Jatropha Genome Database

JcCB0176661.10
Show Alignment:  
BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCB0176661.10 + phase: 0 /partial
         (204 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma02g07300.1                                                       362   e-100
Glyma16g26300.1                                                       362   e-100
Glyma16g05380.1                                                       355   2e-98
Glyma19g27500.1                                                       344   3e-95
Glyma02g06660.1                                                        82   4e-16
Glyma05g28380.2                                                        72   4e-13
Glyma05g28380.1                                                        72   4e-13
Glyma08g11370.1                                                        70   1e-12
Glyma13g13060.1                                                        69   5e-12

>Glyma02g07300.1 
          Length = 562

 Score =  362 bits (930), Expect = e-100,   Method: Compositional matrix adjust.
 Identities = 179/204 (87%), Positives = 191/204 (93%), Gaps = 2/204 (0%)

Query: 1   VLHPQSMRPAREGDIPVRVKNSYNPNAPGTLITRARDMRKAVLTSIVLKRNVTMLDIVST 60
           VLHPQSMRPARE DIPVRVKNSYNP APGTLIT+ARDM KAVLTSIVLKRNVTMLDI ST
Sbjct: 347 VLHPQSMRPARESDIPVRVKNSYNPKAPGTLITKARDMSKAVLTSIVLKRNVTMLDIAST 406

Query: 61  RMLGQFGFLAKVFSIFEDLGISVDVVATSEVSISLTLDPSKVWSRELIQQASELDHVVEE 120
           RMLGQ+GFLAKVFSIFE+LGISVDVVATSEVS+SLTLDPSK+WSRELIQQ  ELDHVVEE
Sbjct: 407 RMLGQYGFLAKVFSIFEELGISVDVVATSEVSVSLTLDPSKLWSRELIQQ--ELDHVVEE 464

Query: 121 LEKIAVVNLLQHRSIISLIGNVQRSSLILEKVFNVLRTNGVNVQMISQGASKVNISLIVN 180
           LEKIAVVNLLQ+RSIISLIGNVQRSSLILEK F VLRT GV VQMISQGASKVNISL+VN
Sbjct: 465 LEKIAVVNLLQNRSIISLIGNVQRSSLILEKAFRVLRTLGVTVQMISQGASKVNISLVVN 524

Query: 181 DDEAEQCVRSLHKTFFETDISELD 204
           D EAEQCVR+LH  FFE+++SEL+
Sbjct: 525 DSEAEQCVRALHSAFFESELSELE 548


>Glyma16g26300.1 
          Length = 555

 Score =  362 bits (929), Expect = e-100,   Method: Compositional matrix adjust.
 Identities = 179/204 (87%), Positives = 192/204 (94%), Gaps = 2/204 (0%)

Query: 1   VLHPQSMRPAREGDIPVRVKNSYNPNAPGTLITRARDMRKAVLTSIVLKRNVTMLDIVST 60
           VLHPQSMRPARE DIPVRVKNSYNP APGTLIT+ARDM KAVLTSIVLKRNVTMLDIVST
Sbjct: 336 VLHPQSMRPARESDIPVRVKNSYNPKAPGTLITKARDMSKAVLTSIVLKRNVTMLDIVST 395

Query: 61  RMLGQFGFLAKVFSIFEDLGISVDVVATSEVSISLTLDPSKVWSRELIQQASELDHVVEE 120
           RMLGQ+GFLAKVFSIFE+LGISVDVVATSEVS+SLTLDPSK+WSRELIQQ  ELDHVVEE
Sbjct: 396 RMLGQYGFLAKVFSIFEELGISVDVVATSEVSVSLTLDPSKLWSRELIQQ--ELDHVVEE 453

Query: 121 LEKIAVVNLLQHRSIISLIGNVQRSSLILEKVFNVLRTNGVNVQMISQGASKVNISLIVN 180
           LEKIAVVNLLQ+RSIISLIGNVQRSSLILEK F VLRT G+ VQMISQGASKVNISL+VN
Sbjct: 454 LEKIAVVNLLQNRSIISLIGNVQRSSLILEKAFRVLRTLGITVQMISQGASKVNISLVVN 513

Query: 181 DDEAEQCVRSLHKTFFETDISELD 204
           D EAEQCVR+LH  FFE+++SEL+
Sbjct: 514 DSEAEQCVRALHLAFFESELSELE 537


>Glyma16g05380.1 
          Length = 562

 Score =  355 bits (911), Expect = 2e-98,   Method: Compositional matrix adjust.
 Identities = 177/204 (86%), Positives = 190/204 (93%), Gaps = 2/204 (0%)

Query: 1   VLHPQSMRPAREGDIPVRVKNSYNPNAPGTLITRARDMRKAVLTSIVLKRNVTMLDIVST 60
           VLHPQSMRPARE DIPVRVKNSYNP APGTLI + RDM KA+LTSIVLKRNVTMLDIVST
Sbjct: 347 VLHPQSMRPARESDIPVRVKNSYNPKAPGTLIAKTRDMSKALLTSIVLKRNVTMLDIVST 406

Query: 61  RMLGQFGFLAKVFSIFEDLGISVDVVATSEVSISLTLDPSKVWSRELIQQASELDHVVEE 120
           RMLGQFGFLAKVFSIFE+LGISVDVVATSEVSISLTLDPSK+WSRELIQQ  ELD+VVEE
Sbjct: 407 RMLGQFGFLAKVFSIFEELGISVDVVATSEVSISLTLDPSKLWSRELIQQ--ELDYVVEE 464

Query: 121 LEKIAVVNLLQHRSIISLIGNVQRSSLILEKVFNVLRTNGVNVQMISQGASKVNISLIVN 180
           LEKIAVVNLL+ RSIISLIGNVQRSSLILEK F+VLRT GV VQMISQGASKVNISL+VN
Sbjct: 465 LEKIAVVNLLKTRSIISLIGNVQRSSLILEKAFHVLRTLGVTVQMISQGASKVNISLVVN 524

Query: 181 DDEAEQCVRSLHKTFFETDISELD 204
           D EAEQCVR+LHK FFE+++ EL+
Sbjct: 525 DSEAEQCVRALHKAFFESELFELE 548


>Glyma19g27500.1 
          Length = 562

 Score =  344 bits (883), Expect = 3e-95,   Method: Compositional matrix adjust.
 Identities = 170/196 (86%), Positives = 183/196 (93%), Gaps = 2/196 (1%)

Query: 1   VLHPQSMRPAREGDIPVRVKNSYNPNAPGTLITRARDMRKAVLTSIVLKRNVTMLDIVST 60
           VLHPQSMRPARE DIPVRVKNSYNP APGTLI + RDM KA+LTSIVLKRNVTMLDIVST
Sbjct: 347 VLHPQSMRPARESDIPVRVKNSYNPKAPGTLIAKTRDMSKALLTSIVLKRNVTMLDIVST 406

Query: 61  RMLGQFGFLAKVFSIFEDLGISVDVVATSEVSISLTLDPSKVWSRELIQQASELDHVVEE 120
           RMLGQFGFLAKVFSIFE+LGISVDVVATSEVSISLTLDPSK+WSRELIQQ  ELD+VVEE
Sbjct: 407 RMLGQFGFLAKVFSIFEELGISVDVVATSEVSISLTLDPSKLWSRELIQQ--ELDYVVEE 464

Query: 121 LEKIAVVNLLQHRSIISLIGNVQRSSLILEKVFNVLRTNGVNVQMISQGASKVNISLIVN 180
           LEKIAVVNLL+ RSIISLIGNVQ+SSLILEK F+VLRT G+ VQMISQGASKVNISL++N
Sbjct: 465 LEKIAVVNLLKTRSIISLIGNVQKSSLILEKAFHVLRTLGITVQMISQGASKVNISLVIN 524

Query: 181 DDEAEQCVRSLHKTFF 196
           D EA+QCVR+LHK FF
Sbjct: 525 DSEADQCVRALHKAFF 540


>Glyma02g06660.1 
          Length = 115

 Score = 82.0 bits (201), Expect = 4e-16,   Method: Compositional matrix adjust.
 Identities = 50/95 (52%), Positives = 58/95 (61%), Gaps = 27/95 (28%)

Query: 2   LHPQSMRPAREGDIPVRVKNSYNPNAPGTLITRARDMRKAVLTSIVLKRNVTMLDIVSTR 61
           +H  S+ PA E DIPV  KNSYNP        + RDM KA                  TR
Sbjct: 41  MHILSISPASESDIPV--KNSYNP--------KIRDMGKAF-----------------TR 73

Query: 62  MLGQFGFLAKVFSIFEDLGISVDVVATSEVSISLT 96
           +LGQFGFLAKVFSIFEDL + V+VVATSEVSIS++
Sbjct: 74  ILGQFGFLAKVFSIFEDLDVLVNVVATSEVSISIS 108


>Glyma05g28380.2 
          Length = 715

 Score = 72.0 bits (175), Expect = 4e-13,   Method: Compositional matrix adjust.
 Identities = 54/216 (25%), Positives = 107/216 (49%), Gaps = 32/216 (14%)

Query: 1   VLHPQSMRPAREGDIPVRVKNSYNPNAPGTLITRA-------RDMRKAVLTSIVLKRNVT 53
           VLHP+++ P     IP+ ++N +N +APGT I          R   +  +       N+ 
Sbjct: 225 VLHPRTIIPVMRYGIPIMIRNIFNLSAPGTKICHPSVNDHEDRQNLQNFVKGFATIDNLA 284

Query: 54  MLDIVSTRMLGQFGFLAKVFSIFEDLGISVDVV--ATSEVSISLTLDPSKVWSRELIQQA 111
           ++++  T M G  G  + +F   +D+G +V ++  A+SE S+   + P K          
Sbjct: 285 LVNVEGTGMAGVPGTASAIFGAVKDVGANVIMISQASSEHSVCFAV-PEK---------- 333

Query: 112 SELDHVVEELE----------KIAVVNLLQHRSIISLIGNVQRSSL-ILEKVFNVLRTNG 160
            E+  V E L+          +++ V ++ + SI++ +G    S+  +   +FN L    
Sbjct: 334 -EVKAVAEALQSRFRQALDNGRLSQVAVIPNCSILAAVGQKMASTPGVSASLFNALAKAN 392

Query: 161 VNVQMISQGASKVNISLIVNDDEAEQCVRSLHKTFF 196
           +NV+ I+QG S+ NI+++V  ++  + +R++H  F+
Sbjct: 393 INVRAIAQGCSEYNITVVVKREDCIKALRAVHSRFY 428


>Glyma05g28380.1 
          Length = 916

 Score = 72.0 bits (175), Expect = 4e-13,   Method: Compositional matrix adjust.
 Identities = 54/216 (25%), Positives = 107/216 (49%), Gaps = 32/216 (14%)

Query: 1   VLHPQSMRPAREGDIPVRVKNSYNPNAPGTLITRA-------RDMRKAVLTSIVLKRNVT 53
           VLHP+++ P     IP+ ++N +N +APGT I          R   +  +       N+ 
Sbjct: 349 VLHPRTIIPVMRYGIPIMIRNIFNLSAPGTKICHPSVNDHEDRQNLQNFVKGFATIDNLA 408

Query: 54  MLDIVSTRMLGQFGFLAKVFSIFEDLGISVDVV--ATSEVSISLTLDPSKVWSRELIQQA 111
           ++++  T M G  G  + +F   +D+G +V ++  A+SE S+   + P K          
Sbjct: 409 LVNVEGTGMAGVPGTASAIFGAVKDVGANVIMISQASSEHSVCFAV-PEK---------- 457

Query: 112 SELDHVVEELE----------KIAVVNLLQHRSIISLIGNVQRSSL-ILEKVFNVLRTNG 160
            E+  V E L+          +++ V ++ + SI++ +G    S+  +   +FN L    
Sbjct: 458 -EVKAVAEALQSRFRQALDNGRLSQVAVIPNCSILAAVGQKMASTPGVSASLFNALAKAN 516

Query: 161 VNVQMISQGASKVNISLIVNDDEAEQCVRSLHKTFF 196
           +NV+ I+QG S+ NI+++V  ++  + +R++H  F+
Sbjct: 517 INVRAIAQGCSEYNITVVVKREDCIKALRAVHSRFY 552


>Glyma08g11370.1 
          Length = 916

 Score = 70.1 bits (170), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 54/217 (24%), Positives = 111/217 (51%), Gaps = 34/217 (15%)

Query: 1   VLHPQSMRPAREGDIPVRVKNSYNPNAPGTLITR--------ARDMRKAVLTSIVLKRNV 52
           VLHP+++ P     IP+ ++N +N +APGT I          +++++  V     +  N+
Sbjct: 349 VLHPRTIIPVMRYGIPIMIRNIFNLSAPGTKICHPSVNDHEDSQNLQNFVKGFATID-NL 407

Query: 53  TMLDIVSTRMLGQFGFLAKVFSIFEDLGISVDVV--ATSEVSISLTLDPSKVWSRELIQQ 110
            ++++  T M G  G  + +F   +D+G +V ++  A+SE S+   + P K         
Sbjct: 408 ALVNVEGTGMAGVPGTASAIFGAVKDVGANVIMISQASSEHSVCFAV-PEK--------- 457

Query: 111 ASELDHVVEELE----------KIAVVNLLQHRSIISLIGNVQRSSL-ILEKVFNVLRTN 159
             E+  V E L+          +++ V ++ + SI++ +G    S+  +   +FN L   
Sbjct: 458 --EVKAVAEALQSRFRQALDNGRLSQVAVIPNCSILAAVGQKMASTPGVSASLFNALAKA 515

Query: 160 GVNVQMISQGASKVNISLIVNDDEAEQCVRSLHKTFF 196
            +NV+ I+QG S+ NI+++V  ++  + +R++H  F+
Sbjct: 516 NINVRAIAQGCSEYNITVVVKREDCIKALRAVHSRFY 552


>Glyma13g13060.1 
          Length = 104

 Score = 68.6 bits (166), Expect = 5e-12,   Method: Compositional matrix adjust.
 Identities = 48/93 (51%), Positives = 57/93 (61%), Gaps = 20/93 (21%)

Query: 79  LGISVDVVATSEVSISLTLDPSK---------------VWSRELIQQAS----ELDHVVE 119
           LGISV VVATSEV++ L     K               +W    +  ++    ELDHVVE
Sbjct: 1   LGISVYVVATSEVNVFLDTVSIKAMEQRANSIGKLIIFLWCFNFLSSSANDGYELDHVVE 60

Query: 120 ELEKIAVVNLLQHRSIISLIGNVQRSSLILEKV 152
            LEKI +VN+L + SIISLIGNVQRSSLILEKV
Sbjct: 61  -LEKITLVNILHNGSIISLIGNVQRSSLILEKV 92