Jatropha Genome Database

JcCB0174101.20
Show Alignment:  
BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCB0174101.20 + phase: 0 /partial
         (226 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma14g08290.1                                                       202   2e-52
Glyma11g07030.1                                                       202   2e-52
Glyma17g36760.1                                                       202   2e-52
Glyma16g25560.1                                                       197   5e-51
Glyma02g06520.1                                                       194   6e-50
Glyma01g38350.1                                                       194   9e-50
Glyma18g06480.1                                                       100   2e-21
Glyma15g05780.1                                                        98   8e-21

>Glyma14g08290.1 
          Length = 506

 Score =  202 bits (514), Expect = 2e-52,   Method: Compositional matrix adjust.
 Identities = 102/189 (53%), Positives = 136/189 (71%), Gaps = 2/189 (1%)

Query: 34  QTLKMNAGAFYLPKDDKERPQGEDAHFICKEKLTIGVADGVGGWARKGVDAGIYARRLME 93
           +TLK+ +G+ YLP  DKE   GEDAHFIC E+  IGVADGVGGWA  GV+AG Y+R LM 
Sbjct: 256 KTLKLISGSCYLPHPDKEETGGEDAHFICSEEQAIGVADGVGGWADLGVNAGYYSRELMS 315

Query: 94  NSIIALQGEKKGSVNPRKVLQEAYSNTNVKGSSTACIITIDSNNCLHYVNLGDSGFLLFR 153
            S+ A+Q E KGSV+P +VL++A+S+T  +GSSTACII + ++  L+ +NLGDSGF++ R
Sbjct: 316 KSVEAIQEEPKGSVDPARVLEKAHSSTKARGSSTACIIAL-TDQGLNAINLGDSGFMVVR 374

Query: 154 ENKYIYKSKVQQHEFNHPYQLGTCSD-DLPCLAYEEKILVEAGDIVVAGTDGLLDNIYPS 212
           +   I++S VQQH+FN  YQL   S+ DLP       I V  GD++VAGTDGL DN+Y +
Sbjct: 375 DGCTIFRSPVQQHDFNFTYQLECGSNGDLPSSGQVFTIPVAPGDVIVAGTDGLFDNLYNN 434

Query: 213 EITKILEKA 221
           EIT ++  A
Sbjct: 435 EITAVVVHA 443


>Glyma11g07030.1 
          Length = 372

 Score =  202 bits (514), Expect = 2e-52,   Method: Compositional matrix adjust.
 Identities = 101/189 (53%), Positives = 137/189 (72%), Gaps = 2/189 (1%)

Query: 34  QTLKMNAGAFYLPKDDKERPQGEDAHFICKEKLTIGVADGVGGWARKGVDAGIYARRLME 93
           + LKM +G+ YLP  DKE   GEDAHFIC ++  IGVADGVGGWA  GV+AG++A+ L+ 
Sbjct: 122 KPLKMLSGSCYLPHPDKEETGGEDAHFICTDEQAIGVADGVGGWADVGVNAGLFAQELIS 181

Query: 94  NSIIALQGEKKGSVNPRKVLQEAYSNTNVKGSSTACIITIDSNNCLHYVNLGDSGFLLFR 153
           N + A+Q E KGS N  +VL+EA++NT VKGSSTACI+ + ++  LH +NLGDSGF++ R
Sbjct: 182 NLVRAIQKEPKGSFNLTRVLREAHANTKVKGSSTACIVAL-TDKGLHAINLGDSGFIVVR 240

Query: 154 ENKYIYKSKVQQHEFNHPYQLGTCSD-DLPCLAYEEKILVEAGDIVVAGTDGLLDNIYPS 212
           +   I++S  QQH+FN PYQL + +  DLP       I V +GD+V++GTDGL DN+Y S
Sbjct: 241 DGCTIFESPSQQHDFNFPYQLESGNGADLPSSGEVFTIPVASGDVVISGTDGLFDNLYNS 300

Query: 213 EITKILEKA 221
           EIT ++E A
Sbjct: 301 EITGVVEHA 309


>Glyma17g36760.1 
          Length = 506

 Score =  202 bits (514), Expect = 2e-52,   Method: Compositional matrix adjust.
 Identities = 101/189 (53%), Positives = 136/189 (71%), Gaps = 2/189 (1%)

Query: 34  QTLKMNAGAFYLPKDDKERPQGEDAHFICKEKLTIGVADGVGGWARKGVDAGIYARRLME 93
           +TLK+ +G+ YLP  DKE   GEDAHFIC E+  IGVADGVGGWA  GV+AG Y+R LM 
Sbjct: 256 KTLKLISGSCYLPHPDKEETGGEDAHFICSEEQAIGVADGVGGWADLGVNAGYYSRELMS 315

Query: 94  NSIIALQGEKKGSVNPRKVLQEAYSNTNVKGSSTACIITIDSNNCLHYVNLGDSGFLLFR 153
            S+ A+Q E KGS++P +VL++A+S+T  +GSSTACII + ++  L+ +NLGDSGF++ R
Sbjct: 316 KSVEAIQDEPKGSIDPARVLEKAHSSTKARGSSTACIIAL-TDQGLNAINLGDSGFMVVR 374

Query: 154 ENKYIYKSKVQQHEFNHPYQLGTCSD-DLPCLAYEEKILVEAGDIVVAGTDGLLDNIYPS 212
           +   I++S VQQH+FN  YQL   S+ DLP       I V  GD++VAGTDGL DN+Y +
Sbjct: 375 DGCTIFRSPVQQHDFNFTYQLECGSNGDLPSSGQVFTIPVAPGDVIVAGTDGLFDNLYNN 434

Query: 213 EITKILEKA 221
           EIT ++  A
Sbjct: 435 EITAVVVHA 443


>Glyma16g25560.1 
          Length = 362

 Score =  197 bits (502), Expect = 5e-51,   Method: Compositional matrix adjust.
 Identities = 99/186 (53%), Positives = 134/186 (72%), Gaps = 2/186 (1%)

Query: 34  QTLKMNAGAFYLPKDDKERPQGEDAHFICKEKLTIGVADGVGGWARKGVDAGIYARRLME 93
           + LK+ +G+ YLP  DKE   GEDAHFIC ++  IGVADGVGGWA  GV+AG++AR LM 
Sbjct: 107 ERLKLFSGSCYLPHPDKEDTGGEDAHFICTDEQAIGVADGVGGWADVGVNAGLFARELMS 166

Query: 94  NSIIALQGEKKGSVNPRKVLQEAYSNTNVKGSSTACIITIDSNNCLHYVNLGDSGFLLFR 153
           +S+ A++ E K S+NP +VL++A+S T  KGSSTACIIT+ ++  LH +NLGDSGF++ R
Sbjct: 167 HSVRAIEEEPKNSINPARVLEKAHSCTKAKGSSTACIITL-TDTGLHAINLGDSGFIVVR 225

Query: 154 ENKYIYKSKVQQHEFNHPYQLGTCS-DDLPCLAYEEKILVEAGDIVVAGTDGLLDNIYPS 212
           +   I++S VQQH FN  YQL + +  DLP       I V  GD+VVAGTDGL DN+Y  
Sbjct: 226 DGCTIFRSPVQQHGFNFTYQLESGNGGDLPSSGEVFTIPVAPGDVVVAGTDGLFDNLYND 285

Query: 213 EITKIL 218
           E+T+++
Sbjct: 286 EVTEVV 291


>Glyma02g06520.1 
          Length = 364

 Score =  194 bits (493), Expect = 6e-50,   Method: Compositional matrix adjust.
 Identities = 99/189 (52%), Positives = 133/189 (70%), Gaps = 2/189 (1%)

Query: 34  QTLKMNAGAFYLPKDDKERPQGEDAHFICKEKLTIGVADGVGGWARKGVDAGIYARRLME 93
           + LK+ +G+ YLP  DKE   GEDAHFIC ++  IGVADGVGGWA  GV+AG++A+ LM 
Sbjct: 109 ERLKLFSGSCYLPHPDKEDTGGEDAHFICTDEQAIGVADGVGGWADVGVNAGLFAQELMS 168

Query: 94  NSIIALQGEKKGSVNPRKVLQEAYSNTNVKGSSTACIITIDSNNCLHYVNLGDSGFLLFR 153
           +S+ A+Q E K S+NP +VL++A+S T  KGSSTACII + +N  LH +NLGDSGF++ R
Sbjct: 169 HSVRAIQEEPKDSINPARVLEKAHSCTKAKGSSTACIIAL-TNMGLHAINLGDSGFIVVR 227

Query: 154 ENKYIYKSKVQQHEFNHPYQLGTCS-DDLPCLAYEEKILVEAGDIVVAGTDGLLDNIYPS 212
           +   I++S VQQH+FN  YQL + +  DLP       I V  GD+VV GTDGL DN+Y  
Sbjct: 228 DGCTIFRSPVQQHDFNFTYQLESGNGGDLPSSGEVFTIPVAPGDVVVVGTDGLFDNLYNE 287

Query: 213 EITKILEKA 221
           E+ +I+  A
Sbjct: 288 EVAEIVLDA 296


>Glyma01g38350.1 
          Length = 408

 Score =  194 bits (492), Expect = 9e-50,   Method: Compositional matrix adjust.
 Identities = 103/208 (49%), Positives = 134/208 (64%), Gaps = 20/208 (9%)

Query: 34  QTLKMNAGAFYLPKDDKERPQGEDAHFICKEKLTIGVADGVGGWARKGVDAGIYARRLME 93
           Q LKM +G+ YLP  DKE   GEDAHFIC ++  IGVADGVGGWA  GV+AG++A  L+ 
Sbjct: 146 QPLKMLSGSCYLPHPDKEDTGGEDAHFICTDEQAIGVADGVGGWADVGVNAGLFAPELIS 205

Query: 94  NSIIALQGEKKGSVNPRKVLQEAYSNTNVKGSSTACII-------------------TID 134
           NS+ A+Q E KGS NP +VL++A++NT VKGSSTACI+                    I 
Sbjct: 206 NSVRAIQKEPKGSFNPTRVLEKAHANTKVKGSSTACILLLKRLRHYNYYHIEHVFHQAIL 265

Query: 135 SNNCLHYVNLGDSGFLLFRENKYIYKSKVQQHEFNHPYQLGTCSD-DLPCLAYEEKILVE 193
            +  LH +NL DSGF++ R+   I++  VQQH+FN PYQL + +  DLP       I V 
Sbjct: 266 KSKGLHAINLSDSGFIVVRDGLTIFEFPVQQHDFNFPYQLESGNGADLPSSGEVFTIPVA 325

Query: 194 AGDIVVAGTDGLLDNIYPSEITKILEKA 221
           +GD V+AGTDGL DN+Y SEIT ++  A
Sbjct: 326 SGDAVIAGTDGLFDNLYNSEITGVVVHA 353


>Glyma18g06480.1 
          Length = 323

 Score = 99.8 bits (247), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 57/187 (30%), Positives = 95/187 (50%), Gaps = 12/187 (6%)

Query: 41  GAFYLPKDDKERPQGEDAHFICK-EKLTIGVADGVGGWARKGVDAGIYARRLMENSIIAL 99
           G   +P   K    GEDA F+       I VADGV GWA + VD  ++ R L+ N+   +
Sbjct: 74  GTCLIPHPKKVNTGGEDAFFVSNYNGGVIAVADGVSGWAEEDVDPSLFPRELLANASNFV 133

Query: 100 QGEKKGSVNPRKVLQEAYSNTNVKGSSTACIITIDSNNCLHYVNLGDSGFLLFRENKYIY 159
             E++ + +P+ ++++A++ T   GS+T  +  ++ N  L   N+GD G  L R    ++
Sbjct: 134 GDEEEVNYDPQILIRKAHAATFSTGSATVIVAMLEKNGTLKIANVGDCGLRLIRNGHVVF 193

Query: 160 KSKVQQHEFNHPYQLG------TCSDDLPCLAYEEKILVEAGDIVVAGTDGLLDNIYPSE 213
            +  Q+H F+ P+QL       T  D   C      + +  GD +V G+DGL DN++  E
Sbjct: 194 STSPQEHYFDCPFQLSSERVGQTYLDAAVC-----NVELIQGDTIVMGSDGLFDNVFDHE 248

Query: 214 ITKILEK 220
           I   + +
Sbjct: 249 IVPTIVR 255


>Glyma15g05780.1 
          Length = 805

 Score = 97.8 bits (242), Expect = 8e-21,   Method: Composition-based stats.
 Identities = 58/167 (34%), Positives = 88/167 (52%), Gaps = 4/167 (2%)

Query: 56  EDAHFICKEKLTIGVADGVGGWARKGVDAGIYARRLMEN-SIIALQGEKKGSVNPRKVLQ 114
           EDA+FI  +   + VADGVG W+ +G +AG+Y R L+E    I    E   ++ P +V+ 
Sbjct: 581 EDAYFISHQNW-LAVADGVGQWSLEGSNAGLYIRELIEKCENIVSNYENNSTIEPAEVIT 639

Query: 115 EAYSNTNVKGSSTACIITIDSNNCLHYVNLGDSGFLLFRENKYIYKSKVQQHEFNHPYQL 174
              + T   GS +  +   D    LH  N+G++GF++ R+     KS    HEFN P Q+
Sbjct: 640 RGAAETQSPGSCSILVTNFDGQ-VLHAANVGNTGFIIIRDGSIFKKSTPMFHEFNFPLQI 698

Query: 175 GTCSDDLPCLAYEEKILVEAGDIVVAGTDGLLDNIYPSEITKILEKA 221
               DD   L     + +  GD++V  T+GL DN+Y  EI  I+ K+
Sbjct: 699 -VKGDDPSELIEGYTMDLHDGDVIVTATNGLFDNLYEQEIASIISKS 744