Jatropha Genome Database
- JcCB0174101.10
BLASTP 2.2.23 [Feb-03-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= JcCB0174101.10 - phase: 0
(131 letters)
Database: Glyma1.pep
75,778 sequences; 25,431,882 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Glyma05g30180.1 84 4e-17
Glyma08g13340.1 83 9e-17
Glyma15g00510.2 60 4e-10
Glyma13g44820.1 60 5e-10
Glyma15g00510.1 60 6e-10
Glyma20g35260.2 55 1e-08
Glyma20g35260.1 55 2e-08
Glyma10g32350.1 55 2e-08
Glyma01g45290.4 55 2e-08
Glyma01g45290.2 55 2e-08
Glyma01g45290.3 55 2e-08
Glyma01g45290.1 55 2e-08
Glyma11g00440.1 55 2e-08
Glyma19g34430.2 53 1e-07
Glyma19g34430.1 52 1e-07
Glyma03g31600.1 52 1e-07
Glyma15g00760.1 51 3e-07
Glyma02g13080.1 50 5e-07
>Glyma05g30180.1
Length = 451
Score = 84.0 bits (206), Expect = 4e-17, Method: Composition-based stats.
Identities = 43/82 (52%), Positives = 51/82 (62%), Gaps = 4/82 (4%)
Query: 47 IDGSGNTNNNSLIX----XXXXXXXXXXXXXXRLWMRFDKFGNSELMECDKSTIIKRVAI 102
I S + NNN LI RLWMRFD+ G SEL+E +K+ II+ AI
Sbjct: 38 IATSPDDNNNRLIAAGAGSSALTKAKKKTGGARLWMRFDRSGRSELVELEKNAIIRHAAI 97
Query: 103 PARDLRILGPVFSHSSNILGKD 124
PARDLRILGPVFSHSSNIL ++
Sbjct: 98 PARDLRILGPVFSHSSNILARE 119
>Glyma08g13340.1
Length = 450
Score = 82.8 bits (203), Expect = 9e-17, Method: Composition-based stats.
Identities = 35/50 (70%), Positives = 43/50 (86%)
Query: 75 RLWMRFDKFGNSELMECDKSTIIKRVAIPARDLRILGPVFSHSSNILGKD 124
RLWMRFD+ G SEL+E +K+ I++ AIPARDLRILGPVFSHSSNIL ++
Sbjct: 69 RLWMRFDRSGRSELVELEKNAIVRHAAIPARDLRILGPVFSHSSNILARE 118
>Glyma15g00510.2
Length = 368
Score = 60.5 bits (145), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 25/50 (50%), Positives = 37/50 (74%)
Query: 75 RLWMRFDKFGNSELMECDKSTIIKRVAIPARDLRILGPVFSHSSNILGKD 124
R W+R D GNS+ +E DK T+++R +PARDLR+L P+F + S ILG++
Sbjct: 50 RSWIRVDTSGNSQAIEVDKFTMMRRCDLPARDLRLLDPLFVYPSTILGRE 99
>Glyma13g44820.1
Length = 443
Score = 60.5 bits (145), Expect = 5e-10, Method: Composition-based stats.
Identities = 25/50 (50%), Positives = 37/50 (74%)
Query: 75 RLWMRFDKFGNSELMECDKSTIIKRVAIPARDLRILGPVFSHSSNILGKD 124
R W+R D GNS+ +E DK T+++R +PARDLR+L P+F + S ILG++
Sbjct: 50 RSWIRVDTSGNSQAIEVDKFTMMRRCDLPARDLRLLDPLFVYPSTILGRE 99
>Glyma15g00510.1
Length = 443
Score = 60.1 bits (144), Expect = 6e-10, Method: Composition-based stats.
Identities = 25/50 (50%), Positives = 37/50 (74%)
Query: 75 RLWMRFDKFGNSELMECDKSTIIKRVAIPARDLRILGPVFSHSSNILGKD 124
R W+R D GNS+ +E DK T+++R +PARDLR+L P+F + S ILG++
Sbjct: 50 RSWIRVDTSGNSQAIEVDKFTMMRRCDLPARDLRLLDPLFVYPSTILGRE 99
>Glyma20g35260.2
Length = 320
Score = 55.5 bits (132), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 25/50 (50%), Positives = 33/50 (66%)
Query: 75 RLWMRFDKFGNSELMECDKSTIIKRVAIPARDLRILGPVFSHSSNILGKD 124
R W+ FD G L++ DK I+ RV I ARDLRIL P+ S+ S ILG++
Sbjct: 27 RSWILFDATGQGSLLDVDKYAIMHRVHIHARDLRILDPLLSYPSTILGRE 76
>Glyma20g35260.1
Length = 395
Score = 55.5 bits (132), Expect = 2e-08, Method: Composition-based stats.
Identities = 25/50 (50%), Positives = 33/50 (66%)
Query: 75 RLWMRFDKFGNSELMECDKSTIIKRVAIPARDLRILGPVFSHSSNILGKD 124
R W+ FD G L++ DK I+ RV I ARDLRIL P+ S+ S ILG++
Sbjct: 27 RSWILFDATGQGSLLDVDKYAIMHRVHIHARDLRILDPLLSYPSTILGRE 76
>Glyma10g32350.1
Length = 390
Score = 55.5 bits (132), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 25/50 (50%), Positives = 33/50 (66%)
Query: 75 RLWMRFDKFGNSELMECDKSTIIKRVAIPARDLRILGPVFSHSSNILGKD 124
R W+ FD G L++ DK I+ RV I ARDLRIL P+ S+ S ILG++
Sbjct: 26 RSWILFDATGQGTLLDMDKYAIMHRVQIHARDLRILDPLLSYPSTILGRE 75
>Glyma01g45290.4
Length = 341
Score = 55.1 bits (131), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 22/50 (44%), Positives = 34/50 (68%)
Query: 75 RLWMRFDKFGNSELMECDKSTIIKRVAIPARDLRILGPVFSHSSNILGKD 124
R W+ D G +E++E K I++R +PARDLRIL P+ S+ S +LG++
Sbjct: 19 RQWLVLDGRGETEVVEAGKHAIMRRTGLPARDLRILDPLLSYPSTLLGRE 68
>Glyma01g45290.2
Length = 380
Score = 55.1 bits (131), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 22/50 (44%), Positives = 34/50 (68%)
Query: 75 RLWMRFDKFGNSELMECDKSTIIKRVAIPARDLRILGPVFSHSSNILGKD 124
R W+ D G +E++E K I++R +PARDLRIL P+ S+ S +LG++
Sbjct: 19 RQWLVLDGRGETEVVEAGKHAIMRRTGLPARDLRILDPLLSYPSTLLGRE 68
>Glyma01g45290.3
Length = 378
Score = 55.1 bits (131), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 22/50 (44%), Positives = 34/50 (68%)
Query: 75 RLWMRFDKFGNSELMECDKSTIIKRVAIPARDLRILGPVFSHSSNILGKD 124
R W+ D G +E++E K I++R +PARDLRIL P+ S+ S +LG++
Sbjct: 19 RQWLVLDGRGETEVVEAGKHAIMRRTGLPARDLRILDPLLSYPSTLLGRE 68
>Glyma01g45290.1
Length = 393
Score = 54.7 bits (130), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 22/50 (44%), Positives = 34/50 (68%)
Query: 75 RLWMRFDKFGNSELMECDKSTIIKRVAIPARDLRILGPVFSHSSNILGKD 124
R W+ D G +E++E K I++R +PARDLRIL P+ S+ S +LG++
Sbjct: 19 RQWLVLDGRGETEVVEAGKHAIMRRTGLPARDLRILDPLLSYPSTLLGRE 68
>Glyma11g00440.1
Length = 399
Score = 54.7 bits (130), Expect = 2e-08, Method: Composition-based stats.
Identities = 22/50 (44%), Positives = 34/50 (68%)
Query: 75 RLWMRFDKFGNSELMECDKSTIIKRVAIPARDLRILGPVFSHSSNILGKD 124
R W+ D G +E++E K I++R +PARDLRIL P+ S+ S +LG++
Sbjct: 20 RQWLVLDGKGETEVVEAGKHAIMRRTGLPARDLRILDPLLSYPSTLLGRE 69
>Glyma19g34430.2
Length = 320
Score = 52.8 bits (125), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 22/53 (41%), Positives = 34/53 (64%)
Query: 75 RLWMRFDKFGNSELMECDKSTIIKRVAIPARDLRILGPVFSHSSNILGKDHLF 127
R W+ D +G +++ DK I++ V I ARDLRIL P+ S+ S ILG++ +
Sbjct: 23 RSWILLDHYGKGTVLDADKYAIMRLVQIHARDLRILDPLLSYPSTILGREKVI 75
>Glyma19g34430.1
Length = 388
Score = 52.4 bits (124), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 22/53 (41%), Positives = 34/53 (64%)
Query: 75 RLWMRFDKFGNSELMECDKSTIIKRVAIPARDLRILGPVFSHSSNILGKDHLF 127
R W+ D +G +++ DK I++ V I ARDLRIL P+ S+ S ILG++ +
Sbjct: 23 RSWILLDHYGKGTVLDADKYAIMRLVQIHARDLRILDPLLSYPSTILGREKVI 75
>Glyma03g31600.1
Length = 388
Score = 52.4 bits (124), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 22/53 (41%), Positives = 34/53 (64%)
Query: 75 RLWMRFDKFGNSELMECDKSTIIKRVAIPARDLRILGPVFSHSSNILGKDHLF 127
R W+ D +G +++ DK I++ V I ARDLRIL P+ S+ S ILG++ +
Sbjct: 23 RSWILLDHYGKGTVLDADKYAIMRLVQIHARDLRILDPLLSYPSTILGREKVI 75
>Glyma15g00760.1
Length = 319
Score = 51.2 bits (121), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 22/55 (40%), Positives = 34/55 (61%)
Query: 77 WMRFDKFGNSELMECDKSTIIKRVAIPARDLRILGPVFSHSSNILGKDHLFGFQF 131
WM + G+S L + K +I++R +PARD R+L PV S+ S+ILG++ F
Sbjct: 14 WMVVSETGHSRLEDVGKHSIMRRTGLPARDPRVLDPVLSYPSSILGRERAIVVNF 68
>Glyma02g13080.1
Length = 414
Score = 50.4 bits (119), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 20/50 (40%), Positives = 36/50 (72%)
Query: 75 RLWMRFDKFGNSELMECDKSTIIKRVAIPARDLRILGPVFSHSSNILGKD 124
R W++ + GN + + DK+TI++ ++P+RDLR+L P+F + S ILG++
Sbjct: 49 RSWIKIGQDGNFQTVTLDKATIMRYCSLPSRDLRLLDPMFIYPSTILGRE 98