Jatropha Genome Database

JcCB0187481.10
Show Alignment:  
BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCB0187481.10 + phase: 0 /partial
         (147 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma05g31830.1                                                       192   1e-49
Glyma08g15100.1                                                       188   2e-48
Glyma08g15100.2                                                       187   2e-48
Glyma14g34990.1                                                       172   1e-43

>Glyma05g31830.1 
          Length = 241

 Score =  192 bits (487), Expect = 1e-49,   Method: Compositional matrix adjust.
 Identities = 95/138 (68%), Positives = 114/138 (82%), Gaps = 8/138 (5%)

Query: 1   MAFPSRLLSRSKQLYGSQVILQQDHAIPVRYFAKKADPPSQKGDSPPRLKGDELLKGIFL 60
           MA  SRL S+SK +YGSQ++LQ++HAIPVR+FAK++        +PP LKGDE+LK IF+
Sbjct: 1   MALSSRLFSKSKLIYGSQILLQKEHAIPVRHFAKES--------APPALKGDEMLKNIFV 52

Query: 61  EVKKKYETAVGILKKEKITIAPEDPSAVSQYAKIMKTIREKAGLFSESERIKFTIETQTV 120
           EVK K+ETA+GILKKEKITI PEDP+AVS YAK+MKTIREKA L SES+ I  TIE +T 
Sbjct: 53  EVKNKFETAIGILKKEKITIDPEDPAAVSHYAKVMKTIREKASLLSESQDILSTIEIETQ 112

Query: 121 DIPDARTYLLTLKEIRIK 138
           DIPDARTYLLTLKEIR+K
Sbjct: 113 DIPDARTYLLTLKEIRVK 130


>Glyma08g15100.1 
          Length = 241

 Score =  188 bits (478), Expect = 2e-48,   Method: Compositional matrix adjust.
 Identities = 92/138 (66%), Positives = 113/138 (81%), Gaps = 8/138 (5%)

Query: 1   MAFPSRLLSRSKQLYGSQVILQQDHAIPVRYFAKKADPPSQKGDSPPRLKGDELLKGIFL 60
           MA  SRL S+SK +YG Q++LQ++HAIPVR+FAK++        +PP LKGD++LK IF+
Sbjct: 1   MALSSRLFSKSKLIYGCQILLQKEHAIPVRHFAKES--------APPALKGDQMLKNIFV 52

Query: 61  EVKKKYETAVGILKKEKITIAPEDPSAVSQYAKIMKTIREKAGLFSESERIKFTIETQTV 120
           EVK K+ETA+GILKKEKITI PEDP+AVS YAK+MKT+REKA L SES+ I  TIE +T 
Sbjct: 53  EVKNKFETAIGILKKEKITIDPEDPAAVSHYAKVMKTVREKASLLSESQDILSTIEIETQ 112

Query: 121 DIPDARTYLLTLKEIRIK 138
           DIPDARTYLLTLKEIR+K
Sbjct: 113 DIPDARTYLLTLKEIRVK 130


>Glyma08g15100.2 
          Length = 222

 Score =  187 bits (476), Expect = 2e-48,   Method: Compositional matrix adjust.
 Identities = 92/138 (66%), Positives = 113/138 (81%), Gaps = 8/138 (5%)

Query: 1   MAFPSRLLSRSKQLYGSQVILQQDHAIPVRYFAKKADPPSQKGDSPPRLKGDELLKGIFL 60
           MA  SRL S+SK +YG Q++LQ++HAIPVR+FAK++        +PP LKGD++LK IF+
Sbjct: 1   MALSSRLFSKSKLIYGCQILLQKEHAIPVRHFAKES--------APPALKGDQMLKNIFV 52

Query: 61  EVKKKYETAVGILKKEKITIAPEDPSAVSQYAKIMKTIREKAGLFSESERIKFTIETQTV 120
           EVK K+ETA+GILKKEKITI PEDP+AVS YAK+MKT+REKA L SES+ I  TIE +T 
Sbjct: 53  EVKNKFETAIGILKKEKITIDPEDPAAVSHYAKVMKTVREKASLLSESQDILSTIEIETQ 112

Query: 121 DIPDARTYLLTLKEIRIK 138
           DIPDARTYLLTLKEIR+K
Sbjct: 113 DIPDARTYLLTLKEIRVK 130


>Glyma14g34990.1 
          Length = 210

 Score =  172 bits (436), Expect = 1e-43,   Method: Compositional matrix adjust.
 Identities = 85/125 (68%), Positives = 103/125 (82%), Gaps = 8/125 (6%)

Query: 14  LYGSQVILQQDHAIPVRYFAKKADPPSQKGDSPPRLKGDELLKGIFLEVKKKYETAVGIL 73
           +YGSQ++LQ++HAIPVR+FAK++        +PP LKGDE+LK IF+EVK K+ETA+GIL
Sbjct: 2   IYGSQILLQKEHAIPVRHFAKES--------APPALKGDEMLKNIFVEVKNKFETAIGIL 53

Query: 74  KKEKITIAPEDPSAVSQYAKIMKTIREKAGLFSESERIKFTIETQTVDIPDARTYLLTLK 133
           KKEKITI PEDP+ VS YAK+MKTIREKA L  ES+ I  TIE +T DIPDARTYLLTLK
Sbjct: 54  KKEKITIDPEDPAVVSHYAKVMKTIREKASLLPESQDILSTIEIETQDIPDARTYLLTLK 113

Query: 134 EIRIK 138
           EIR+K
Sbjct: 114 EIRVK 118