Jatropha Genome Database

JcCB0184671.10
Show Alignment:  
BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCB0184671.10 + phase: 0 
         (52 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma19g32780.3                                                        59   1e-09
Glyma19g32780.2                                                        59   1e-09
Glyma19g32780.1                                                        59   1e-09
Glyma03g29880.2                                                        57   4e-09
Glyma03g29880.1                                                        57   4e-09

>Glyma19g32780.3 
          Length = 160

 Score = 59.3 bits (142), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 30/48 (62%), Positives = 36/48 (75%)

Query: 5   RSISTAISAGAALAVTSAVIDAGGQTTRIDNGKEYYPYTTKKRSTAES 52
           RSI TA+SAG+ALA TSA +D G QT + D GKEY  YTTKKR + E+
Sbjct: 113 RSIKTALSAGSALAFTSAFLDFGDQTIKHDTGKEYAAYTTKKRPSTEA 160


>Glyma19g32780.2 
          Length = 160

 Score = 59.3 bits (142), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 30/48 (62%), Positives = 36/48 (75%)

Query: 5   RSISTAISAGAALAVTSAVIDAGGQTTRIDNGKEYYPYTTKKRSTAES 52
           RSI TA+SAG+ALA TSA +D G QT + D GKEY  YTTKKR + E+
Sbjct: 113 RSIKTALSAGSALAFTSAFLDFGDQTIKHDTGKEYAAYTTKKRPSTEA 160


>Glyma19g32780.1 
          Length = 160

 Score = 59.3 bits (142), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 30/48 (62%), Positives = 36/48 (75%)

Query: 5   RSISTAISAGAALAVTSAVIDAGGQTTRIDNGKEYYPYTTKKRSTAES 52
           RSI TA+SAG+ALA TSA +D G QT + D GKEY  YTTKKR + E+
Sbjct: 113 RSIKTALSAGSALAFTSAFLDFGDQTIKHDTGKEYAAYTTKKRPSTEA 160


>Glyma03g29880.2 
          Length = 160

 Score = 57.0 bits (136), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 29/48 (60%), Positives = 36/48 (75%)

Query: 5   RSISTAISAGAALAVTSAVIDAGGQTTRIDNGKEYYPYTTKKRSTAES 52
           RSI TA+SAG+ALA TSA +D G QT + D GKEY  YTTKKR + ++
Sbjct: 113 RSIKTALSAGSALAFTSAFLDFGDQTLKHDAGKEYAAYTTKKRPSTDA 160


>Glyma03g29880.1 
          Length = 160

 Score = 57.0 bits (136), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 29/48 (60%), Positives = 36/48 (75%)

Query: 5   RSISTAISAGAALAVTSAVIDAGGQTTRIDNGKEYYPYTTKKRSTAES 52
           RSI TA+SAG+ALA TSA +D G QT + D GKEY  YTTKKR + ++
Sbjct: 113 RSIKTALSAGSALAFTSAFLDFGDQTLKHDAGKEYAAYTTKKRPSTDA 160