Jatropha Genome Database

JcCB0183721.10
Show Alignment:  
BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCB0183721.10 - phase: 2 /partial
         (310 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma18g48380.1                                                       428   e-120
Glyma09g38000.1                                                       426   e-119

>Glyma18g48380.1 
          Length = 485

 Score =  428 bits (1101), Expect = e-120,   Method: Compositional matrix adjust.
 Identities = 213/330 (64%), Positives = 249/330 (75%), Gaps = 26/330 (7%)

Query: 1   LWSSFFTAAFSVFETYRESPPTTSEKKGSHTRNNGWTSAVKKIVAGGSMRRIHERVLGPS 60
           LWSS FT+ FSV ETY ES  + SEKK   +R++GW +AV+K+V GGSMRR  ERVLG S
Sbjct: 47  LWSSIFTSGFSVVETYSES--SASEKKAVPSRSSGWAAAVRKVVTGGSMRRFQERVLGSS 104

Query: 61  RTGISNTTSEIWLLGVCYKISQDGSNADAATS---------------------FDAIGDS 99
           RT IS++  +IWLLGVC+KISQ  S     TS                     FDAIGD+
Sbjct: 105 RTDISSSDGDIWLLGVCHKISQQESTGGVDTSNGLASFEQDFSSKILVTYRKGFDAIGDT 164

Query: 100 KFTSDVGWGCMLRSSQMLVAQALLFHQLGRSWRKPIQKPLDQKYVEILHLFGDSEASPFS 159
           K+TSDV WGCMLRSSQMLVAQALLFH+LGRSWRKPI KPLD++Y+++L LFGDSEAS FS
Sbjct: 165 KYTSDVNWGCMLRSSQMLVAQALLFHKLGRSWRKPIDKPLDKEYIDVLQLFGDSEASAFS 224

Query: 160 IHNLIHAGKAYGLAAGSWVGPYAMCRSWELLARCKREENNLEHEALPMAVYVVSGDEDGE 219
           IHNL+ AGK YGLA GSWVGPYAMCR+WE+LA   R++N+L    LPMA+YVVSGDEDGE
Sbjct: 225 IHNLLQAGKGYGLAVGSWVGPYAMCRTWEVLA---RKKNDLGEPPLPMAIYVVSGDEDGE 281

Query: 220 RGGAPVVCIEDASRHCLDFSRGQANWTPIXXXXXXXXXXEKVNLRYIPSLQATLTFPQSL 279
           RGGAPVVCIEDAS+ C +FS G A WTP+          +KVN RYIP L++T  FPQSL
Sbjct: 282 RGGAPVVCIEDASKRCSEFSSGLAVWTPLLLLVPLVLGLDKVNPRYIPLLRSTFKFPQSL 341

Query: 280 GIMGGKPGASTYIVGVQDDNAFYLDPHGVQ 309
           GIMGGKPGASTYI+GVQ++ AFYLDPH VQ
Sbjct: 342 GIMGGKPGASTYIIGVQNEKAFYLDPHDVQ 371


>Glyma09g38000.1 
          Length = 486

 Score =  426 bits (1096), Expect = e-119,   Method: Compositional matrix adjust.
 Identities = 213/330 (64%), Positives = 249/330 (75%), Gaps = 26/330 (7%)

Query: 1   LWSSFFTAAFSVFETYRESPPTTSEKKGSHTRNNGWTSAVKKIVAGGSMRRIHERVLGPS 60
           LWS+ FT+ FSV ETY ES  + SEKK  H+R++GW +AV+K+V GGSMRR  ERVLG S
Sbjct: 47  LWSNIFTSGFSVVETYSES--SASEKKAVHSRSSGWAAAVRKVVTGGSMRRFQERVLGSS 104

Query: 61  RTGISNTTSEIWLLGVCYKISQ-------DGSNADAA--------------TSFDAIGDS 99
           RT IS++  +IWLLGVC+KISQ       D SN  A+                FDAIGD+
Sbjct: 105 RTDISSSDGDIWLLGVCHKISQQESSGGVDNSNGLASFEQDFSSKILVTYRKGFDAIGDT 164

Query: 100 KFTSDVGWGCMLRSSQMLVAQALLFHQLGRSWRKPIQKPLDQKYVEILHLFGDSEASPFS 159
           K+TSDV WGCMLRSSQMLVAQALLFH+LGRSWRKPI KP D++Y+++L LFGDSEAS FS
Sbjct: 165 KYTSDVHWGCMLRSSQMLVAQALLFHKLGRSWRKPIDKPPDKEYIDVLQLFGDSEASAFS 224

Query: 160 IHNLIHAGKAYGLAAGSWVGPYAMCRSWELLARCKREENNLEHEALPMAVYVVSGDEDGE 219
           IHNL+ AGK YGLA GSWVGPYAMCR+WE+LAR K   N+L    LPMA+YVVSGDEDGE
Sbjct: 225 IHNLLQAGKGYGLAVGSWVGPYAMCRTWEVLARKK---NDLGELPLPMAIYVVSGDEDGE 281

Query: 220 RGGAPVVCIEDASRHCLDFSRGQANWTPIXXXXXXXXXXEKVNLRYIPSLQATLTFPQSL 279
           RGGAPVVCIEDAS+ C +FS G A WTP+          +KVN RYIP L++T  FPQSL
Sbjct: 282 RGGAPVVCIEDASKRCFEFSSGLAAWTPLLLLVPLVLGLDKVNPRYIPLLRSTFKFPQSL 341

Query: 280 GIMGGKPGASTYIVGVQDDNAFYLDPHGVQ 309
           GIMGGKPGASTYI+G Q++ AFYLDPH VQ
Sbjct: 342 GIMGGKPGASTYIIGAQNEKAFYLDPHDVQ 371