Jatropha Genome Database

JcCB0185581.10
Show Alignment:  
BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCB0185581.10 + phase: 0 /partial
         (265 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma05g20510.1                                                       345   2e-95
Glyma17g18490.1                                                       343   1e-94
Glyma01g23820.1                                                       105   4e-23
Glyma01g23820.3                                                       105   5e-23
Glyma08g36840.1                                                        95   7e-20
Glyma01g23820.2                                                        84   2e-16
Glyma04g00940.1                                                        69   6e-12
Glyma10g11570.1                                                        65   9e-11
Glyma12g13520.1                                                        60   2e-09

>Glyma05g20510.1 
          Length = 402

 Score =  345 bits (886), Expect = 2e-95,   Method: Compositional matrix adjust.
 Identities = 159/187 (85%), Positives = 173/187 (92%)

Query: 79  GRYLNGESRVERAWAHWTKLGRPKLIVAPMVDNSELPFRMLCRKYGAEAAYTPMLHSRIF 138
            R L+GESR E+AWAHWTKLGRP+ IVAPMVDNSELPFRMLCRKYGA+ AYTPMLHSRIF
Sbjct: 49  ARSLSGESRAEQAWAHWTKLGRPRFIVAPMVDNSELPFRMLCRKYGAQGAYTPMLHSRIF 108

Query: 139 TENEKYRDQEFTTCKEDRPLFVQFCANDPEILLEAARRVEPYCDYVDINLGCPQRIARRG 198
           TE EKYR++EFTTCKEDRPLFVQFCANDP++LLEAAR+VE +CDYVDINLGCPQRIA+RG
Sbjct: 109 TETEKYRNEEFTTCKEDRPLFVQFCANDPDVLLEAARKVERFCDYVDINLGCPQRIAKRG 168

Query: 199 NYGAFLMDKLPLVKSLVEKLTLNLNVPVSCKIRVFPKLEDTINYARMLEEAGCSLLAVHG 258
            YGAFLMD LPLVKSLVEKL +NL VPVSCKIR+FP LEDT+ YARMLEEAGC LLAVHG
Sbjct: 169 YYGAFLMDNLPLVKSLVEKLAVNLQVPVSCKIRLFPNLEDTLKYARMLEEAGCMLLAVHG 228

Query: 259 RTRDEKD 265
           RTRDEKD
Sbjct: 229 RTRDEKD 235


>Glyma17g18490.1 
          Length = 402

 Score =  343 bits (880), Expect = 1e-94,   Method: Compositional matrix adjust.
 Identities = 158/187 (84%), Positives = 171/187 (91%)

Query: 79  GRYLNGESRVERAWAHWTKLGRPKLIVAPMVDNSELPFRMLCRKYGAEAAYTPMLHSRIF 138
            R L+GES  ERAWAHW KLGRP+ IVAPMVDNSELPFRMLCRKYGA+ AYTPMLHSRIF
Sbjct: 49  ARSLSGESWAERAWAHWAKLGRPRFIVAPMVDNSELPFRMLCRKYGAQGAYTPMLHSRIF 108

Query: 139 TENEKYRDQEFTTCKEDRPLFVQFCANDPEILLEAARRVEPYCDYVDINLGCPQRIARRG 198
           TE EKYR++EFTTCKEDRPLFVQFCANDP++LL AAR+VEP+CDYVDINLGCPQRIA+RG
Sbjct: 109 TETEKYRNEEFTTCKEDRPLFVQFCANDPDVLLAAARKVEPFCDYVDINLGCPQRIAKRG 168

Query: 199 NYGAFLMDKLPLVKSLVEKLTLNLNVPVSCKIRVFPKLEDTINYARMLEEAGCSLLAVHG 258
            YGAFLMD LPLVKSLVEKL +NL VPVSCKIR+FP LEDT+ YARMLEEAGC LLAVHG
Sbjct: 169 YYGAFLMDNLPLVKSLVEKLAVNLQVPVSCKIRLFPNLEDTLKYARMLEEAGCMLLAVHG 228

Query: 259 RTRDEKD 265
           RTRDEKD
Sbjct: 229 RTRDEKD 235


>Glyma01g23820.1 
          Length = 348

 Score =  105 bits (263), Expect = 4e-23,   Method: Compositional matrix adjust.
 Identities = 65/177 (36%), Positives = 91/177 (51%), Gaps = 18/177 (10%)

Query: 100 RPKLIVAPMVDNSELPFRMLCRKYGAEAAY----------------TPMLHSRIFTENEK 143
           R KL++APMV    LPFR+L  +YGA+  Y                  ++ S  F E + 
Sbjct: 32  RNKLVLAPMVRVGTLPFRLLAAQYGADITYGEEIIDHKMLKCDRQINELIGSTDFVE-KG 90

Query: 144 YRDQEFTTCKEDRPLFV-QFCANDPEILLEAARRVEPYCDYVDINLGCPQRIARRGNYGA 202
            ++  F TC E++   V Q   +D    L  A+ V      VDIN+GCP+  +  G  GA
Sbjct: 91  TKNVVFRTCDEEKDTVVFQIGTSDAVRALATAQLVCNDVAAVDINMGCPKSFSVSGGMGA 150

Query: 203 FLMDKLPLVKSLVEKLTLNLNVPVSCKIRVFPKLEDTINYARMLEEAGCSLLAVHGR 259
            L+ K  L+  ++  L  NLN PV+CKIR+     DT+  AR +E+ G S LAVHGR
Sbjct: 151 ALLSKPELIHDILTTLRRNLNTPVTCKIRLLKSPHDTVELARRIEKTGVSALAVHGR 207


>Glyma01g23820.3 
          Length = 320

 Score =  105 bits (262), Expect = 5e-23,   Method: Compositional matrix adjust.
 Identities = 65/177 (36%), Positives = 91/177 (51%), Gaps = 18/177 (10%)

Query: 100 RPKLIVAPMVDNSELPFRMLCRKYGAEAAY----------------TPMLHSRIFTENEK 143
           R KL++APMV    LPFR+L  +YGA+  Y                  ++ S  F E + 
Sbjct: 4   RNKLVLAPMVRVGTLPFRLLAAQYGADITYGEEIIDHKMLKCDRQINELIGSTDFVE-KG 62

Query: 144 YRDQEFTTCKEDRPLFV-QFCANDPEILLEAARRVEPYCDYVDINLGCPQRIARRGNYGA 202
            ++  F TC E++   V Q   +D    L  A+ V      VDIN+GCP+  +  G  GA
Sbjct: 63  TKNVVFRTCDEEKDTVVFQIGTSDAVRALATAQLVCNDVAAVDINMGCPKSFSVSGGMGA 122

Query: 203 FLMDKLPLVKSLVEKLTLNLNVPVSCKIRVFPKLEDTINYARMLEEAGCSLLAVHGR 259
            L+ K  L+  ++  L  NLN PV+CKIR+     DT+  AR +E+ G S LAVHGR
Sbjct: 123 ALLSKPELIHDILTTLRRNLNTPVTCKIRLLKSPHDTVELARRIEKTGVSALAVHGR 179


>Glyma08g36840.1 
          Length = 292

 Score = 95.1 bits (235), Expect = 7e-20,   Method: Compositional matrix adjust.
 Identities = 62/170 (36%), Positives = 84/170 (49%), Gaps = 20/170 (11%)

Query: 108 MVDNSELPFRMLCRKYGAEAAY----------------TPMLHSRIFTENEKYRDQEFTT 151
           MV    LPFR+L  +YGA+  Y                  ++ S  F E +   +  F T
Sbjct: 1   MVRVGTLPFRLLAAQYGADITYCEEIIDHKMLKCERRINELIGSTDFVE-KGTNNVVFRT 59

Query: 152 CKE--DRPLFVQFCANDPEILLEAARRVEPYCDYVDINLGCPQRIARRGNYGAFLMDKLP 209
           C E  DR +F Q   +D    L  A+ V      VDIN+GCP+  +  G  GA L+ K  
Sbjct: 60  CDEEKDRVVF-QIGTSDAVRALTTAQLVCNDVAAVDINMGCPKSFSVSGGMGAALLSKPE 118

Query: 210 LVKSLVEKLTLNLNVPVSCKIRVFPKLEDTINYARMLEEAGCSLLAVHGR 259
           L+  ++  L  NLN PV+CKIR+     DT+  AR +E+ G S LAVHGR
Sbjct: 119 LIHDILTTLKRNLNTPVTCKIRLLKSPHDTVELARRIEKTGVSALAVHGR 168


>Glyma01g23820.2 
          Length = 279

 Score = 83.6 bits (205), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 46/112 (41%), Positives = 62/112 (55%), Gaps = 1/112 (0%)

Query: 149 FTTCKEDRPLFV-QFCANDPEILLEAARRVEPYCDYVDINLGCPQRIARRGNYGAFLMDK 207
           F TC E++   V Q   +D    L  A+ V      VDIN+GCP+  +  G  GA L+ K
Sbjct: 27  FRTCDEEKDTVVFQIGTSDAVRALATAQLVCNDVAAVDINMGCPKSFSVSGGMGAALLSK 86

Query: 208 LPLVKSLVEKLTLNLNVPVSCKIRVFPKLEDTINYARMLEEAGCSLLAVHGR 259
             L+  ++  L  NLN PV+CKIR+     DT+  AR +E+ G S LAVHGR
Sbjct: 87  PELIHDILTTLRRNLNTPVTCKIRLLKSPHDTVELARRIEKTGVSALAVHGR 138


>Glyma04g00940.1 
          Length = 643

 Score = 68.9 bits (167), Expect = 6e-12,   Method: Compositional matrix adjust.
 Identities = 44/169 (26%), Positives = 73/169 (43%), Gaps = 4/169 (2%)

Query: 100 RPKLIVAPMVDNSELPFRMLCRKYGAEAAYTPMLHSRIFTENEKYRDQEFTTCKEDRPLF 159
           R KL +AP+     LPFR +C+  GA+     M       + +            +    
Sbjct: 289 REKLYLAPLTTVGNLPFRRVCKVLGADVTCGEMAMCTNLLQGQASEWALLRRHSSEDLFG 348

Query: 160 VQFCANDPEILLEAARRVEPYC--DYVDINLGCPQRIARRGNYGAFLMDKLPLVKSLVEK 217
           VQ C   P+ +      +E  C  D++DIN+GCP  I      G+ L+ K   +KS+VE 
Sbjct: 349 VQICGAYPDTVARTVELIEQECTIDFIDINMGCPIDIVVNKGAGSALLTKPMRMKSIVEV 408

Query: 218 LTLNLNVPVSCKIRV--FPKLEDTINYARMLEEAGCSLLAVHGRTRDEK 264
            +     P++ K+R   F       +    +   G S + +HGR+R ++
Sbjct: 409 ASGTAEKPITIKVRTAYFEGKNRIDSLIADIGSWGASAVTIHGRSRQQR 457


>Glyma10g11570.1 
          Length = 486

 Score = 64.7 bits (156), Expect = 9e-11,   Method: Compositional matrix adjust.
 Identities = 43/144 (29%), Positives = 66/144 (45%), Gaps = 3/144 (2%)

Query: 101 PKLIVAPMVDNSELPFRMLCRKYGAEA-AYTPMLHSRIFTENEKYRDQEFTTCKEDRPLF 159
           P   VAPM+D ++  +R L R     A  YT ML +      +   D+      +  P+ 
Sbjct: 9   PLFSVAPMMDWTDHHYRTLARLISKHAWLYTEMLAAETIVYQKGNLDRFLAYSPDQHPIV 68

Query: 160 VQFCANDPEILLEAARRVEPYC-DYVDINLGCPQ-RIARRGNYGAFLMDKLPLVKSLVEK 217
           +Q   ++ + L +A      YC D ++ N GCP  R+A RG +G  LM     V   +  
Sbjct: 69  LQIGGSNLDNLAKATELANAYCYDEINFNCGCPSPRVAGRGCFGVRLMLDPKFVAEAISL 128

Query: 218 LTLNLNVPVSCKIRVFPKLEDTIN 241
           +  N NVPV+ K R+     D+ N
Sbjct: 129 IAANTNVPVTVKCRIGVDDHDSYN 152


>Glyma12g13520.1 
          Length = 32

 Score = 60.5 bits (145), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 26/31 (83%), Positives = 27/31 (87%)

Query: 93  AHWTKLGRPKLIVAPMVDNSELPFRMLCRKY 123
           AHW KLGRP+ IVA MVDNSEL FRMLCRKY
Sbjct: 1   AHWAKLGRPRFIVALMVDNSELSFRMLCRKY 31