Jatropha Genome Database

JcCB0188331.10
Show Alignment:  
BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCB0188331.10 + phase: 2 /pseudo/partial
         (139 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma04g09780.1                                                       161   2e-40
Glyma06g09860.1                                                       159   7e-40
Glyma14g03960.1                                                       157   4e-39
Glyma02g44780.2                                                       154   2e-38
Glyma02g44780.1                                                       154   2e-38
Glyma14g03960.2                                                       154   2e-38

>Glyma04g09780.1 
          Length = 845

 Score =  161 bits (407), Expect = 2e-40,   Method: Composition-based stats.
 Identities = 71/100 (71%), Positives = 85/100 (85%)

Query: 21  GVKVEGILRQAAAVDDVKHRIREYEQGKTEFAADEDAHVIGDCVKYFLRELPSSPVPASC 80
           G  +EGILRQAA VD+V+ R+REYEQGK EF+ DEDAHV+GDCVK+ +RELPSSPVPASC
Sbjct: 181 GANIEGILRQAADVDEVERRVREYEQGKVEFSPDEDAHVVGDCVKHVIRELPSSPVPASC 240

Query: 81  CNALLQSFRTDRANRVNNMRVAILENFPEPNRRLLQRYLM 120
           C ALL++ RT+R +RV +MR AI + FPEPNRRLLQR LM
Sbjct: 241 CKALLEACRTERGSRVASMRAAINDTFPEPNRRLLQRILM 280


>Glyma06g09860.1 
          Length = 929

 Score =  159 bits (403), Expect = 7e-40,   Method: Composition-based stats.
 Identities = 71/100 (71%), Positives = 84/100 (84%)

Query: 21  GVKVEGILRQAAAVDDVKHRIREYEQGKTEFAADEDAHVIGDCVKYFLRELPSSPVPASC 80
           G  +EGILRQAA VD+V+ R+REYEQGK EF+ DEDAHV+GDCVK+ +RELPSSPVPASC
Sbjct: 199 GANIEGILRQAADVDEVERRVREYEQGKVEFSPDEDAHVVGDCVKHVIRELPSSPVPASC 258

Query: 81  CNALLQSFRTDRANRVNNMRVAILENFPEPNRRLLQRYLM 120
           C ALL++ RT+R +RV  MR AI + FPEPNRRLLQR LM
Sbjct: 259 CKALLEACRTERGSRVAAMRAAINDTFPEPNRRLLQRILM 298


>Glyma14g03960.1 
          Length = 866

 Score =  157 bits (396), Expect = 4e-39,   Method: Composition-based stats.
 Identities = 71/100 (71%), Positives = 84/100 (84%), Gaps = 1/100 (1%)

Query: 21  GVKVEGILRQAAAVDDVKHRIREYEQGKTEFAADEDAHVIGDCVKYFLRELPSSPVPASC 80
           G KVEGILRQ+A V++V  R++EYEQGKTEF  +EDAHV+GDCVK+ LRELPSSPVPASC
Sbjct: 195 GTKVEGILRQSADVEEVDRRVQEYEQGKTEFGPEEDAHVVGDCVKHVLRELPSSPVPASC 254

Query: 81  CNALLQSFRTDRAN-RVNNMRVAILENFPEPNRRLLQRYL 119
           C ALL++++ DR   R+N MR AILE FPEPNRRLLQR L
Sbjct: 255 CTALLEAYKIDRKEARINAMRCAILETFPEPNRRLLQRIL 294


>Glyma02g44780.2 
          Length = 859

 Score =  154 bits (390), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 71/100 (71%), Positives = 84/100 (84%), Gaps = 1/100 (1%)

Query: 21  GVKVEGILRQAAAVDDVKHRIREYEQGKTEFAADEDAHVIGDCVKYFLRELPSSPVPASC 80
           G KVEGILRQ+A V++V  R++EYEQGKTEF  +EDAHV+GDCVK+ LRELPSSPVPASC
Sbjct: 185 GTKVEGILRQSADVEEVDRRVQEYEQGKTEFGPEEDAHVVGDCVKHVLRELPSSPVPASC 244

Query: 81  CNALLQSFRTDRAN-RVNNMRVAILENFPEPNRRLLQRYL 119
           C ALL++++ DR   R+N MR AILE FPEPNRRLLQR L
Sbjct: 245 CTALLEAYKIDRKEARINAMRCAILETFPEPNRRLLQRIL 284


>Glyma02g44780.1 
          Length = 860

 Score =  154 bits (390), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 71/100 (71%), Positives = 84/100 (84%), Gaps = 1/100 (1%)

Query: 21  GVKVEGILRQAAAVDDVKHRIREYEQGKTEFAADEDAHVIGDCVKYFLRELPSSPVPASC 80
           G KVEGILRQ+A V++V  R++EYEQGKTEF  +EDAHV+GDCVK+ LRELPSSPVPASC
Sbjct: 185 GTKVEGILRQSADVEEVDRRVQEYEQGKTEFGPEEDAHVVGDCVKHVLRELPSSPVPASC 244

Query: 81  CNALLQSFRTDRAN-RVNNMRVAILENFPEPNRRLLQRYL 119
           C ALL++++ DR   R+N MR AILE FPEPNRRLLQR L
Sbjct: 245 CTALLEAYKIDRKEARINAMRCAILETFPEPNRRLLQRIL 284


>Glyma14g03960.2 
          Length = 764

 Score =  154 bits (389), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 71/100 (71%), Positives = 84/100 (84%), Gaps = 1/100 (1%)

Query: 21  GVKVEGILRQAAAVDDVKHRIREYEQGKTEFAADEDAHVIGDCVKYFLRELPSSPVPASC 80
           G KVEGILRQ+A V++V  R++EYEQGKTEF  +EDAHV+GDCVK+ LRELPSSPVPASC
Sbjct: 193 GTKVEGILRQSADVEEVDRRVQEYEQGKTEFGPEEDAHVVGDCVKHVLRELPSSPVPASC 252

Query: 81  CNALLQSFRTDRAN-RVNNMRVAILENFPEPNRRLLQRYL 119
           C ALL++++ DR   R+N MR AILE FPEPNRRLLQR L
Sbjct: 253 CTALLEAYKIDRKEARINAMRCAILETFPEPNRRLLQRIL 292