Jatropha Genome Database

JcCB0186021.10
Show Alignment:  
BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCB0186021.10 + phase: 0 
         (82 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma15g15800.1                                                       148   2e-36
Glyma09g05030.2                                                       147   2e-36
Glyma09g05030.1                                                       147   2e-36
Glyma07g37700.1                                                       123   5e-29

>Glyma15g15800.1 
          Length = 82

 Score =  148 bits (373), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 67/82 (81%), Positives = 75/82 (91%)

Query: 1  MQNDEGQNMDLYIPRKCSATNRLITSKDHASVQINIGHLDANGNYTGQFTTFALCGFVRA 60
          MQN+EGQ  +LYIPRKCSATNRLIT+KDHASVQINIGH+D NG Y G F+TFALCGF+RA
Sbjct: 1  MQNEEGQITELYIPRKCSATNRLITAKDHASVQINIGHVDENGVYNGHFSTFALCGFIRA 60

Query: 61 QGDADSALDRLWLKKKVELRQQ 82
          QGDADSALDRLW KKKVE++QQ
Sbjct: 61 QGDADSALDRLWQKKKVEVKQQ 82


>Glyma09g05030.2 
          Length = 82

 Score =  147 bits (372), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 66/82 (80%), Positives = 75/82 (91%)

Query: 1  MQNDEGQNMDLYIPRKCSATNRLITSKDHASVQINIGHLDANGNYTGQFTTFALCGFVRA 60
          MQN+EGQ  +LYIPRKCSATNRLIT+KDHASVQ+NIGH+D NG Y G F+TFALCGF+RA
Sbjct: 1  MQNEEGQITELYIPRKCSATNRLITAKDHASVQVNIGHVDENGVYNGHFSTFALCGFIRA 60

Query: 61 QGDADSALDRLWLKKKVELRQQ 82
          QGDADSALDRLW KKKVE++QQ
Sbjct: 61 QGDADSALDRLWQKKKVEVKQQ 82


>Glyma09g05030.1 
          Length = 82

 Score =  147 bits (372), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 66/82 (80%), Positives = 75/82 (91%)

Query: 1  MQNDEGQNMDLYIPRKCSATNRLITSKDHASVQINIGHLDANGNYTGQFTTFALCGFVRA 60
          MQN+EGQ  +LYIPRKCSATNRLIT+KDHASVQ+NIGH+D NG Y G F+TFALCGF+RA
Sbjct: 1  MQNEEGQITELYIPRKCSATNRLITAKDHASVQVNIGHVDENGVYNGHFSTFALCGFIRA 60

Query: 61 QGDADSALDRLWLKKKVELRQQ 82
          QGDADSALDRLW KKKVE++QQ
Sbjct: 61 QGDADSALDRLWQKKKVEVKQQ 82


>Glyma07g37700.1 
          Length = 89

 Score =  123 bits (308), Expect = 5e-29,   Method: Compositional matrix adjust.
 Identities = 61/89 (68%), Positives = 69/89 (77%), Gaps = 7/89 (7%)

Query: 1  MQNDEGQNMDLYIPRKC-------SATNRLITSKDHASVQINIGHLDANGNYTGQFTTFA 53
          MQN+EG+   LY+PRK        SATNRLIT+KDHASVQINIGHLD NG Y G F+T A
Sbjct: 1  MQNEEGKLTGLYVPRKWYYHVRCNSATNRLITAKDHASVQINIGHLDENGIYNGHFSTSA 60

Query: 54 LCGFVRAQGDADSALDRLWLKKKVELRQQ 82
          L GFVRAQGDA+SALDRLW KKK E++Q 
Sbjct: 61 LSGFVRAQGDANSALDRLWQKKKAEVKQH 89