Jatropha Genome Database

JcCB0176391.10
Show Alignment:  
BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCB0176391.10 - phase: 0 /partial
         (348 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma17g09090.2                                                       573   e-164
Glyma17g09090.1                                                       573   e-164

>Glyma17g09090.2 
          Length = 376

 Score =  573 bits (1477), Expect = e-164,   Method: Compositional matrix adjust.
 Identities = 269/344 (78%), Positives = 301/344 (87%), Gaps = 3/344 (0%)

Query: 1   ERPDNWRDNAVHAQHVFAKVATAISKFEPVTVCASASQWEKARSLLPEHIRVVEMSMNDS 60
           ER DNWRD AVHAQ VFA+VA+AIS+FE VTVC S++QWE ARS LPEHIRVVEM+MNDS
Sbjct: 32  ERADNWRDGAVHAQRVFARVASAISRFESVTVCVSSAQWENARSQLPEHIRVVEMNMNDS 91

Query: 61  WFRDTGPTFVVNASNSSSPG---QKVAGIDWKFNSWGGVDDGCYQDWSLDLLVARKILQI 117
           WFRD GPTFVV  S +   G    ++AGIDW FNSWGG++DGCY DWSLDLLVA+KIL I
Sbjct: 92  WFRDIGPTFVVRRSTTPESGDAVSRIAGIDWNFNSWGGLEDGCYCDWSLDLLVAKKILGI 151

Query: 118 EKLPRFPHFMILEGGSIHVDGEGTCLTTEECLLNKNRNPHLTKEQIENQLKEYLGVQKVI 177
           EK+PRF H M+LEGGSIHVDGEGTCLTTEECLLNKNRNPHL+K QIE++LK YLG++KVI
Sbjct: 152 EKIPRFSHSMVLEGGSIHVDGEGTCLTTEECLLNKNRNPHLSKNQIEDELKTYLGIRKVI 211

Query: 178 WLPRGLYGDDDTNGHIDNMCCFVRPGVVLLSWVDDKKDPQFARSTEALFVLSNTTDAKGR 237
           WLPRGLYGDDDTNGHIDNMCCFVRPGVV+LSW+DD+ DPQ+ RS EA  +LSN TDA GR
Sbjct: 212 WLPRGLYGDDDTNGHIDNMCCFVRPGVVMLSWIDDETDPQYERSVEAYSLLSNETDANGR 271

Query: 238 KLQIIKIHVPGPLYMTDEEAAGVIQDGEAKPRLPGTRLAASYVNFYIANGGIITPQFGDQ 297
           K +IIK+HVP PLYMT++EAAGV  D EAKPRLPGTRLAASYVNFYIAN  II PQFGD+
Sbjct: 272 KFEIIKLHVPSPLYMTEDEAAGVSLDNEAKPRLPGTRLAASYVNFYIANKAIIAPQFGDK 331

Query: 298 ERDDEAVRVLSQAFPNHEVVRIEGAREIVLGGGNIHCITQQQPA 341
           + DDEAVRVLS+AFP+HEVV IEGAREIVL GGNIHCITQQQPA
Sbjct: 332 KWDDEAVRVLSKAFPHHEVVGIEGAREIVLAGGNIHCITQQQPA 375


>Glyma17g09090.1 
          Length = 376

 Score =  573 bits (1477), Expect = e-164,   Method: Compositional matrix adjust.
 Identities = 269/344 (78%), Positives = 301/344 (87%), Gaps = 3/344 (0%)

Query: 1   ERPDNWRDNAVHAQHVFAKVATAISKFEPVTVCASASQWEKARSLLPEHIRVVEMSMNDS 60
           ER DNWRD AVHAQ VFA+VA+AIS+FE VTVC S++QWE ARS LPEHIRVVEM+MNDS
Sbjct: 32  ERADNWRDGAVHAQRVFARVASAISRFESVTVCVSSAQWENARSQLPEHIRVVEMNMNDS 91

Query: 61  WFRDTGPTFVVNASNSSSPG---QKVAGIDWKFNSWGGVDDGCYQDWSLDLLVARKILQI 117
           WFRD GPTFVV  S +   G    ++AGIDW FNSWGG++DGCY DWSLDLLVA+KIL I
Sbjct: 92  WFRDIGPTFVVRRSTTPESGDAVSRIAGIDWNFNSWGGLEDGCYCDWSLDLLVAKKILGI 151

Query: 118 EKLPRFPHFMILEGGSIHVDGEGTCLTTEECLLNKNRNPHLTKEQIENQLKEYLGVQKVI 177
           EK+PRF H M+LEGGSIHVDGEGTCLTTEECLLNKNRNPHL+K QIE++LK YLG++KVI
Sbjct: 152 EKIPRFSHSMVLEGGSIHVDGEGTCLTTEECLLNKNRNPHLSKNQIEDELKTYLGIRKVI 211

Query: 178 WLPRGLYGDDDTNGHIDNMCCFVRPGVVLLSWVDDKKDPQFARSTEALFVLSNTTDAKGR 237
           WLPRGLYGDDDTNGHIDNMCCFVRPGVV+LSW+DD+ DPQ+ RS EA  +LSN TDA GR
Sbjct: 212 WLPRGLYGDDDTNGHIDNMCCFVRPGVVMLSWIDDETDPQYERSVEAYSLLSNETDANGR 271

Query: 238 KLQIIKIHVPGPLYMTDEEAAGVIQDGEAKPRLPGTRLAASYVNFYIANGGIITPQFGDQ 297
           K +IIK+HVP PLYMT++EAAGV  D EAKPRLPGTRLAASYVNFYIAN  II PQFGD+
Sbjct: 272 KFEIIKLHVPSPLYMTEDEAAGVSLDNEAKPRLPGTRLAASYVNFYIANKAIIAPQFGDK 331

Query: 298 ERDDEAVRVLSQAFPNHEVVRIEGAREIVLGGGNIHCITQQQPA 341
           + DDEAVRVLS+AFP+HEVV IEGAREIVL GGNIHCITQQQPA
Sbjct: 332 KWDDEAVRVLSKAFPHHEVVGIEGAREIVLAGGNIHCITQQQPA 375