Jatropha Genome Database

JcCB0171531.10
Show Alignment:  
BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCB0171531.10 - phase: 0 /partial
         (131 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma12g02510.1                                                       151   2e-37
Glyma11g10190.1                                                       149   1e-36
Glyma12g02510.2                                                       104   3e-23
Glyma03g07870.1                                                        46   8e-06

>Glyma12g02510.1 
          Length = 513

 Score =  151 bits (381), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 71/113 (62%), Positives = 91/113 (80%)

Query: 3   INKILRSTLKNQLGSHSKHVAASGSSQKHLASAPCLAKLYGTEASLQKDDSTTDSRDGRG 62
           ++ +LRSTL+ +  S   + A S S+Q++L  AP L++   TEASL KD S+ D ++G+G
Sbjct: 1   MHTLLRSTLRTKTASSLAYAAVSRSAQENLLQAPLLSRSNSTEASLAKDTSSNDVKNGQG 60

Query: 63  YKGHDMLAPFTAGWQSTDLHPLVIDKSEGSYVYDINGKKYLDSLAGLWCTALG 115
           +KGH MLAPFTAGWQ+TDLHPLVI+KSEGSYVYDINGKKYLD+LAGLW T+LG
Sbjct: 61  FKGHSMLAPFTAGWQTTDLHPLVIEKSEGSYVYDINGKKYLDALAGLWATSLG 113


>Glyma11g10190.1 
          Length = 513

 Score =  149 bits (375), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 69/113 (61%), Positives = 90/113 (79%)

Query: 3   INKILRSTLKNQLGSHSKHVAASGSSQKHLASAPCLAKLYGTEASLQKDDSTTDSRDGRG 62
           ++ +LRSTL+ +  S   +   S S+ ++L  AP L++   TEASL KD+S+ D ++G+G
Sbjct: 1   MHTLLRSTLRTKTASSLAYAVVSRSAHENLLQAPLLSRSNSTEASLAKDNSSNDVKNGQG 60

Query: 63  YKGHDMLAPFTAGWQSTDLHPLVIDKSEGSYVYDINGKKYLDSLAGLWCTALG 115
           YKGH MLAPFTAGWQS+DLHPL+I+KSEGSYVYDINGKKYLD+LAGLW T+LG
Sbjct: 61  YKGHSMLAPFTAGWQSSDLHPLIIEKSEGSYVYDINGKKYLDALAGLWATSLG 113


>Glyma12g02510.2 
          Length = 490

 Score =  104 bits (259), Expect = 3e-23,   Method: Compositional matrix adjust.
 Identities = 49/88 (55%), Positives = 67/88 (76%)

Query: 3  INKILRSTLKNQLGSHSKHVAASGSSQKHLASAPCLAKLYGTEASLQKDDSTTDSRDGRG 62
          ++ +LRSTL+ +  S   + A S S+Q++L  AP L++   TEASL KD S+ D ++G+G
Sbjct: 1  MHTLLRSTLRTKTASSLAYAAVSRSAQENLLQAPLLSRSNSTEASLAKDTSSNDVKNGQG 60

Query: 63 YKGHDMLAPFTAGWQSTDLHPLVIDKSE 90
          +KGH MLAPFTAGWQ+TDLHPLVI+KSE
Sbjct: 61 FKGHSMLAPFTAGWQTTDLHPLVIEKSE 88


>Glyma03g07870.1 
          Length = 191

 Score = 46.2 bits (108), Expect = 8e-06,   Method: Compositional matrix adjust.
 Identities = 20/28 (71%), Positives = 24/28 (85%)

Query: 93  YVYDINGKKYLDSLAGLWCTALGNDNTF 120
           YVYDINGKKYLD+LAGLW T+L ++  F
Sbjct: 49  YVYDINGKKYLDALAGLWATSLVDNIQF 76