Jatropha Genome Database

JcCB0171671.10
Show Alignment:  
BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCB0171671.10 + phase: 1 /pseudo/partial
         (220 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma13g27960.1                                                       214   5e-56
Glyma15g11070.1                                                       214   6e-56
Glyma17g02050.1                                                       194   8e-50
Glyma07g38650.2                                                       190   1e-48
Glyma07g38650.1                                                       190   1e-48
Glyma08g26000.2                                                        71   1e-12
Glyma08g26000.1                                                        71   1e-12
Glyma12g15640.1                                                        51   9e-07

>Glyma13g27960.1 
          Length = 274

 Score =  214 bits (545), Expect = 5e-56,   Method: Compositional matrix adjust.
 Identities = 104/141 (73%), Positives = 120/141 (85%)

Query: 65  SLPIEKALKDLLLWIKHDLGPWGPLVLAAVYIPLTILAVPASVLTLGGGYLFGLPVGFVA 124
           +LPIEK +KD LLW+ HDLGPWGPLVLA  YIPLT+LAVPASVLTLGGGYLFGLPVGFVA
Sbjct: 27  TLPIEKMMKDFLLWVDHDLGPWGPLVLAVAYIPLTVLAVPASVLTLGGGYLFGLPVGFVA 86

Query: 125 DSIGATIGATAAFLVGRTIGRSYVMSKLKNYPKFEAVAIAVRKSGFKIXXXXXXXXXXXF 184
           DSIGAT+GA AAFL+GRTIGRS+V+S+LK+YP+F +VAIA+R+SGFKI           F
Sbjct: 87  DSIGATVGAGAAFLLGRTIGRSFVVSRLKDYPQFRSVAIAIRRSGFKIVLLLRLVPLLPF 146

Query: 185 NMLNYLLSVTPVRTKDFMLAS 205
           NMLNYLLSVTPV   ++MLAS
Sbjct: 147 NMLNYLLSVTPVSIGEYMLAS 167


>Glyma15g11070.1 
          Length = 274

 Score =  214 bits (545), Expect = 6e-56,   Method: Compositional matrix adjust.
 Identities = 104/141 (73%), Positives = 120/141 (85%)

Query: 65  SLPIEKALKDLLLWIKHDLGPWGPLVLAAVYIPLTILAVPASVLTLGGGYLFGLPVGFVA 124
           +LPIEK +KD LLW+ HDLGPWGPLVLA  YIPLT+LAVPASVLTLGGGYLFGLPVGFVA
Sbjct: 27  TLPIEKMMKDFLLWVDHDLGPWGPLVLAVAYIPLTVLAVPASVLTLGGGYLFGLPVGFVA 86

Query: 125 DSIGATIGATAAFLVGRTIGRSYVMSKLKNYPKFEAVAIAVRKSGFKIXXXXXXXXXXXF 184
           DSIGAT+GA AAFL+GRTIGRS+V+S+LK+YP+F +VAIA+R+SGFKI           F
Sbjct: 87  DSIGATVGAGAAFLLGRTIGRSFVVSRLKDYPQFRSVAIAIRRSGFKIVLLLRLVPLLPF 146

Query: 185 NMLNYLLSVTPVRTKDFMLAS 205
           NMLNYLLSVTPV   ++MLAS
Sbjct: 147 NMLNYLLSVTPVSIGEYMLAS 167


>Glyma17g02050.1 
          Length = 275

 Score =  194 bits (492), Expect = 8e-50,   Method: Compositional matrix adjust.
 Identities = 94/142 (66%), Positives = 115/142 (80%)

Query: 64  ISLPIEKALKDLLLWIKHDLGPWGPLVLAAVYIPLTILAVPASVLTLGGGYLFGLPVGFV 123
           ++LP++K LKDLL WI  +LGPWGPL L A YIPLT+L+VPASVLTLGGGYLFGLP+GF+
Sbjct: 26  LTLPVDKILKDLLEWIDRNLGPWGPLALIAAYIPLTVLSVPASVLTLGGGYLFGLPIGFI 85

Query: 124 ADSIGATIGATAAFLVGRTIGRSYVMSKLKNYPKFEAVAIAVRKSGFKIXXXXXXXXXXX 183
           ADSIGAT+GA AAFL+GRTIG+S V+S+LK+YP+F  V IA+++SGFKI           
Sbjct: 86  ADSIGATVGAVAAFLLGRTIGKSLVVSRLKDYPQFRLVTIAIQRSGFKISILLRLAPFVP 145

Query: 184 FNMLNYLLSVTPVRTKDFMLAS 205
           FNMLNYLLSVTPV   ++ LAS
Sbjct: 146 FNMLNYLLSVTPVPLGEYTLAS 167


>Glyma07g38650.2 
          Length = 256

 Score =  190 bits (482), Expect = 1e-48,   Method: Compositional matrix adjust.
 Identities = 92/142 (64%), Positives = 115/142 (80%)

Query: 64  ISLPIEKALKDLLLWIKHDLGPWGPLVLAAVYIPLTILAVPASVLTLGGGYLFGLPVGFV 123
           ++LP++K LKDLL WI  +LGPWGPL L A YIPLT+LAVPASVLTLGGGYL+GLP+GF+
Sbjct: 30  LTLPVDKILKDLLEWIDRNLGPWGPLALIAAYIPLTVLAVPASVLTLGGGYLYGLPIGFI 89

Query: 124 ADSIGATIGATAAFLVGRTIGRSYVMSKLKNYPKFEAVAIAVRKSGFKIXXXXXXXXXXX 183
           ADSIGAT+GA A+FL+GRTIG+S V+S+LK+YP+F  V IA+++SGFKI           
Sbjct: 90  ADSIGATVGAVASFLLGRTIGKSLVVSRLKDYPQFRLVTIAIQRSGFKISILLRLAPFVP 149

Query: 184 FNMLNYLLSVTPVRTKDFMLAS 205
           FN+LNYLLSVTPV   ++ LAS
Sbjct: 150 FNILNYLLSVTPVPLGEYTLAS 171


>Glyma07g38650.1 
          Length = 256

 Score =  190 bits (482), Expect = 1e-48,   Method: Compositional matrix adjust.
 Identities = 92/142 (64%), Positives = 115/142 (80%)

Query: 64  ISLPIEKALKDLLLWIKHDLGPWGPLVLAAVYIPLTILAVPASVLTLGGGYLFGLPVGFV 123
           ++LP++K LKDLL WI  +LGPWGPL L A YIPLT+LAVPASVLTLGGGYL+GLP+GF+
Sbjct: 30  LTLPVDKILKDLLEWIDRNLGPWGPLALIAAYIPLTVLAVPASVLTLGGGYLYGLPIGFI 89

Query: 124 ADSIGATIGATAAFLVGRTIGRSYVMSKLKNYPKFEAVAIAVRKSGFKIXXXXXXXXXXX 183
           ADSIGAT+GA A+FL+GRTIG+S V+S+LK+YP+F  V IA+++SGFKI           
Sbjct: 90  ADSIGATVGAVASFLLGRTIGKSLVVSRLKDYPQFRLVTIAIQRSGFKISILLRLAPFVP 149

Query: 184 FNMLNYLLSVTPVRTKDFMLAS 205
           FN+LNYLLSVTPV   ++ LAS
Sbjct: 150 FNILNYLLSVTPVPLGEYTLAS 171


>Glyma08g26000.2 
          Length = 335

 Score = 70.9 bits (172), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 46/138 (33%), Positives = 73/138 (52%), Gaps = 1/138 (0%)

Query: 68  IEKALKDLLLWIKHDLGPWGPLVLAAVYIPLTILAVPASVLTLGGGYLFGLPVGFVADSI 127
           +   L  L ++I+   GP G  +  AVY  L ILA+PA  LT+  G LFG  VG +  SI
Sbjct: 132 VNSFLNHLSVFIE-GYGPAGYALFVAVYAGLEILAIPAIPLTMSAGLLFGSVVGTIIVSI 190

Query: 128 GATIGATAAFLVGRTIGRSYVMSKLKNYPKFEAVAIAVRKSGFKIXXXXXXXXXXXFNML 187
             T+ A+ AFL+ R   R  ++  ++   KF A+  A+ ++GF++           F++ 
Sbjct: 191 SGTVAASVAFLIARYFARERIVKLVEGNKKFVAIDKAIGENGFRVVTLLRLSPLLPFSLG 250

Query: 188 NYLLSVTPVRTKDFMLAS 205
           NYL  +T V+   ++L S
Sbjct: 251 NYLYGLTSVKFIPYVLGS 268


>Glyma08g26000.1 
          Length = 335

 Score = 70.9 bits (172), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 46/138 (33%), Positives = 73/138 (52%), Gaps = 1/138 (0%)

Query: 68  IEKALKDLLLWIKHDLGPWGPLVLAAVYIPLTILAVPASVLTLGGGYLFGLPVGFVADSI 127
           +   L  L ++I+   GP G  +  AVY  L ILA+PA  LT+  G LFG  VG +  SI
Sbjct: 132 VNSFLNHLSVFIE-GYGPAGYALFVAVYAGLEILAIPAIPLTMSAGLLFGSVVGTIIVSI 190

Query: 128 GATIGATAAFLVGRTIGRSYVMSKLKNYPKFEAVAIAVRKSGFKIXXXXXXXXXXXFNML 187
             T+ A+ AFL+ R   R  ++  ++   KF A+  A+ ++GF++           F++ 
Sbjct: 191 SGTVAASVAFLIARYFARERIVKLVEGNKKFVAIDKAIGENGFRVVTLLRLSPLLPFSLG 250

Query: 188 NYLLSVTPVRTKDFMLAS 205
           NYL  +T V+   ++L S
Sbjct: 251 NYLYGLTSVKFIPYVLGS 268


>Glyma12g15640.1 
          Length = 104

 Score = 51.2 bits (121), Expect = 9e-07,   Method: Compositional matrix adjust.
 Identities = 23/31 (74%), Positives = 27/31 (87%)

Query: 109 TLGGGYLFGLPVGFVADSIGATIGATAAFLV 139
            LGGGYLFGLP+GFVA+SIGA +GA A FL+
Sbjct: 10  QLGGGYLFGLPMGFVANSIGAIVGAKATFLL 40