Jatropha Genome Database

JcCB0176661.20
Show Alignment:  
BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCB0176661.20 + phase: 0 
         (193 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma19g27510.1                                                       215   2e-56
Glyma16g05370.1                                                       213   1e-55

>Glyma19g27510.1 
          Length = 190

 Score =  215 bits (547), Expect = 2e-56,   Method: Compositional matrix adjust.
 Identities = 114/180 (63%), Positives = 127/180 (70%), Gaps = 3/180 (1%)

Query: 1   MACTIDFRCLDEGFGGKTYKRKREAQSLAATGD--VDGSMEID-GETLPPAAKRSAVASI 57
           MACTIDFRCLDEGFGGKTYKRKRE QS     D  +DG+  +D  + LPP AKRSAV S 
Sbjct: 1   MACTIDFRCLDEGFGGKTYKRKREQQSQPQHDDNAIDGASLMDTDDALPPPAKRSAVPSS 60

Query: 58  ENPDKPVFGQPTYDGVIGGKVSGRKWKQARKQRASAKLVSIKGTTFEERERQKEIKRAYR 117
           ENPDKPVFGQ +YDGVI G+VSGRKWKQ R+ RASA  VS KGTTFE+RER+K IK+AY+
Sbjct: 61  ENPDKPVFGQASYDGVIAGRVSGRKWKQVRQHRASAAQVSRKGTTFEQREREKVIKKAYK 120

Query: 118 ERMNELKDXXXXXXXXXXXXXXXXXXXXXXXXLRSGTKLQKITNPKTLKKIAKSKDRKLL 177
           ERM ELK+                        +RSGTK QKITNP TLKKIAKSK RK L
Sbjct: 121 ERMMELKEEIRLNKVEKRKKREEREKKKQENIIRSGTKFQKITNPNTLKKIAKSKQRKQL 180


>Glyma16g05370.1 
          Length = 193

 Score =  213 bits (541), Expect = 1e-55,   Method: Compositional matrix adjust.
 Identities = 115/183 (62%), Positives = 129/183 (70%), Gaps = 6/183 (3%)

Query: 1   MACTIDFRCLDEGFGGKTYKRKREAQSL----AATGDV-DGSMEID-GETLPPAAKRSAV 54
           MACTIDFRCLDEGFGGKTYKRKRE QS     AA  DV DG+  +D  + LPP AKRSA+
Sbjct: 1   MACTIDFRCLDEGFGGKTYKRKREQQSQPQHDAAADDVIDGASLMDTDDALPPPAKRSAL 60

Query: 55  ASIENPDKPVFGQPTYDGVIGGKVSGRKWKQARKQRASAKLVSIKGTTFEERERQKEIKR 114
            S ENPDKP FG P+YDGVI G+VSGRKWKQ R++RASA  VS KGTTFE+RER+K IK+
Sbjct: 61  PSSENPDKPAFGHPSYDGVIAGRVSGRKWKQVRQRRASAAQVSRKGTTFEQREREKVIKK 120

Query: 115 AYRERMNELKDXXXXXXXXXXXXXXXXXXXXXXXXLRSGTKLQKITNPKTLKKIAKSKDR 174
           AY+ERM ELK+                        +RSGTK QKITNP TLKKIAKSK R
Sbjct: 121 AYKERMMELKEEIRLNKVEKRKKKEEREKKKQENIIRSGTKFQKITNPNTLKKIAKSKQR 180

Query: 175 KLL 177
           K L
Sbjct: 181 KQL 183