQED-------PNHHLC--QP 355

Query: 135 RVNNGLTNISSAENIQPPSGTAGLAGNKIGRTASLQRVASLEHLQKRICG 184
             NNGL  ISS E +Q  +  A + GNK+GRT SL RVASLEHLQKRI G
Sbjct: 356 TSNNGLGGISSIETVQ-QNVAAVVGGNKMGRTTSLHRVASLEHLQKRIRG 404


>Glyma19g43420.1 
          Length = 341

 Score =  187 bits (474), Expect = 8e-48,   Method: Compositional matrix adjust.
 Identities = 105/183 (57%), Positives = 122/183 (66%), Gaps = 40/183 (21%)

Query: 15  KQAHLTELETQVAQLRVENSSLLKRLSDISNKYNDASVDNRVLKADVETLRAKVKMAEET 74
           KQAHLTELETQV+QLR ENSSLLKR +D+S KYN+A+VDNRVLKADVETLR KVKMAEET
Sbjct: 197 KQAHLTELETQVSQLRSENSSLLKRFTDVSQKYNNAAVDNRVLKADVETLRTKVKMAEET 256

Query: 75  VKRITGLNPLSHSMPEISTISMPSFDGSPSDTLTDAAVPIQDEPKRLYQLPNNPLSTRDP 134
           VKRITGLNP+ H++ E+S+++MPSFD SPS+T  DAAV                      
Sbjct: 257 VKRITGLNPMLHAITEMSSMAMPSFDESPSETSADAAV---------------------- 294

Query: 135 RVNNGLTNISSAENIQPPSGTAGLAGNKIGRTASLQRVASLEHLQKRICGTPC--GPQSN 192
                      ++N+      A + GNK GRT SL RVASLEHLQKRI G     GP SN
Sbjct: 295 -----------SQNV-----AAVVGGNKTGRTTSLHRVASLEHLQKRIRGGADSRGPPSN 338

Query: 193 VEQ 195
            EQ
Sbjct: 339 GEQ 341


>Glyma20g36750.2 
          Length = 303

 Score = 94.4 bits (233), Expect = 7e-20,   Method: Compositional matrix adjust.
 Identities = 44/56 (78%), Positives = 53/56 (94%)

Query: 15  KQAHLTELETQVAQLRVENSSLLKRLSDISNKYNDASVDNRVLKADVETLRAKVKM 70
           KQAHLT+LETQV+QLR ENS+LLKRL+D+S KY+D++VDNRVLKADVETLR KVK+
Sbjct: 238 KQAHLTDLETQVSQLRGENSTLLKRLTDVSQKYSDSAVDNRVLKADVETLRTKVKL 293


>Glyma17g24450.1 
          Length = 360

 Score = 80.5 bits (197), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 37/65 (56%), Positives = 52/65 (80%)

Query: 15  KQAHLTELETQVAQLRVENSSLLKRLSDISNKYNDASVDNRVLKADVETLRAKVKMAEET 74
           KQAHL +LE QV +LR+EN++L K+L+D S ++ +A  +NRVLK+DVE LRAKVK+AE+ 
Sbjct: 163 KQAHLADLEWQVERLRLENANLFKQLTDASQQFREADTNNRVLKSDVEALRAKVKLAEDM 222

Query: 75  VKRIT 79
           + R T
Sbjct: 223 ITRGT 227


>Glyma20g04220.1 
          Length = 67

 Score = 80.5 bits (197), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 39/53 (73%), Positives = 44/53 (83%)

Query: 15 KQAHLTELETQVAQLRVENSSLLKRLSDISNKYNDASVDNRVLKADVETLRAK 67
          KQ HLTEL TQV+QLR ENSSLLKR  D+S KYN+ ++DNRVLK DVETLR K
Sbjct: 15 KQTHLTELGTQVSQLRSENSSLLKRFIDVSPKYNNVAIDNRVLKVDVETLRVK 67


>Glyma04g08290.1 
          Length = 300

 Score = 77.8 bits (190), Expect = 7e-15,   Method: Compositional matrix adjust.
 Identities = 39/70 (55%), Positives = 52/70 (74%), Gaps = 2/70 (2%)

Query: 15  KQAHLTELETQVAQLRVENSSLLKRLSDISNKYNDASVDNRVLKADVETLRAKVKMAEET 74
           KQA L+ELE QV +L+VEN++L K+ +D S  + +A  +NRVLK+DVE LRAKVK+AE+ 
Sbjct: 149 KQAQLSELELQVEKLKVENATLYKQFTDASQHFREADTNNRVLKSDVEALRAKVKLAEDM 208

Query: 75  VKR--ITGLN 82
           V R   T LN
Sbjct: 209 VTRSSFTTLN 218


>Glyma04g08290.2 
          Length = 257

 Score = 77.8 bits (190), Expect = 7e-15,   Method: Compositional matrix adjust.
 Identities = 39/70 (55%), Positives = 52/70 (74%), Gaps = 2/70 (2%)

Query: 15  KQAHLTELETQVAQLRVENSSLLKRLSDISNKYNDASVDNRVLKADVETLRAKVKMAEET 74
           KQA L+ELE QV +L+VEN++L K+ +D S  + +A  +NRVLK+DVE LRAKVK+AE+ 
Sbjct: 106 KQAQLSELELQVEKLKVENATLYKQFTDASQHFREADTNNRVLKSDVEALRAKVKLAEDM 165

Query: 75  VKR--ITGLN 82
           V R   T LN
Sbjct: 166 VTRSSFTTLN 175


>Glyma06g08390.1 
          Length = 288

 Score = 76.3 bits (186), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 38/70 (54%), Positives = 52/70 (74%), Gaps = 2/70 (2%)

Query: 15  KQAHLTELETQVAQLRVENSSLLKRLSDISNKYNDASVDNRVLKADVETLRAKVKMAEET 74
           KQA L++LE QV +L+VEN++L K+ +D S  + +A  +NRVLK+DVE LRAKVK+AE+ 
Sbjct: 142 KQAQLSDLELQVEKLKVENATLYKQFTDASQHFREADTNNRVLKSDVEALRAKVKLAEDM 201

Query: 75  VKR--ITGLN 82
           V R   T LN
Sbjct: 202 VTRSSFTTLN 211


>Glyma06g08390.2 
          Length = 252

 Score = 75.9 bits (185), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 38/70 (54%), Positives = 52/70 (74%), Gaps = 2/70 (2%)

Query: 15  KQAHLTELETQVAQLRVENSSLLKRLSDISNKYNDASVDNRVLKADVETLRAKVKMAEET 74
           KQA L++LE QV +L+VEN++L K+ +D S  + +A  +NRVLK+DVE LRAKVK+AE+ 
Sbjct: 106 KQAQLSDLELQVEKLKVENATLYKQFTDASQHFREADTNNRVLKSDVEALRAKVKLAEDM 165

Query: 75  VKR--ITGLN 82
           V R   T LN
Sbjct: 166 VTRSSFTTLN 175


>Glyma14g20040.1 
          Length = 255

 Score = 71.6 bits (174), Expect = 5e-13,   Method: Compositional matrix adjust.
 Identities = 35/69 (50%), Positives = 53/69 (76%), Gaps = 1/69 (1%)

Query: 20  TELETQVAQLRVENSSLLKRLSDISNKYNDASVDNRVLKADVETLRAKVKMAEETVKRIT 79
           T++E  V +LR+EN++L K+L+D S ++ DA  +NRVLK+DVE LRAKVK+AE+ V R T
Sbjct: 105 TDVEGGVERLRLENANLFKQLTDASQQFRDADTNNRVLKSDVEALRAKVKLAEDMVTRGT 164

Query: 80  GLNPLSHSM 88
            L P+++ +
Sbjct: 165 -LTPINNQI 172