Jatropha Genome Database

JcCB0187931.10
Show Alignment:  
BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCB0187931.10 - phase: 1 /partial
         (229 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma04g02720.2                                                       219   2e-57
Glyma04g02720.1                                                       219   2e-57
Glyma06g02740.1                                                       184   5e-47
Glyma02g35850.1                                                       172   2e-43
Glyma10g09410.1                                                       170   1e-42
Glyma12g09860.1                                                       167   1e-41
Glyma02g35850.2                                                       145   5e-35
Glyma11g18400.1                                                       143   1e-34
Glyma10g11780.1                                                       118   4e-27
Glyma16g19460.1                                                        69   3e-12

>Glyma04g02720.2 
          Length = 343

 Score =  219 bits (558), Expect = 2e-57,   Method: Compositional matrix adjust.
 Identities = 115/205 (56%), Positives = 154/205 (75%), Gaps = 3/205 (1%)

Query: 26  RGCDGGGSKELDAHVNRLKAEVESLHAEEHRLDESIRQKQELLRSLEEDENNQRYLFMTE 85
           +GCDG G +EL+  VN LKAEV+SL+AEE +LD+ IR+KQELLR+LEE E++Q+YLF+T+
Sbjct: 138 KGCDGLGPRELEDQVNSLKAEVDSLYAEECKLDDCIRKKQELLRNLEESESSQKYLFITK 197

Query: 86  EDITSLPCFQNQTLIAIKAPQASYLEVPDPDEDIGC--PQYKMIVRSNTGPIDLYLLSKY 143
           EDI  LPCFQNQ +IAIKAP+AS +EVPDPDE++G    QYKMIVRS  GPI LYLLSK 
Sbjct: 198 EDILGLPCFQNQEIIAIKAPKASSIEVPDPDEELGFRQRQYKMIVRSAIGPIYLYLLSKD 257

Query: 144 NQQHEDVAVKQVNPLTSTSPKCCPHRMETEGLSFEQHYQNNNAEMFNSLYSESSGIQKII 203
           + + ED + K +  LT+ S     +R    GL   Q+ +NN +E F+   S++ GIQ+I 
Sbjct: 258 DHKFEDDSAKPMK-LTNPSWNSDLYRKRGVGLLESQNDENNPSERFSLQGSQAFGIQEIT 316

Query: 204 PSDCDIDDDYWFRSNPEVSTSELWG 228
           P+D +++DDYWF+S+P VS +ELWG
Sbjct: 317 PTDFEMEDDYWFQSDPGVSQTELWG 341


>Glyma04g02720.1 
          Length = 343

 Score =  219 bits (558), Expect = 2e-57,   Method: Compositional matrix adjust.
 Identities = 115/205 (56%), Positives = 154/205 (75%), Gaps = 3/205 (1%)

Query: 26  RGCDGGGSKELDAHVNRLKAEVESLHAEEHRLDESIRQKQELLRSLEEDENNQRYLFMTE 85
           +GCDG G +EL+  VN LKAEV+SL+AEE +LD+ IR+KQELLR+LEE E++Q+YLF+T+
Sbjct: 138 KGCDGLGPRELEDQVNSLKAEVDSLYAEECKLDDCIRKKQELLRNLEESESSQKYLFITK 197

Query: 86  EDITSLPCFQNQTLIAIKAPQASYLEVPDPDEDIGC--PQYKMIVRSNTGPIDLYLLSKY 143
           EDI  LPCFQNQ +IAIKAP+AS +EVPDPDE++G    QYKMIVRS  GPI LYLLSK 
Sbjct: 198 EDILGLPCFQNQEIIAIKAPKASSIEVPDPDEELGFRQRQYKMIVRSAIGPIYLYLLSKD 257

Query: 144 NQQHEDVAVKQVNPLTSTSPKCCPHRMETEGLSFEQHYQNNNAEMFNSLYSESSGIQKII 203
           + + ED + K +  LT+ S     +R    GL   Q+ +NN +E F+   S++ GIQ+I 
Sbjct: 258 DHKFEDDSAKPMK-LTNPSWNSDLYRKRGVGLLESQNDENNPSERFSLQGSQAFGIQEIT 316

Query: 204 PSDCDIDDDYWFRSNPEVSTSELWG 228
           P+D +++DDYWF+S+P VS +ELWG
Sbjct: 317 PTDFEMEDDYWFQSDPGVSQTELWG 341


>Glyma06g02740.1 
          Length = 325

 Score =  184 bits (468), Expect = 5e-47,   Method: Compositional matrix adjust.
 Identities = 105/207 (50%), Positives = 139/207 (67%), Gaps = 26/207 (12%)

Query: 26  RGCDGGGSKELDAHVNRLKAEVESLHAEEHRLDESIRQKQELLRSLEEDENNQRYLFMTE 85
           +GCDG G +EL+  VN LKAEV+SL+AEE  LD+ IR+KQELLR+LEE E++Q+YLF+T+
Sbjct: 139 KGCDGLGPQELEDQVNSLKAEVDSLYAEESELDDCIRKKQELLRNLEESESSQKYLFLTK 198

Query: 86  EDITSLPCFQNQTLIAIKAPQASYLEVPDPDEDIGC--PQYKMIVRSNTGPIDLYLLSKY 143
           EDI SLPCFQNQ +IAIKAP+AS +EVPDPDE++G    QYKMIVRS  GPI+LYLLSK+
Sbjct: 199 EDILSLPCFQNQEIIAIKAPKASCIEVPDPDEELGFRQRQYKMIVRSAIGPINLYLLSKF 258

Query: 144 NQQHEDVAVKQVNPLTSTSPKCCPHRMETEGLSFEQHYQNNNAEMFNSLYSESSGIQKII 203
               ED + K++  L   S    P R         +H +                 +K++
Sbjct: 259 ----EDDSAKRMK-LMDPSWNSDPIRKRV--CRVHKHLE----------------FKKLL 295

Query: 204 PSDCD-IDDDYWFRSNPEVSTSELWGN 229
           P     ++DDYWF+S+P VS +ELWG+
Sbjct: 296 PRILKYMEDDYWFQSDPGVSQTELWGS 322


>Glyma02g35850.1 
          Length = 468

 Score =  172 bits (437), Expect = 2e-43,   Method: Compositional matrix adjust.
 Identities = 93/213 (43%), Positives = 134/213 (62%), Gaps = 11/213 (5%)

Query: 26  RGCDGGGSKELDAHVNRLKAEVESLHAEEHRLDESIRQKQELLRSLEEDENNQRYLFMTE 85
           +G +   S E+D  ++ LKAEVE L  EE  LD+ IR+ QE LR+L E+ENNQ+ LF+TE
Sbjct: 212 KGIESSTSGEVDGDISVLKAEVEKLSLEEQGLDDQIREMQERLRNLSENENNQKCLFVTE 271

Query: 86  EDITSLPCFQNQTLIAIKAPQASYLEVPDPDEDIGCPQ--YKMIVRSNTGPIDLYLLSKY 143
           EDI  LPCFQN+TLIAIKAP  + LEVPDP+E +  PQ  Y++I+RS  GPID+YL+S++
Sbjct: 272 EDIKGLPCFQNETLIAIKAPHGTTLEVPDPEEAVDYPQRRYRIILRSTMGPIDVYLISQF 331

Query: 144 NQQHEDV--AVKQVNPLTSTS-------PKCCPHRMETEGLSFEQHYQNNNAEMFNSLYS 194
            ++ E+V  A   + PL S+S        +  P     + L  +    ++     N+   
Sbjct: 332 EEKFEEVNGAELPMIPLASSSGSNEQLMTEMVPAECSGKELEPQTQLSSHAFSDLNASQE 391

Query: 195 ESSGIQKIIPSDCDIDDDYWFRSNPEVSTSELW 227
            + G+ KI+PSD D D DYW  S+ +VS +++W
Sbjct: 392 FAGGMMKIVPSDVDNDADYWLLSDADVSITDMW 424


>Glyma10g09410.1 
          Length = 466

 Score =  170 bits (430), Expect = 1e-42,   Method: Compositional matrix adjust.
 Identities = 88/211 (41%), Positives = 133/211 (63%), Gaps = 9/211 (4%)

Query: 26  RGCDGGGSKELDAHVNRLKAEVESLHAEEHRLDESIRQKQELLRSLEEDENNQRYLFMTE 85
           +G +   S ++D  ++ LKAEVE L  EE  +D+ IR+ QE LR+L E+ENNQ+ LF+TE
Sbjct: 212 KGIESATSGDVDGDISLLKAEVEKLSLEEQGIDDQIREMQERLRNLSENENNQKCLFVTE 271

Query: 86  EDITSLPCFQNQTLIAIKAPQASYLEVPDPDEDIGCPQ--YKMIVRSNTGPIDLYLLSKY 143
           EDI  LPCFQN+TLIAIKAP  + LEVPDP+E +  PQ  Y++I+RS  GPID+YL+S++
Sbjct: 272 EDIKDLPCFQNETLIAIKAPHGTTLEVPDPEEAVDYPQRRYRIILRSTMGPIDVYLISQF 331

Query: 144 NQQHEDVAVKQVNPLTSTSPKCCPHRMETE-------GLSFEQHYQNNNAEMFNSLYSES 196
            ++ E+V   ++  +   S      ++ TE       G   E   Q ++    ++    +
Sbjct: 332 EEKFEEVNGAELPMIPLASSSGSNEQLMTEIVTAECSGKELEPQTQLSSHAFSDASQEFA 391

Query: 197 SGIQKIIPSDCDIDDDYWFRSNPEVSTSELW 227
            G+ KI+PSD D D DYW  S+ ++S +++W
Sbjct: 392 GGMMKIVPSDVDNDADYWLLSDADISITDMW 422


>Glyma12g09860.1 
          Length = 450

 Score =  167 bits (422), Expect = 1e-41,   Method: Compositional matrix adjust.
 Identities = 92/210 (43%), Positives = 128/210 (60%), Gaps = 8/210 (3%)

Query: 26  RGCDGGGSKELDAHVNRLKAEVESLHAEEHRLDESIRQKQELLRSLEEDENNQRYLFMTE 85
           +G D     E D     L+AEVE+L  +E +LDE IR+ QE LR L EDENN + LF+TE
Sbjct: 195 KGLDVSRPGEADDSFASLQAEVENLTMKERQLDEQIREMQERLRDLSEDENNDKLLFVTE 254

Query: 86  EDITSLPCFQNQTLIAIKAPQASYLEVPDPDEDIGCPQ--YKMIVRSNTGPIDLYLLSKY 143
           EDI +LPCFQN+TLIAIKAP  + LEVPDPDE +   Q  Y++++RS  GPIDLYL+S++
Sbjct: 255 EDIKNLPCFQNETLIAIKAPHGTTLEVPDPDEAVDYLQRRYRIVLRSTMGPIDLYLVSQF 314

Query: 144 NQQHEDVAVKQVNPLTSTSPKCCPHRMETEGLSFEQH--YQNNNAEMFNSLYSES----S 197
            ++ E++    V P   +SP     +         +H   Q   A   +S ++ S    S
Sbjct: 315 EEKFEEINGADVAPKLPSSPDVTKQQSTVVPEDRGKHIEVQGQAAPGPSSDFTPSQDFVS 374

Query: 198 GIQKIIPSDCDIDDDYWFRSNPEVSTSELW 227
           GI KI+PSD   + DYW  S+ +VS +++W
Sbjct: 375 GIMKIVPSDVASEADYWLLSDADVSITDMW 404


>Glyma02g35850.2 
          Length = 421

 Score =  145 bits (365), Expect = 5e-35,   Method: Compositional matrix adjust.
 Identities = 84/218 (38%), Positives = 122/218 (55%), Gaps = 28/218 (12%)

Query: 21  LMTICRGCDGGGSKELDAHVNRLKAEVESLHAEEHRLDESIRQKQELLRSLEEDENNQRY 80
           +  +C G +   S E+D  ++ LKAEVE L  EE  LD+ IR                  
Sbjct: 177 IFLLCMGIESSTSGEVDGDISVLKAEVEKLSLEEQGLDDQIR-----------------C 219

Query: 81  LFMTEEDITSLPCFQNQTLIAIKAPQASYLEVPDPDEDIGCPQ--YKMIVRSNTGPIDLY 138
           LF+TEEDI  LPCFQN+TLIAIKAP  + LEVPDP+E +  PQ  Y++I+RS  GPID+Y
Sbjct: 220 LFVTEEDIKGLPCFQNETLIAIKAPHGTTLEVPDPEEAVDYPQRRYRIILRSTMGPIDVY 279

Query: 139 LLSKYNQQHEDV--AVKQVNPLTSTS-------PKCCPHRMETEGLSFEQHYQNNNAEMF 189
           L+S++ ++ E+V  A   + PL S+S        +  P     + L  +    ++     
Sbjct: 280 LISQFEEKFEEVNGAELPMIPLASSSGSNEQLMTEMVPAECSGKELEPQTQLSSHAFSDL 339

Query: 190 NSLYSESSGIQKIIPSDCDIDDDYWFRSNPEVSTSELW 227
           N+    + G+ KI+PSD D D DYW  S+ +VS +++W
Sbjct: 340 NASQEFAGGMMKIVPSDVDNDADYWLLSDADVSITDMW 377


>Glyma11g18400.1 
          Length = 296

 Score =  143 bits (361), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 84/210 (40%), Positives = 116/210 (55%), Gaps = 25/210 (11%)

Query: 26  RGCDGGGSKELDAHVNRLKAEVESLHAEEHRLDESIRQKQELLRSLEEDENNQRYLFMTE 85
           +G D     E D     L+AEVE+L  +E +LDE IR                  LF+TE
Sbjct: 58  KGLDVSRPGEADDSFPSLQAEVENLTMKERQLDEQIR-----------------LLFVTE 100

Query: 86  EDITSLPCFQNQTLIAIKAPQASYLEVPDPDEDIGCPQ--YKMIVRSNTGPIDLYLLSKY 143
           EDI +LPCFQN+TLIAIKAP  + LEVPDPDE +  PQ  Y++++RS  GPIDLYL+S++
Sbjct: 101 EDIKNLPCFQNETLIAIKAPHGTTLEVPDPDEAVDYPQRRYRIVLRSTMGPIDLYLVSQF 160

Query: 144 NQQHEDVAVKQVNPLTSTSPKCCPHRM----ETEGLSFEQHYQN--NNAEMFNSLYSESS 197
            ++ E++    V P   +SP    H+     E  G   E   Q     +  F +     S
Sbjct: 161 EEKFEEINGVDVAPKLPSSPDGTKHQSTVVPEDRGKDIEVQGQEAPGPSSDFTTSQDFVS 220

Query: 198 GIQKIIPSDCDIDDDYWFRSNPEVSTSELW 227
           GI KI+PSD   + DYW  S+ +VS +++W
Sbjct: 221 GIMKIVPSDVASEADYWLLSDADVSITDMW 250


>Glyma10g11780.1 
          Length = 228

 Score =  118 bits (296), Expect = 4e-27,   Method: Compositional matrix adjust.
 Identities = 71/156 (45%), Positives = 96/156 (61%), Gaps = 20/156 (12%)

Query: 74  DENNQRYLFMTEEDITSLPCFQNQTLIAIKAPQASYLEVPDPDEDIGCPQYKMIVRSNTG 133
           D+N  RYL              NQ +IAIKAP+AS +EVPDPDE      YKMIVRS  G
Sbjct: 90  DDNLLRYLI-------------NQEIIAIKAPKASCIEVPDPDE------YKMIVRSAIG 130

Query: 134 PIDLYLLSKYNQQHEDVAVKQVNPLTSTSPKCCPHRMETEGLSFEQHYQNNNAEMFNSLY 193
           PI+LYLLSK +++ ED + K++  L   S    P R    GL   QH + N +E F+   
Sbjct: 131 PINLYLLSKDDRKFEDDSAKRMK-LMDPSWNSDPIRKRGVGLLESQHDEKNPSERFSLQG 189

Query: 194 SESSGIQKIIPSDCDIDDDYWFRSNPEVSTSELWGN 229
           S++ GIQ+I P+  +++DDYWF+S+P VS +ELWG+
Sbjct: 190 SQAFGIQEITPTGFEMEDDYWFQSDPGVSQTELWGS 225


>Glyma16g19460.1 
          Length = 224

 Score = 69.3 bits (168), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 30/41 (73%), Positives = 36/41 (87%)

Query: 79  RYLFMTEEDITSLPCFQNQTLIAIKAPQASYLEVPDPDEDI 119
           RYLF+ +EDI SLPCFQNQ +IAIKAP+AS +EVPDPDE +
Sbjct: 120 RYLFLIKEDILSLPCFQNQEIIAIKAPKASCIEVPDPDEAV 160