Jatropha Genome Database

JcCB0183891.10
Show Alignment:  
BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCB0183891.10 - phase: 0 /partial
         (344 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma19g42620.1                                                       497   e-140
Glyma19g42610.1                                                       493   e-139
Glyma19g42600.1                                                       480   e-136
Glyma19g42600.3                                                       480   e-136
Glyma03g40050.1                                                       479   e-135
Glyma19g42600.2                                                       402   e-112
Glyma03g40060.1                                                        90   4e-18

>Glyma19g42620.1 
          Length = 478

 Score =  497 bits (1279), Expect = e-140,   Method: Compositional matrix adjust.
 Identities = 235/332 (70%), Positives = 273/332 (82%), Gaps = 9/332 (2%)

Query: 1   MVHAPFALLPATFPESHWNLACEVAPIFNELVDRVSLDGKFLQDSLSRTKKVDVFTSRLL 60
           +VHAP AL P  FPE+HW  ACE+APIFNELVDRVSLD  FL DSLSRTKK D FTSRLL
Sbjct: 53  LVHAPVALFPTPFPENHWREACELAPIFNELVDRVSLDATFLHDSLSRTKKADEFTSRLL 112

Query: 61  DIHSKMLEINKFEDIRLGLHRSDYMLDEETKSLLQIELNTISASFPGLSCVISELHRSLL 120
           DIHS M++INK E+IRLGLHRSDYMLDE+TKSLLQ+ELNTI++SF  LS +++ELHR +L
Sbjct: 113 DIHSMMIQINKKEEIRLGLHRSDYMLDEKTKSLLQVELNTIASSFASLSNLVTELHRYIL 172

Query: 121 KHYGEHLALDSKRIPTNXXXXXXXXXXXXXWSEYNNPRAVVMVVVQPQEHNMYDQHWLCA 180
             +G+ L LDSKRIP N             WSEYNNPRAV+M+VVQ +E NMYDQH++ A
Sbjct: 173 SCHGKLLELDSKRIPANDAVNQYADALAKAWSEYNNPRAVIMIVVQAEERNMYDQHFVSA 232

Query: 181 ILKEKYPFHLYNTYNVTAIRKTLAEIDEEGELLPDGTLLVDHQAIAVAYFRAGYAPTDFP 240
                    LYNT+N+T IRKTL E+D+EGE+LPDGTL VD +AI+V YFRAGY P D+P
Sbjct: 233 ---------LYNTHNITTIRKTLTEVDQEGEILPDGTLSVDGEAISVIYFRAGYTPDDYP 283

Query: 241 SEAEWRARLLVEQSLAIKCPSISYHLAGTKKIQQELAKPNVLERFLDNKEDTAKLRKCFA 300
           SE+EWRARLL+EQS A+KCPSISYHL GTKKIQQELAKP VLERFLDNK+D AKLRKCFA
Sbjct: 284 SESEWRARLLMEQSSAVKCPSISYHLVGTKKIQQELAKPGVLERFLDNKDDIAKLRKCFA 343

Query: 301 GLWSLDESDIIKRAIERPELFVMKPQREGGGT 332
           GLWSLD+S+I+++AIERPELFVMKPQREGGG 
Sbjct: 344 GLWSLDDSNIVRKAIERPELFVMKPQREGGGN 375


>Glyma19g42610.1 
          Length = 527

 Score =  493 bits (1270), Expect = e-139,   Method: Compositional matrix adjust.
 Identities = 235/332 (70%), Positives = 272/332 (81%), Gaps = 8/332 (2%)

Query: 1   MVHAPFALLPATFPESHWNLACEVAPIFNELVDRVSLDGKFLQDSLSRTKKVDVFTSRLL 60
           +VHAP ALLP  FPE  W  A E+APIFNELVDRVSLD  FLQ+SLSRTKK D FTSRLL
Sbjct: 101 LVHAPLALLPTPFPEKQWREANELAPIFNELVDRVSLDATFLQESLSRTKKADEFTSRLL 160

Query: 61  DIHSKMLEINKFEDIRLGLHRSDYMLDEETKSLLQIELNTISASFPGLSCVISELHRSLL 120
           DIHSKML+INK E+IRLGLHRSDYMLDE+TKSLLQIELNTIS+SF GLS +++ELHR +L
Sbjct: 161 DIHSKMLQINKKEEIRLGLHRSDYMLDEKTKSLLQIELNTISSSFAGLSNLVTELHRYIL 220

Query: 121 KHYGEHLALDSKRIPTNXXXXXXXXXXXXXWSEYNNPRAVVMVVVQPQEHNMYDQHWLCA 180
             +G+ L LDSKRIP N             WSEYNNPRAV+M+VVQ +E NMYDQH++  
Sbjct: 221 SRHGKLLGLDSKRIPANNAVNQYAEALAKAWSEYNNPRAVIMIVVQAEERNMYDQHFVSD 280

Query: 181 ILKEKYPFHLYNTYNVTAIRKTLAEIDEEGELLPDGTLLVDHQAIAVAYFRAGYAPTDFP 240
           +L+EK        YN+T IRKTLAE+D EGE+LPDGTL VD QAI+V YFRAGY P D+P
Sbjct: 281 VLREK--------YNITTIRKTLAEVDHEGEILPDGTLFVDGQAISVIYFRAGYTPIDYP 332

Query: 241 SEAEWRARLLVEQSLAIKCPSISYHLAGTKKIQQELAKPNVLERFLDNKEDTAKLRKCFA 300
           SE+EW AR+L+EQS A+KCPSISYHL GTKKIQQELAKP VLERF++NKE+ AKLRKCF 
Sbjct: 333 SESEWSARILMEQSSAVKCPSISYHLVGTKKIQQELAKPGVLERFIENKEEIAKLRKCFT 392

Query: 301 GLWSLDESDIIKRAIERPELFVMKPQREGGGT 332
           GLWSLD+S+I+++AIERPELFVMKPQREGGG 
Sbjct: 393 GLWSLDDSNIVRKAIERPELFVMKPQREGGGN 424


>Glyma19g42600.1 
          Length = 547

 Score =  480 bits (1236), Expect = e-136,   Method: Compositional matrix adjust.
 Identities = 224/331 (67%), Positives = 269/331 (81%), Gaps = 8/331 (2%)

Query: 1   MVHAPFALLPATFPESHWNLACEVAPIFNELVDRVSLDGKFLQDSLSRTKKVDVFTSRLL 60
           +VH P +LLP  FPESHW   CE+APIFNELVDRVSLDGKFLQ+SLSRTK  D FTSRLL
Sbjct: 121 LVHLPLSLLPGPFPESHWKQGCELAPIFNELVDRVSLDGKFLQESLSRTKNADEFTSRLL 180

Query: 61  DIHSKMLEINKFEDIRLGLHRSDYMLDEETKSLLQIELNTISASFPGLSCVISELHRSLL 120
           DIHSKML+INK EDIR+G+ RSDYM+DE+TKSLLQIE+NTIS SF  + C+++ LH+SLL
Sbjct: 181 DIHSKMLQINKKEDIRMGIVRSDYMIDEKTKSLLQIEMNTISTSFALIGCLMTGLHKSLL 240

Query: 121 KHYGEHLALDSKRIPTNXXXXXXXXXXXXXWSEYNNPRAVVMVVVQPQEHNMYDQHWLCA 180
             YG+ L L+S R+P N             WSEYNNPRA ++VVVQ +E NMY+QH++ A
Sbjct: 241 SQYGKFLGLNSNRVPANNAVDQSAEALAKAWSEYNNPRAAILVVVQVEERNMYEQHYISA 300

Query: 181 ILKEKYPFHLYNTYNVTAIRKTLAEIDEEGELLPDGTLLVDHQAIAVAYFRAGYAPTDFP 240
           +L+EK        +++ +IRKTL EID+EG++LPDGTL VD QAI+V YFRAGY P D+P
Sbjct: 301 LLREK--------HHIRSIRKTLTEIDQEGKILPDGTLSVDGQAISVVYFRAGYTPKDYP 352

Query: 241 SEAEWRARLLVEQSLAIKCPSISYHLAGTKKIQQELAKPNVLERFLDNKEDTAKLRKCFA 300
           SE+EWRARLL+EQS AIKCP+ISYHL GTKKIQQELAKP VLERF++NK+  AKLR CFA
Sbjct: 353 SESEWRARLLMEQSSAIKCPTISYHLVGTKKIQQELAKPGVLERFVENKDHIAKLRACFA 412

Query: 301 GLWSLDESDIIKRAIERPELFVMKPQREGGG 331
           GLWSL++SDI+K+AIE PELFVMKPQREGGG
Sbjct: 413 GLWSLEDSDIVKKAIENPELFVMKPQREGGG 443


>Glyma19g42600.3 
          Length = 449

 Score =  480 bits (1236), Expect = e-136,   Method: Compositional matrix adjust.
 Identities = 224/333 (67%), Positives = 270/333 (81%), Gaps = 8/333 (2%)

Query: 1   MVHAPFALLPATFPESHWNLACEVAPIFNELVDRVSLDGKFLQDSLSRTKKVDVFTSRLL 60
           +VH P +LLP  FPESHW   CE+APIFNELVDRVSLDGKFLQ+SLSRTK  D FTSRLL
Sbjct: 121 LVHLPLSLLPGPFPESHWKQGCELAPIFNELVDRVSLDGKFLQESLSRTKNADEFTSRLL 180

Query: 61  DIHSKMLEINKFEDIRLGLHRSDYMLDEETKSLLQIELNTISASFPGLSCVISELHRSLL 120
           DIHSKML+INK EDIR+G+ RSDYM+DE+TKSLLQIE+NTIS SF  + C+++ LH+SLL
Sbjct: 181 DIHSKMLQINKKEDIRMGIVRSDYMIDEKTKSLLQIEMNTISTSFALIGCLMTGLHKSLL 240

Query: 121 KHYGEHLALDSKRIPTNXXXXXXXXXXXXXWSEYNNPRAVVMVVVQPQEHNMYDQHWLCA 180
             YG+ L L+S R+P N             WSEYNNPRA ++VVVQ +E NMY+QH++ A
Sbjct: 241 SQYGKFLGLNSNRVPANNAVDQSAEALAKAWSEYNNPRAAILVVVQVEERNMYEQHYISA 300

Query: 181 ILKEKYPFHLYNTYNVTAIRKTLAEIDEEGELLPDGTLLVDHQAIAVAYFRAGYAPTDFP 240
           +L+EK        +++ +IRKTL EID+EG++LPDGTL VD QAI+V YFRAGY P D+P
Sbjct: 301 LLREK--------HHIRSIRKTLTEIDQEGKILPDGTLSVDGQAISVVYFRAGYTPKDYP 352

Query: 241 SEAEWRARLLVEQSLAIKCPSISYHLAGTKKIQQELAKPNVLERFLDNKEDTAKLRKCFA 300
           SE+EWRARLL+EQS AIKCP+ISYHL GTKKIQQELAKP VLERF++NK+  AKLR CFA
Sbjct: 353 SESEWRARLLMEQSSAIKCPTISYHLVGTKKIQQELAKPGVLERFVENKDHIAKLRACFA 412

Query: 301 GLWSLDESDIIKRAIERPELFVMKPQREGGGTI 333
           GLWSL++SDI+K+AIE PELFVMKPQREGGG +
Sbjct: 413 GLWSLEDSDIVKKAIENPELFVMKPQREGGGLV 445


>Glyma03g40050.1 
          Length = 547

 Score =  479 bits (1233), Expect = e-135,   Method: Compositional matrix adjust.
 Identities = 225/332 (67%), Positives = 268/332 (80%), Gaps = 8/332 (2%)

Query: 1   MVHAPFALLPATFPESHWNLACEVAPIFNELVDRVSLDGKFLQDSLSRTKKVDVFTSRLL 60
           +VH P +LLP  FPE+HW  ACE+APIFNELVDRVSLDGKFLQ+SLSRTK  D FTSRLL
Sbjct: 121 LVHLPLSLLPGPFPENHWKQACELAPIFNELVDRVSLDGKFLQESLSRTKNADEFTSRLL 180

Query: 61  DIHSKMLEINKFEDIRLGLHRSDYMLDEETKSLLQIELNTISASFPGLSCVISELHRSLL 120
           DIHSKML+INK EDIR+G+ RSDYM+DE+TKSLLQIE+NTIS SF  + C+++ LH+SLL
Sbjct: 181 DIHSKMLQINKKEDIRMGIVRSDYMIDEKTKSLLQIEMNTISTSFALIGCLMTGLHKSLL 240

Query: 121 KHYGEHLALDSKRIPTNXXXXXXXXXXXXXWSEYNNPRAVVMVVVQPQEHNMYDQHWLCA 180
             YG+ L LDS R+P N             WSEYNNPRA ++VVVQ +E NMY+QH++ A
Sbjct: 241 SQYGKFLGLDSNRVPANNAVDQSAEALAKAWSEYNNPRAAILVVVQVEERNMYEQHYISA 300

Query: 181 ILKEKYPFHLYNTYNVTAIRKTLAEIDEEGELLPDGTLLVDHQAIAVAYFRAGYAPTDFP 240
           +L+EK        +++ +IRKTL EID+EGE+LPDGTL VD Q I+V YFRAGY P D+P
Sbjct: 301 LLREK--------HHIRSIRKTLTEIDQEGEILPDGTLSVDGQEISVVYFRAGYTPKDYP 352

Query: 241 SEAEWRARLLVEQSLAIKCPSISYHLAGTKKIQQELAKPNVLERFLDNKEDTAKLRKCFA 300
           SE+EWRARLL+EQS AIKCP+ISYHL GTKKIQQELAKP VLERF++NK+  AKLR CFA
Sbjct: 353 SESEWRARLLMEQSSAIKCPTISYHLVGTKKIQQELAKPGVLERFVENKDHIAKLRACFA 412

Query: 301 GLWSLDESDIIKRAIERPELFVMKPQREGGGT 332
           GLWSL++SDI K+AIE PELFVMKPQREGGG 
Sbjct: 413 GLWSLEDSDIAKKAIENPELFVMKPQREGGGN 444


>Glyma19g42600.2 
          Length = 436

 Score =  402 bits (1033), Expect = e-112,   Method: Compositional matrix adjust.
 Identities = 189/286 (66%), Positives = 228/286 (79%), Gaps = 8/286 (2%)

Query: 1   MVHAPFALLPATFPESHWNLACEVAPIFNELVDRVSLDGKFLQDSLSRTKKVDVFTSRLL 60
           +VH P +LLP  FPESHW   CE+APIFNELVDRVSLDGKFLQ+SLSRTK  D FTSRLL
Sbjct: 121 LVHLPLSLLPGPFPESHWKQGCELAPIFNELVDRVSLDGKFLQESLSRTKNADEFTSRLL 180

Query: 61  DIHSKMLEINKFEDIRLGLHRSDYMLDEETKSLLQIELNTISASFPGLSCVISELHRSLL 120
           DIHSKML+INK EDIR+G+ RSDYM+DE+TKSLLQIE+NTIS SF  + C+++ LH+SLL
Sbjct: 181 DIHSKMLQINKKEDIRMGIVRSDYMIDEKTKSLLQIEMNTISTSFALIGCLMTGLHKSLL 240

Query: 121 KHYGEHLALDSKRIPTNXXXXXXXXXXXXXWSEYNNPRAVVMVVVQPQEHNMYDQHWLCA 180
             YG+ L L+S R+P N             WSEYNNPRA ++VVVQ +E NMY+QH++ A
Sbjct: 241 SQYGKFLGLNSNRVPANNAVDQSAEALAKAWSEYNNPRAAILVVVQVEERNMYEQHYISA 300

Query: 181 ILKEKYPFHLYNTYNVTAIRKTLAEIDEEGELLPDGTLLVDHQAIAVAYFRAGYAPTDFP 240
           +L+EK        +++ +IRKTL EID+EG++LPDGTL VD QAI+V YFRAGY P D+P
Sbjct: 301 LLREK--------HHIRSIRKTLTEIDQEGKILPDGTLSVDGQAISVVYFRAGYTPKDYP 352

Query: 241 SEAEWRARLLVEQSLAIKCPSISYHLAGTKKIQQELAKPNVLERFL 286
           SE+EWRARLL+EQS AIKCP+ISYHL GTKKIQQELAKP VLER+L
Sbjct: 353 SESEWRARLLMEQSSAIKCPTISYHLVGTKKIQQELAKPGVLERYL 398


>Glyma03g40060.1 
          Length = 279

 Score = 89.7 bits (221), Expect = 4e-18,   Method: Compositional matrix adjust.
 Identities = 61/125 (48%), Positives = 73/125 (58%), Gaps = 24/125 (19%)

Query: 1   MVHAPFALLPATFPESHWNLACEVAPIFNELVDRVSLDGKFLQDSLSRTKK---VDVFTS 57
           +VHAP ALLP  FPE     A E             LD KFLQ+SLS   K   V +   
Sbjct: 47  LVHAPLALLPTPFPEKQCREATE-------------LDAKFLQESLSSLSKRLRVRIVGC 93

Query: 58  RLLDIHSKMLEINKFED--IRLGLHRSDYMLDEETKSLLQIELNTISASFPGLSCVISEL 115
           R    +   L    F D  IRLGLHRSDYMLDE+TKSLLQIELNTIS+SF GL  ++ ++
Sbjct: 94  R----YEVFLLFFTFLDDEIRLGLHRSDYMLDEKTKSLLQIELNTISSSFAGL--MVLQI 147

Query: 116 HRSLL 120
            R++L
Sbjct: 148 TRTML 152



 Score = 75.9 bits (185), Expect = 6e-14,   Method: Compositional matrix adjust.
 Identities = 40/64 (62%), Positives = 42/64 (65%)

Query: 220 VDHQAIAVAYFRAGYAPTDFPSEAEWRARLLVEQSLAIKCPSISYHLAGTKKIQQELAKP 279
           V  QA       A    T F    EWRARLL+EQS A+KCPSISYHL GTK IQQELAKP
Sbjct: 215 VPFQAPLFLLCIADMTQTSFNYMKEWRARLLMEQSSAVKCPSISYHLLGTKMIQQELAKP 274

Query: 280 NVLE 283
            VLE
Sbjct: 275 GVLE 278